Query= MSMg01no536_f11.b1 MSMg01no536_f11.b1 CHROMAT_FILE:
MSMg01no536_f11.b1 PHD_FILE: MSMg01no536_f11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:25 2005
(578 letters)
>mm_chr6_119653975_119654952
Length = 978
Score = 1058 bits (547), Expect = 0.0
Identities = 569/579 (98%), Gaps = 5/579 (0%)
Strand = Plus / Plus
Query: 5 gaattcaaaactttcacttcttgagtttcctgtattagtaaagtacaatgttcttaaaga 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaaactttaacttcttgagtttcctgtattagtaaagtacaatgttcttaaaga 264
Query: 65 atgccccatttcctatgcatttgagtgtaggttaataaagtatttctgcctctgatcata 124
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgcccaatttcctatgcatttgagtgtaggttaataaagtatttctgcctctgatcata 324
Query: 125 catatatccaagtaaatttattctttccttagatttattttttaaataaaataaataact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 catatatccaagtaaatttattctttccttagatttattttttaaataaaataaataact 384
Query: 185 aaataaaactttaaaagtgtggatgactgttttgcctacatgcctgtatgtgtagcatgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaataaaactttaaaagtgtggatgactgttttgcctacatgcctgtatgtgtagcatgt 444
Query: 245 gtgtgcctggtgcttgaggaggcgaatgtcagatcgcccagatttggagttgtggacagt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtgtgcctggtgcttgaggaggcgaatgtcagatcgcccagatttggagttgtggacagt 504
Query: 305 tgtgagccgtccgtcatgtgggggttggtaatcacacctggatcattgcaaacgcagcaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtgagccgtccgtcatgtgggggttggtaatcacacctggatcattgcaaacgcagcaa 564
Query: 365 atgctcaggaatgctgagccatcactccggcacctccaaataagctggaatgaatgttat 424
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 565 atgctcaggaatgctgagccatcactccggcacctccaaataagctgtaatgaatgttat 624
Query: 425 acacaaagcaagaatggtacccagaaaccaggatttccagctaatcacttgatttgctgt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acacaaagcaagaatggtacccagaaaccaggatttccagctaatcacttgatttgctgt 684
Query: 485 ctgctacaagtcaggaaaaaaaa-----ccctgaaagtcaatttgaattatcctggtttc 539
||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 685 ctgctacaagtcaggaaaaaaaaaaaaaccctgaaagtcaatttgaattatcctgttttc 744
Query: 540 tgtttcctttctgcaacccaagagaacacattcagttag 578
||||||||||||||||||||| |||||||||||||||||
Sbjct: 745 tgtttcctttctgcaacccaaaagaacacattcagttag 783
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 978
Length adjustment: 10
Effective length of query: 568
Effective length of database: 968
Effective search space: 549824
Effective search space used: 549824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no536_f11.g1 MSMg01no536_f11.g1 CHROMAT_FILE:
MSMg01no536_f11.g1 PHD_FILE: MSMg01no536_f11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:25 2005
(538 letters)
>mm_chr6_119827714_119828650
Length = 937
Score = 215 bits (111), Expect = 7e-60
Identities = 117/119 (98%), Gaps = 1/119 (0%)
Strand = Plus / Minus
Query: 420 gcacatgcctaactcactctacaaagccactccccactccttggtgagctgttttcttgc 479
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 737 gcac-tgcctaactcactctacgaagccactccccactccttggtgagctgttttcttgc 679
Query: 480 tattcagctgcccatgctctctacataccgagtcttatcccctcactcgatgtatggct 538
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tattcagctgcccatgctctctacataccgagtcttatcccctcactcgatgtatggct 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 937
Length adjustment: 10
Effective length of query: 528
Effective length of database: 927
Effective search space: 489456
Effective search space used: 489456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
