TCCTCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCCAGGACCATTAAGTAGGACTGGGTGGGTTGGTGAGCAGGG
GAAGTGGGGAGGGTATAGTGGGTTTTCAGAGTGGAAACGAGGAGAGAGGA
TAACATTTGAAATGTAAATAAAGAAAATATCTAAGTATAAAAAGGAAAAA
AGAAAAAAATAACTACTTGTCATTAGAAGGGAAGGGGGGTGGGAAAGATT
TACAAAAATTGAAGTTATTTTGTTCTAGCCAATAATCTACTAAACACTTG
CCATGAAGTATATAACACCAAAATACAACTCATATTACACAGTCTCATGA
TTCATATATTTTTCTTTCTCTTATCAAACTTATTTCCTTCTAAGTATATT
TTTGTAGTTGATGAAATTTGTACCTTACACATTTGACTTCTGAGTCGAAA
ACATTCAGGTTTTGTGACCTCTTTCAGTTCCCATAAATCAATATAAATTG
ATTATTTTAACTGACTCCTATTCTACTATTTAATATACCTCTGGATCACT
TCTCTTCCTTTGCCCCCTCTTTTCCCAGTTCCTTCTCATCAGCCTCCCTT
ATCATTCTTTTTCCCCTTCCCCCCTTCTCCTTTCCTCTTGTATCTTTCCT
CTTTCCATTTCCCCATCACTTTTACCCTTTTTTTTTTTCCAACCCGTTTA
TTCCCACTTCCCCTTGTTGTCCATCCCACTTCTCTTCTTTAACCTCAACC
GTCATTTCTCTTTCTCTGAAAATTCATGATCTG

NTTTCCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTAAGAACATACTGTTA
GTTATAAAATACAACAGCAGACTTCCACAGAATAGATAACTAGGGAGAAG
ACAAAGAATAATGATTCAAAATAATTATAACCAATCTGAATAAATAAATA
TTTGACTCTCAAAATAAAAATAATCCCTATTTTCTATTCAGCCTCAGTAT
TTCTGTACTTTGTCTCCATTGAATGATTTAAGTTTCAGTAATGATTGTGA
GAAGGGTATCCTTTAGGAAGCAAAAGTGAAATGTTGAGTTCTGAATTTGC
ATGCCTGTTAGGATAATTCAATGGGGATTTCCCGGACCTTATCTATGTTC
TGTGTGGTTTTGTAGTTGGGACTCATATCCTACAACATGGACTGAAGAGG
ACAAGGTGTACTTTACATGGTGAAATATTGAAATGGCAAATTGATTGATG
CAGAATAAGCAGTTAGGGTTGAAAGTAAGAACAAAGCCTAAGAAACCCAA
CTCACTTTAAAAATAAAGTGATTTTTTTCCCTAATAAAAGTCCATAGAGA
CTGTAAGGTACTGATGAAACTTACTTTAGAGCAAAACAATAAAAAAAGAG
CAGAATATACTAGTCGGAGGCCATGTGAATCAACATACTGAAGGGCCCAA
ATTATTCTTTAAGGCTTCTTTTTATGAATTTCAAGAGGAATGCTN

Query= MSMg01no541_i11.g1 MSMg01no541_i11.g1 CHROMAT_FILE:
MSMg01no541_i11.g1 PHD_FILE: MSMg01no541_i11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:13 2005
         (656 letters)



>mm_chr6_76099881_76100936
          Length = 1056

 Score = 1261 bits (652), Expect = 0.0
 Identities = 655/656 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctaagaacatactgttagttataaaatacaacagcagacttccacagaatagataactag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 ctaagaacatactgttagttataaaatacaacagcagacttccacagaatagataactag 797

                                                                       
Query: 61  ggagaagacaaagaataatgattcaaaataattataaccaatctgaataaataaatattt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 ggagaagacaaagaataatgattcaaaataattataaccaatctgaataaataaatattt 737

                                                                       
Query: 121 gactctcaaaataaaaataatccctattttctattcagcctcagtatttctgtactttgt 180
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 gactttcaaaataaaaataatccctattttctattcagcctcagtatttctgtactttgt 677

                                                                       
Query: 181 ctccattgaatgatttaagtttcagtaatgattgtgagaagggtatcctttaggaagcaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 ctccattgaatgatttaagtttcagtaatgattgtgagaagggtatcctttaggaagcaa 617

                                                                       
Query: 241 aagtgaaatgttgagttctgaatttgcatgcctgttaggataattcaatggggatttccc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 aagtgaaatgttgagttctgaatttgcatgcctgttaggataattcaatggggatttccc 557

                                                                       
Query: 301 ggaccttatctatgttctgtgtggttttgtagttgggactcatatcctacaacatggact 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ggaccttatctatgttctgtgtggttttgtagttgggactcatatcctacaacatggact 497

                                                                       
Query: 361 gaagaggacaaggtgtactttacatggtgaaatattgaaatggcaaattgattgatgcag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gaagaggacaaggtgtactttacatggtgaaatattgaaatggcaaattgattgatgcag 437

                                                                       
Query: 421 aataagcagttagggttgaaagtaagaacaaagcctaagaaacccaactcactttaaaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aataagcagttagggttgaaagtaagaacaaagcctaagaaacccaactcactttaaaaa 377

                                                                       
Query: 481 taaagtgatttttttccctaataaaagtccatagagactgtaaggtactgatgaaactta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 taaagtgatttttttccctaataaaagtccatagagactgtaaggtactgatgaaactta 317

                                                                       
Query: 541 ctttagagcaaaacaataaaaaaagagcagaatatactagtcggaggccatgtgaatcaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ctttagagcaaaacaataaaaaaagagcagaatatactagtcggaggccatgtgaatcaa 257

                                                                   
Query: 601 catactgaagggcccaaattattctttaaggcttctttttatgaatttcaagagga 656
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 catactgaagggcccaaattattctttaaggcttctttttatgaatttcaagagga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space:   675716
Effective search space used:   675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)