CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCAGGGCTCACAAGAGGGAGTGGGTGGGTTGGGGAGCAGGGTGGGG
GGCGAGGGTATAGGGGGCTTTGGGGAAAGCATTTGAAATGTAAATGAAGA
AAATATCTAATTAAAAAAGAAAGAAAAAAAATATAAAAATAAATAAATAA
ACTAAAAAAAATACTATCCTGAATAATAAAAGAACTGCTTGATGTATCAC
CACTCCCAATGTCAAGTTGTATGTCTATGATATTGGCACAAAAACAGACA
CATTAATGAATGGAATTGATATGAATACCCAGACATAAATCTACATGTAC
CTATGGACATCTGATTTTTTATAAAGAAGCCAGAAATAAATACACACTGG
AAAAAAGGCAGCATCTTCAACATGTGGTGCTGGCTAACCTCCTGTCGAAG
AACACAAGTAAATGTCTGCAAATAGACCCATATTTAGCACCATGAACAAA
ACTCAAGTCCAAGTGGGATAAAAGAACCTCAACATAAAAACGAGGATATT
TCCTAAAAAACTGGAATAAAAAAGTAAAATTGGGGGAAAAAAGGCGCTTG
TTGATCTCTTCTTTTGGGGGCGGGGGAAAACAAAAACCTCTCTTTTTTAT
AAAAAAAAAAAAAAAAACTNCNGAATTTNTNNTTGAATGTTCGGNTGCAC
CCCTCTTTGTACNNTCTGTTTGATTTTATTTCATTGATCTTAATGCAACN
TTTATATTGATGTTTTTTCGTTCACCTCTTATCACTANTGTTATCG

TGCATGGTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATTTTGTAGACCAGGCTGGCCTCG
AACTCAGAAATCTGCCTGCCTCTGCATGTTTCCTGTATTTTACAGTGAAG
CAGCCTCTATTTTTCTCTCTGTTCTCATGAGAGTTGGGCATATTCTGTTC
TGTTAAATCTTTGATTTGTCACTTTCCCACTTACTTAGACACCACTTTCA
AACACGGGTACTTCCTTCTACAAACTAACTTTATTGTCATTGTTTGGGAT
TAGAAGTGTTTGCTAAGGGCATTGCTTGTATTTCAACCAGTGCAGCCATG
TTGCTGGATTAAAATCCCTATACGCAAATAATATTTATCTTTCCCTATAA
AGGGTCTGATGCCATTTGGCTTCTCTTGAACTCCTTTCCATCTTGTTTCC
CTACATATGTTTTCTTGCCAGAAAGTGGGGATTAGCATTAGGTTCCGTGG
TAGGTAGTTCTCAATACGAAACGCACCTTGTAAAACCTTCTTCTAGTTTT
TCTCTAGGCCTAACGCTCCCACACTTTCTGTTGCCTTTCTCGAGTGAAAT
ATACTGATTAAAGTTAGAAGTTGGGGCTGGAGAGATGGCTCAGCACTGCA
AAGCACTGAAGACCTGAGTTCTAGTGACAGAACCCACATGACAGTCACAC
CCATTTGTAAGTCTAGCGCCAGGAAATCTAGTGCCTTCTTTGGC

Query= MSMg01no539_o14.g1 MSMg01no539_o14.g1 CHROMAT_FILE:
MSMg01no539_o14.g1 PHD_FILE: MSMg01no539_o14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:19:02 2005
         (668 letters)



>mm_chr6_4971612_4972679
          Length = 1068

 Score = 1253 bits (648), Expect = 0.0
 Identities = 663/668 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   attttgtagaccaggctggcctcgaactcagaaatctgcctgcctctgcatgtttcctgt 60
           |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 201 attttgtagaccaggctggcctcgaactcagaaatccgcctgcctctgcctgtttcctgt 260

                                                                       
Query: 61  attttacagtgaagcagcctctatttttctctctgttctcatgagagttgggcatattct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attttacagtgaagcagcctctatttttctctctgttctcatgagagttgggcatattct 320

                                                                       
Query: 121 gttctgttaaatctttgatttgtcactttcccacttacttagacaccactttcaaacacg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttctgttaaatctttgatttgtcactttcccacttacttagacaccactttcaaacacg 380

                                                                       
Query: 181 ggtacttccttctacaaactaactttattgtcattgtttgggattagaagtgtttgctaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtacttccttctacaaactaactttattgtcattgtttgggattagaagtgtttgctaa 440

                                                                       
Query: 241 gggcattgcttgtatttcaaccagtgcagccatgttgctggattaaaatccctatacgca 300
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 gggcattgcttgtatttcaaccagagcagccatgttgctggattaaaatccctatacgca 500

                                                                       
Query: 301 aataatatttatctttccctataaagggtctgatgccatttggcttctcttgaactcctt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aataatatttatctttccctataaagggtctgatgccatttggcttctcttgaactcctt 560

                                                                       
Query: 361 tccatcttgtttccctacatatgttttcttgccagaaagtggggattagcattaggttcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccatcttgtttccctacatatgttttcttgccagaaagtggggattagcattaggttcc 620

                                                                       
Query: 421 gtggtaggtagttctcaatacgaaacgcaccttgtaaaaccttcttctagtttttctcta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtggtaggtagttctcaatacgaaacgcaccttgtaaaaccttcttctagtttttctcta 680

                                                                       
Query: 481 ggcctaacgctcccacactttctgttgcctttctcgagtgaaatatactgattaaagtta 540
           ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 681 ggcctaacgctcccacactttctgttgcctttctccagtaaaatatactgattaaagtta 740

                                                                       
Query: 541 gaagttggggctggagagatggctcagcactgcaaagcactgaagacctgagttctagtg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaagttggggctggagagatggctcagcactgcaaagcactgaagacctgagttctagtg 800

                                                                       
Query: 601 acagaacccacatgacagtcacacccatttgtaagtctagcgccaggaaatctagtgcct 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 acagaacccacatgacagtcacacccatttgtaagtctagcgccaggaaatctagtgcct 860

                   
Query: 661 tctttggc 668
           ||||||||
Sbjct: 861 tctttggc 868


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space:   696164
Effective search space used:   696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)