Query= MSMg01no542_b24.b1 MSMg01no542_b24.b1 CHROMAT_FILE:
MSMg01no542_b24.b1 PHD_FILE: MSMg01no542_b24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:03 2005
(575 letters)
>mm_chr6_115441747_115442721
Length = 975
Score = 1060 bits (548), Expect = 0.0
Identities = 566/572 (98%)
Strand = Plus / Plus
Query: 4 ggaattcatataaaaagttggatcgatagcatgcatctgtaatcccaactcatgatgaga 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatataaaaagttggatcgatagcatgcatctgtaatcccaactcatgatgaga 263
Query: 64 caggaggcagagacaagacaatgtccaggaagctctcagcccagttagctggaatattca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 caggaggcagagacaagacaatgtccaggaagctctcagcccagttagctggaatattca 323
Query: 124 cagcagtagagacaagaaaaaccctgcttcaaaaggttgcaagtcaagaaccagctcaca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cagcagtagagacaagaaaaaccctgcttcaaaaggttgcaagtcaagaaccagctcaca 383
Query: 184 aaagctgtcttctgacctctacacacaaataaataagaagataattatttttaagacgtt 243
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 384 aaagctgtcttctgacctctacacacaaataaataaaaaaataattatttttaagacgtt 443
Query: 244 aaagagtctgccaaaatgagcttatcattcaattaagaagaaaaacatgactctttctta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaagagtctgccaaaatgagcttatcattcaattaagaagaaaaacatgactctttctta 503
Query: 304 aaacagtataatgcgggtaactaattgtgtgctggatgaatggttggggctcttggtcac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaacagtataatgcgggtaactaattgtgtgctggatgaatggttggggctcttggtcac 563
Query: 364 atgctaggggaccgtttgtggggaagcgaagattcacaaagactgacaagtcagggtgga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 atgctaggggaccgtttgtggggaagcgaagattcacaaagactgacaagtcagggtgga 623
Query: 424 acctgtggactcaggcaggcctcgggatggtgctgaattgaggctctgcaagaaagacaa 483
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 624 acctgtggactcaggcaggcctcaggatggtgctgaattgaggctctgcaagaaagacaa 683
Query: 484 caaaaggcattacaggaaaaaaaaccagaaagaacaaccgagcagaagaggggagggtct 543
||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 684 caaaaggcattacaggaaagaaagccagaaagaacaaccgagcagaagaggggagggcct 743
Query: 544 tgctgctccctggccctagatatagacagcag 575
||||||||||||||||||||||||||||||||
Sbjct: 744 tgctgctccctggccctagatatagacagcag 775
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space: 545225
Effective search space used: 545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no542_b24.g1 MSMg01no542_b24.g1 CHROMAT_FILE:
MSMg01no542_b24.g1 PHD_FILE: MSMg01no542_b24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:03 2005
(633 letters)
>mm_chr12_98304303_98305336
Length = 1034
Score = 1141 bits (590), Expect = 0.0
Identities = 623/634 (98%), Gaps = 1/634 (0%)
Strand = Plus / Minus
Query: 1 acatatcttactaagactctcccttacatttggagcattcagtaagaatgagcatataat 60
|||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 834 acatatcttagtaagactctcccttacatttggagcattcagtaagaatgatcatataat 775
Query: 61 ttgggatgtgttaatagccagaggaattctccttttgcaattataaatgggtaggaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 ttgggatgtgttaatagccagaggaattctccttttgcaattataaatgggtaggaagga 715
Query: 121 agctctttctaaccatttgaagtcataagtgggcatgctatattaaggataatttgaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 714 agctctttctaaccatttgaagtcataagtgggcatgctatattaaggatattttgaagt 655
Query: 181 gcttggtatgtatcactcatacattgttaagtatgctggtatttctttctgctctgtgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 gcttggtatgtatcactcatacattgttaagtatgctggtatttctttctgctctgtgaa 595
Query: 241 ctgtgagagaccatgttgttgagctgtatcagccaaaaggagagaagtcagcaatactga 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 594 ctgtgagagaccatgttgttgagctgtatcagccaaaaggagagaagtcagcaatattga 535
Query: 301 gttacaactaagattgaaacaaggatgataatttccaaggcaaaaaatgaaggttaatgc 360
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 534 gttactactaagattgaaacgaggatgataatttccaaggcaaaaaatgaaggttaatgc 475
Query: 361 cacagaaagactgtctagcgctatctttatgaaccttttattctagaaagactaccacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 474 cacagaaagactgtctagcgctatctttatgaaccttttattctagaaaaactaccacaa 415
Query: 421 agttactgtgatccaaggtgagagtctagacttgacatctgtatgccaaatatctacata 480
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 agttactgtgatccaaggtaagagtctagacttgacatctgtatgccaaatatctacata 355
Query: 481 ccaggtgtcagggtcatggaatatgtgcttagccatcctcaggaatatatttaacaattt 540
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 354 ccaggtgtcagggtcatggaatatatgcttagccatcctcaggaatatatttaacaattt 295
Query: 541 tcaaatgtgtctaaatcaaaagcacaaaat-ttttggtagatagaaagaaataggtatga 599
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 294 tcaaatgtgtctaaatcaaaagcacaaaatgttttggtagatagaaagaaataggtatga 235
Query: 600 aaatatcccattgatttgagttaattctttgagt 633
||||||||||||||||||||||| ||||||||||
Sbjct: 234 aaatatcccattgatttgagttagttctttgagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1034
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1024
Effective search space: 637952
Effective search space used: 637952
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
