Query= MSMg01no535_p15.b1 MSMg01no535_p15.b1 CHROMAT_FILE:
MSMg01no535_p15.b1 PHD_FILE: MSMg01no535_p15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:57 2005
(651 letters)
>mm_chr6_94483070_94484120
Length = 1051
Score = 1176 bits (608), Expect = 0.0
Identities = 638/648 (98%), Gaps = 2/648 (0%)
Strand = Plus / Plus
Query: 5 gaattctttcccggacctttagtagcttgaaactgctccagcctgccttagccacttcct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttcccggacctttagtagcttgaaactgctccagcctgccttagccacttcct 264
Query: 65 gcttggtggccctgattttggctcctagctgcccactgtgcccggccacctgccatcaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcttggtggccctgattttggctcctagctgcccactgtgcccggccacctgccatcaac 324
Query: 125 tctggaccagcagcgattgtggaagagacctggtagcccactttgctctagctccccctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctggaccagcagcgattgtggaagagacctggtagcccactttgctctagctccccctt 384
Query: 185 ggagagctgcaactttttggcctctctggctgggccagattcccgcagatctttgtgata 244
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 385 ggagagctgcaactttttggcctctctggctgggccagattcctgcagatctttgtgata 444
Query: 245 gcgtct-ggtacgcagcagcctttagtgttaattccccttcactttaccgaaggcaattt 303
| | || ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtg-cttggtacgcagtagcctttagtgttaattccccttcactttaccgaaggcaattt 503
Query: 304 aggcaattatttgttgacctagctaggtttgagtgtggctagtcaggaccagagtctggg 363
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 504 aggcaattatttgttgacctagctaggtttgagtatggctagtcaggaccagagtctggg 563
Query: 364 aatgatggggctgggtcccagagtgcctggggtgttgactcctcggttgtgtggtggcaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aatgatggggctgggtcccagagtgcctggggtgttgactcctcggttgtgtggtggcaa 623
Query: 424 ggcctaggtgccaggcttgcttgagagttgtcagagactggtgtgtggtaggcaggagta 483
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 624 ggcctaggtgccaggcttgcttgagagttggcagagactggtgtgtggtaggcaggagta 683
Query: 484 ggagtgccagcttacagtcagccttctctcccctggtgtgttacttccagtcaagcaaag 543
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 684 ggagtgccagcttacagtcagccttctctccccaggtgtgttacttccagtcaagcaaag 743
Query: 544 tttgttctgttttattccttggtcaaacagggttgagaagttgagccgtgtggcatactg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tttgttctgttttattccttggtcaaacagggttgagaagttgagccgtgtggcatactg 803
Query: 604 ttcgatgagttgaattttcttcctgccaccgagagttgtgtggaacac 651
||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 804 ttctatgagttgaattttcttcctgccaccaagagttgtgtggaacac 851
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no535_p15.g1 MSMg01no535_p15.g1 CHROMAT_FILE:
MSMg01no535_p15.g1 PHD_FILE: MSMg01no535_p15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:57 2005
(517 letters)
>mm_chr6_94647041_94647957
Length = 917
Score = 961 bits (497), Expect = 0.0
Identities = 511/517 (98%), Gaps = 3/517 (0%)
Strand = Plus / Minus
Query: 1 actactgaaaatgcctggtcttagagtggggctgaacagtggctctgtcagttactggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 899 actactgaaaatgcctggtcttagagtggggctgaacagtggctctgtcagttactggga 840
Query: 61 ggtagacacactattgctctctgctaagatttttatctattaatgactgaggcagtttgg 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 839 ggtagacacactattgctctctgctaagatttttatctattaataactgaggcagtttgg 780
Query: 121 ggacattttgggttttttttttttgcatacttaagatggaatattattattattattaaa 180
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 ggacattttggg---gttttttttgcatacttaagatggaatattattattattattaaa 723
Query: 181 taatagaactatgtgggtagagtcagagaatgttctcaagtgttcacttgttggaagact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 taatagaactatgtgggtagagtcagagaatgttctcaagtgttcacttgttggaagact 663
Query: 241 tgcaaagccatgtgtcaggggtgttctgaggaaggctctccgttcccaagccacacttcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tgcaaagccatgtgtcaggggtgttctgaggaaggctctccgttcccaagccacacttcc 603
Query: 301 tggagaggacagagtgctcttatttgtactttctttttgtcacaagacctaccttggctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tggagaggacagagtgctcttatttgtactttctttttgtcacaagacctaccttggctt 543
Query: 361 gcccttccttggagcagaacttgctggtcatttttaggctttcagttgcctacaagtgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gcccttccttggagcagaacttgctggtcatttttaggctttcagttgcctacaagtgac 483
Query: 421 aattcacacagcataaatacctttaaaattgtagtctctcttactcacacaatttagtga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aattcacacagcataaatacctttaaaattgtagtctctcttactcacacaatttagtga 423
Query: 481 tcagtaaataccagactgagtgtcctgggcttcagga 517
||||||||||||||||||||||| |||||||||||||
Sbjct: 422 tcagtaaataccagactgagtgttctgggcttcagga 386
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space: 459849
Effective search space used: 459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
