NTTTTCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTCACCTGATCCAAACCGAATGGCAGAGAAGCACCTGAAAA
AATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTG
AGATTCCACCTCACACCAGTCAGAATGTCTAAGATCAAAAATTCAGGTGA
CAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTT
GGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTC
CTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCT
GGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCA
CTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCC
AGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACAC
AATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAG
CCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCA
CAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATATTAGTCCAA
AACCTAGGATACCCAAGATATAAGATACAATTTCCTTAAACACTTTGAAC
TCNNAGAAAATGAAGACTGAAGTGTGGACACTATGCCCCTCCTTTAAAGT
GGGAACAAAACACCTTGTGAAGGAATACAGAGACAAAGTTTGTAGCTG

NNNNCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCTCTCCTGGACATCCCTGAATG
GTAGAAGTCAACTAGTCTCCCATGCTCTCTCTCTCTCCTCTAAATAATAA
AAGTCAACACGCTCACGCACACACACACACACACACACACACACACACAC
ACACACACACACGCACGCACACCACCACCACCACCAGTATCATTGTGCAA
AATACATTTGGGGCTGATTAAAAAATAACTTTGTCATAACGGAGCCCCAA
TCAAACTGTGAGCATTAACTAATTAAGCAAAATGATTACACATTAGTCAC
AGCATTTTTACACAAAGAATTGTTATTCCTCTCACCCCCTCTCCCCGACT
CTCCAAGCGCACAGGGAAACACACAGGCATGGGTGTGCTCGCGCGCGCAC
GCGCACGCACACACACACACACATACACACTCACTCACACACAACAATCA
GGCATTGTTCTAAGGGAAGAAAAGCAACTTTGACAGATTGAAATATAGCA
GAGGCCCCTTCAAGGAAACCTGTAAACAGGCTGTCACTCACTCTGTCCGG
CTCAGTGCTAGCTTGCTTTCCACAAAGTGCTCTGAATGTCCTGGNCACCC
AGGCAAAGTTTCTGTAGCTTCAAACTCCAGAAAACANGCGTGGAGGAGAG
CANGTATCTGCATGCCAGACACANCGAGCAGGACCGCNAGGAAATCTCAA
ACCCCAACCAGAGATGGCCTGGACCAGTCACTGTTCTGC

Query= MSMg01no536_m21.g1 MSMg01no536_m21.g1 CHROMAT_FILE:
MSMg01no536_m21.g1 PHD_FILE: MSMg01no536_m21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:01 2005
         (477 letters)



>mm_chr6_144158022_144158898
          Length = 877

 Score =  803 bits (415), Expect = 0.0
 Identities = 460/497 (92%), Gaps = 36/497 (7%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctctcctggacatccctgaatggtagaagtcaactagtctcccatgctctctctctctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 tctctcctggacatccctgaatggtagaagtcaactagtctcccatgctctctctctctc 276

                                                                       
Query: 61  ctctaaataataaaagtcaacacgctcacgcacacacacacacacacacacacacacaca 120
           ||||||||||||||||||||||||||||||      ||||||||||||||||||||||||
Sbjct: 277 ctctaaataataaaagtcaacacgctcacg------cacacacacacacacacacacaca 330

                                                                       
Query: 121 cacacacacacacacgcacgcacaccaccaccaccaccagtatcattgtgcaaaatacat 180
           |||||||||          |||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 cacacacac----------gcacaccaccaccaccaccagtatcattgtgcaaaatacat 380

                                                                       
Query: 181 ttggggctgattaaaaaataactttgtcataacggagccccaatcaaactgtgagcatta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttggggctgattaaaaaataactttgtcataacggagccccaatcaaactgtgagcatta 440

                                                                       
Query: 241 actaattaagcaaaatgattacacattagtcacagcatttttacacaaagaattgttatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actaattaagcaaaatgattacacattagtcacagcatttttacacaaagaattgttatt 500

                                                                       
Query: 301 cctctcaccccctctccccgactctccaagcgcacagggaaacacacaggcatgggtgtg 360
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 cctctcaccccctctccccgactctccaagcgcacagggaaacacactggcatgggtgtg 560

                                                                       
Query: 361 ctcgcgcgcgcacgcgcacgcacacacacacacaca--------------------taca 400
           ||||||||||||||||||||||||||||||||||||                    ||||
Sbjct: 561 ctcgcgcgcgcacgcgcacgcacacacacacacacacacacacacacacacacacataca 620

                                                                       
Query: 401 cactcactcacacacaacaatcaggcattgttctaagggaagaaaagcaactttgacaga 460
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cactcactcacacacaacaatcaggcattgttctaagggaagaaaagcaactttgacaga 680

                            
Query: 461 ttgaaatatagcagagg 477
           |||||||||||||||||
Sbjct: 681 ttgaaatatagcagagg 697


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 76
Number of extensions: 25
Number of successful extensions: 25
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 8
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space:   404889
Effective search space used:   404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)