NATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCACCTAACAGAACTAACAGGAACCCATTAATTTCTTTGCTGCCTC
CCTTTTATAAAAGTATTTTACTTCCAGCATGCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATCTTTCTCACTCACAC
TTCAAATGTAGACACATCTTGTGCTTTCTCAAAAAAAAAATATATGTCTC
ATCCGCACTAGAAAGTCTAAAAGAGTGAGAGAACACTTTACTATAAATGG
GAAAACATATATACATGGTGAGATAAAGACACATGAAAAAAAAAAATGCG
TAGAAGTTCGAACAGACATTCTCAAGTATGGGAAAGAAAGAGAGAGAAAG
CGTGCATCTCAAAGAAAACAGACAATCTATTTGCGAAGATATATTATAGA
CAAGATATATGATAGTGCGCTGGGGGCACGAATGATAAATAAAAAAATGT
GTGCTTATAGAGAGAAATGTAAAAATACAGTCACACAGATCTTCTAGATG
ACCGAAAAACAGACATGAGATATGGTATGTCTACACAAAACCTAGGTATA
TAACTCTAAACATTTCTGCAAACATTGTGTTAGAATGGTGAACGGAATCT
GTGACATATCATACGAAAAATAAAATTGAAGTGTATAGAAAACATTCTTG
GGGTTGAACACACCTGAGAGGTAGATTAGTACCANACTTATTGCGCAGGA
AGAAGATAAAAAAGCGTTTCTTA

NCCCATGGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTGTTTAGCTCTGTGTTCCATTTTT
TAATTGGGTTATTTGGGTTGTTGGTGTTTAACTCTTGTATTCTTTATAAA
TGTTGGATATAAGCCCTCTGCCAGATGTAGGATTGATGGAGATCCTTTCC
CAATCTGTAGGTTGTTGTTTTATCTTATTGACAATGTCCTTTGCTTTAGA
GAAACTTTCAGTTTCATGAGGTCCCATTTATCAGTTGTTGATCTTAGAGC
CTGAGCTCTTGGTGTTCTCTTCAGGAAATTTTCTCCTGTACCAATGTGTT
AGGGGTTATTTCCCACTTAAGTAGCATAAGACTATCATTCACAATAACTC
TTACCTAGACACTTCTGCACATATGTAGCAGAAGAGTAGTTCATTAATGG
ATTTCTTCTGTGCTAGCATGCATACCAGGTCTTCTCAACCTCATCCCAAT
GAACAGCCTAACGTGTTGAAAACAAACTGGATTACTTCTTGGTAAATGAG
TGTACGCAAAAGGAGACATGAATAGAAAATATACTCTGTATGCTTCTGTG
TAAAAAGAGCACAAAAGCAAGTGTCATAAATCACCTCTACTAAAATAGAT
GTGCTATTGAGAGAAAGAATAGGGCCAGGAATACAGGAGAACCTTCTGGA
ACTGTGACTACAGTCTTCATTTGTGATCTGGGGAAATGTGAAAAGGGGTT
TATGCTTTTCAAATGTAAAGCTGTACAGCTCCTTTGAA

Query= MSMg01no536_i14.g1 MSMg01no536_i14.g1 CHROMAT_FILE:
MSMg01no536_i14.g1 PHD_FILE: MSMg01no536_i14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:40 2005
         (584 letters)



>mm_chr6_74935609_74936592
          Length = 984

 Score =  990 bits (512), Expect = 0.0
 Identities = 564/586 (96%), Gaps = 10/586 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtttagctctgtgttccattttttaattgggttatttgggttgttggtgtttaactctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtttagctctgtgttccattttttaattgggttatttgggttgttggtgtttaactctt 260

                                                                       
Query: 61  gtattctttataaatgttggatataagccctctgccagatgtaggattgatggagatcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtattctttataaatgttggatataagccctctgccagatgtaggattgatggagatcct 320

                                                                       
Query: 121 ttcccaatctgtaggttgttgttttatcttattgacaatgtcctttgctttagagaaact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcccaatctgtaggttgttgttttatcttattgacaatgtcctttgctttagagaaact 380

                                                                       
Query: 181 ttcagtttcatgaggtcccatttatcagttgttgatcttagagcctgagctcttggtgtt 240
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcagcttcatgaggtcccatttatcagttgttgatcttagagcctgagctcttggtgtt 440

                                                                       
Query: 241 ctcttcaggaaattttctcctgtaccaatgtgttaggggttatttcccacttaagtagca 300
           |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 441 ctcttcaggaaattttctcctgtaccaatgtgttcggggctatttcccacttaagtagca 500

                                                                       
Query: 301 taagactatcattcacaataactcttacctagacacttctgcacatatgtagcagaagag 360
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 501 taagactatcattcacaataactcctacctagacacttctgcacatatgtagcagaagag 560

                                                                       
Query: 361 tagttcattaatggatttcttctgtgctagcatgcataccaggtcttctcaacctcatcc 420
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tagttcattagtggatttcttctgtgctagcatgcataccaggtcttctcaacctcatcc 620

                                                                       
Query: 421 caatgaacagcctaacgtgttgaaaacaaactggattacttcttggtaaatgagtgtacg 480
           ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 621 caatgaacagcctaacgtgttgaaaacaaactggattgcttcttggtaaatgagtgaacg 680

                                                                       
Query: 481 caaaaggagacatgaatagaaaatatactctgtatgcttctgtgta-aaaagagcacaaa 539
           ||||||||||||||| |||||||||||||||||||||        | |||||||||||||
Sbjct: 681 caaaaggagacatgagtagaaaatatactctgtatgc--------acaaaagagcacaaa 732

                                                         
Query: 540 agcaagtgtcataaatcacctctactaaaa-tagatgtgctattga 584
           |||||||| |||||||||||||| |||||| ||||| || ||||||
Sbjct: 733 agcaagtgacataaatcacctctgctaaaaatagatatgttattga 778


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space:   559076
Effective search space used:   559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)