Query= MSMg01no537_c09.b1 MSMg01no537_c09.b1 CHROMAT_FILE:
MSMg01no537_c09.b1 PHD_FILE: MSMg01no537_c09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:27 2005
(456 letters)
>mm_chr6_28249718_28250573
Length = 856
Score = 882 bits (456), Expect = 0.0
Identities = 456/456 (100%)
Strand = Plus / Plus
Query: 1 ccgaatggctgagaagcacctgaaaaaatgtaaaggacccattcttgtgcagaccagtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccgaatggctgagaagcacctgaaaaaatgtaaaggacccattcttgtgcagaccagtgt 260
Query: 61 gtgtctgtccagaagttggcgtttcactacccttctccatacttcaggctcaatccacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgtctgtccagaagttggcgtttcactacccttctccatacttcaggctcaatccacca 320
Query: 121 tctctttacaggcagtgtgcctgttctttggatgagaggggtttatttctcgtttcttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctctttacaggcagtgtgcctgttctttggatgagaggggtttatttctcgtttcttca 380
Query: 181 acttagtatgttttcaggattcatacaaactgtagcatatacttcacttctgttgaatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acttagtatgttttcaggattcatacaaactgtagcatatacttcacttctgttgaatgg 440
Query: 241 caaatgctacttaatgttttgactatagaccatattttgtttatcctttgttggacatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caaatgctacttaatgttttgactatagaccatattttgtttatcctttgttggacatat 500
Query: 301 gggttgtttccaattatagaatactataaataatgttggcatgaacctttgtgtagaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggttgtttccaattatagaatactataaataatgttggcatgaacctttgtgtagaagt 560
Query: 361 ttcttttagaacatatattttaatctttcttgggtgtattccaaggagtagaattcccca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttcttttagaacatatattttaatctttcttgggtgtattccaaggagtagaattcccca 620
Query: 421 atcagctaatattctacaactgttcactattgacat 456
||||||||||||||||||||||||||||||||||||
Sbjct: 621 atcagctaatattctacaactgttcactattgacat 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_c09.g1 MSMg01no537_c09.g1 CHROMAT_FILE:
MSMg01no537_c09.g1 PHD_FILE: MSMg01no537_c09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:27 2005
(474 letters)
>mm_chr6_28398517_28399393
Length = 877
Score = 884 bits (457), Expect = 0.0
Identities = 471/477 (98%), Gaps = 3/477 (0%)
Strand = Plus / Minus
Query: 1 ccaccttttttcctccatccaggtagctcaccagcaggctcattgtctgctctgtctccc 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 677 ccaccttttttcctccatccaggtagctcaccagcaggctcattgtcttctctgtcttcc 618
Query: 61 atactatccccatgtctttgtgtggccagactcaactttctccctcctctgtctttacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 atactatccccatgtctttgtgtggccagactcaactttctccctcctctgtctttacag 558
Query: 121 ctatgcactttcctgctcttccaaccccttaacctattttttcatctattgagtgtcagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ctatgcactttcctgctcttccaaccccttaacctattttttcatctattgagtgtcagg 498
Query: 181 c---ttttttttctgacaagttatcatgtatactggtgccatgtgggaggctactggaaa 237
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ctttttttttttctgacaagttatcatgtatactggtgccatgtgggaggctactggaaa 438
Query: 238 cagggtttctgtgagtttctgtttgtgggcatgattaattggggtttggagggtttttgt 297
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 437 cagggtttctgtgagtttctgtttgtgggcatgattcattggggtttggagggtttttgt 378
Query: 298 tttgttttttagatttggatattgaacctgtgtttcacagtgactttgacccttggttac 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tttgttttttagatttggatattgaacctgtgtttcacagtgactttgacccttggttac 318
Query: 358 ttgggaagataaacccttgtgaaggattcaggactaggctggtagtctcagcctgtatcc 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ttgggaagataaacccttgtgaaggattcaggactaggctggtagtctcagcctgtatcc 258
Query: 418 tctacccttcacattcctagcacaaccttcctccctccatttctttaatagcaagta 474
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tctacccttcacattcctagcacaaccttcctccctccatttctttaatagcaagta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 877
Length adjustment: 10
Effective length of query: 464
Effective length of database: 867
Effective search space: 402288
Effective search space used: 402288
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
