TTTAAGCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCCCTTGTACCCCCAGCTCTGGGGAGGCAGAGATAGGATGG
TCCCTGTGTTTGCTGGGCTAGCCAACCAAGCTAGCCTAACCACCAAGCTC
CCTGTCAGCAACACACCTTGGTCTAACAGTGGGATGTNGGACAGCACCGA
GTAACAAAGAGCATGAGAGGAAAGGTACCTGAGATCTGCCTCTTTTCATT
GCACAAGACACACACACACACACTCACACACATGGTACACACACCATTCA
CCACATACACCCATTTTACCCCAACCCTTCCCCCCTTATGAACCCCACCT
GGCACACACCCTTTCCCCCCCCTCCCACCTTACCCCCATGGGCCTTTAAA
ACCCCCCTGTTGGTTATTTACCCTATACCCCCAGGTTAAAAAAAACCCAC
AACAAAATAACTTTTTTTTTTTTCCCCCCCTTTTATCCCGGGGGGCCCAA
CACCTTTTTTCAAATAAAAAAAACACTTTTTTTCACCCCCACCCCCCCCA
ACCCCTTTTTTTTTTATCTAAATATTCNCCCCCTTTTTTTTACATACACA
CATGGGGTTTTTTTTTCCCCCCCCCCCCCCCCCTCATTTTTATACACCCC
GGGTGGTGCTCTCCATTAATTACCACTACTTCTCCTTCCTGGTCCCCCCC
TGTTTTTTTTTC

CACTATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCTTTAGAAAGGAAGTGCAGCAC
TCTGCATTGTGGCTCCTCCACCCAGGAGTGTTTCTTTTGCCACCCCACAG
AGGCAAAACAAACAGAAGCTGGGGCTCACTTCAGGTCAGCTTTGACTTCT
GCCCTGAATTCTGTTTGCTTTGGTCTGTGCTGTTTCCACTGGTGACAGGC
ATGTCCCCATGATCTTTTCTAAGTGCATACAGGCTCTACTTTGTAAATTG
ATGAGATGTGGATTACAGAGCAAGAGACAGGGGTCAACTAACTCTGTCCA
CAGGTAGAAACCAGGAAAAAGCTAGGGCTCATGGGAAACCCATTGTCACT
TTTTTTCTGGGCTGGACTCTGTTGCCCTATATAATGGCCACATTTGAAAC
TTTTGACAGAGTAGCTCATCAGATAAAGGGTAGGCTTGGATATGATGATC
CAAGTGCAGTTCCCTGCAGACTCTTCTGGTCCAAGTTTCTGCTATACTAA
CTACAGATGAAAGAATTATTTGAAGAGAAAAATGGCCCCAAACAGAAAGA
AGGGAAGGAAAGAAGGAAGGAATGAATGGACGGATGGAGGGTAGCACGCC
ACTTCTCCCTTCTTATATATTTTTTTTTTGCACCTACTTTTTTTTTTTAA
GCTTGTTGGTCAATACTAAATATCTTTGCGTTCCTCATACTTTTTTTTTT
TATCCACCTCACACCCTTGTTAT

Query= MSMg01no541_p20.g1 MSMg01no541_p20.g1 CHROMAT_FILE:
MSMg01no541_p20.g1 PHD_FILE: MSMg01no541_p20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:52 2005
         (513 letters)



>mm_chr6_143965318_143966230
          Length = 913

 Score =  984 bits (509), Expect = 0.0
 Identities = 512/513 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctttagaaaggaagtgcagcactctgcattgtggctcctccacccaggagtgtttcttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctttagaaaggaagtgcagcactctgcattgtggctcctccacccaggagtgtttcttt 260

                                                                       
Query: 61  tgccaccccacagaggcaaaacaaacagaagctggggctcacttcaggtcagctttgact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgccaccccacagaggcaaaacaaacagaagctggggctcacttcaggtcagctttgact 320

                                                                       
Query: 121 tctgccctgaattctgtttgctttggtctgtgctgtttccactggtgacaggcatgtccc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgccctgaattctgtttgctttggtctgtgctgtttccactggtgacaggcatgtccc 380

                                                                       
Query: 181 catgatcttttctaagtgcatacaggctctactttgtaaattgatgagatgtggattaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catgatcttttctaagtgcatacaggctctactttgtaaattgatgagatgtggattaca 440

                                                                       
Query: 241 gagcaagagacaggggtcaactaactctgtccacaggtagaaaccaggaaaaagctaggg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagcaagagacaggggtcaactaactctgtccacaggtagaaaccaggaaaaagctaggg 500

                                                                       
Query: 301 ctcatgggaaacccattgtcactttttttctgggctggactctgttgccctatataatgg 360
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 ctcatgggaaacccattgtcactttttttctgggctggactctgttgtcctatataatgg 560

                                                                       
Query: 361 ccacatttgaaacttttgacagagtagctcatcagataaagggtaggcttggatatgatg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccacatttgaaacttttgacagagtagctcatcagataaagggtaggcttggatatgatg 620

                                                                       
Query: 421 atccaagtgcagttccctgcagactcttctggtccaagtttctgctatactaactacaga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atccaagtgcagttccctgcagactcttctggtccaagtttctgctatactaactacaga 680

                                            
Query: 481 tgaaagaattatttgaagagaaaaatggcccca 513
           |||||||||||||||||||||||||||||||||
Sbjct: 681 tgaaagaattatttgaagagaaaaatggcccca 713


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space:   454209
Effective search space used:   454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)