Query= MSMg01no542_f02.b1 MSMg01no542_f02.b1 CHROMAT_FILE:
MSMg01no542_f02.b1 PHD_FILE: MSMg01no542_f02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:19 2005
(645 letters)
>mm_chr6_127859216_127860260
Length = 1045
Score = 1139 bits (589), Expect = 0.0
Identities = 628/641 (97%)
Strand = Plus / Minus
Query: 4 ggaattccagtgctggctccagctagtcctgcccccagaatcaatgcgatgattaaagag 63
|||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||
Sbjct: 844 ggaattccagtgctggctccagctagtcctgccctcagaatcaatgctaagattaaagag 785
Query: 64 atagcttctctcttctgtctcataaggcctccccaagtttgtcctatgaatgctctcagc 123
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 784 atagcttctctcttctgtctcataaggccttcccaagtttgtcctatgaatgctctcagc 725
Query: 124 gctgtttcctctggttacgcaaggcattcattgaaccaagatacagaatccatctggggt 183
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 724 gctgtttcctctggttacgcaagacattcattgaaccaagatacagaacccatctggggt 665
Query: 184 agaagaattaagaacctcccagttcacacaaggggtcagttctgttgaacaggcccacca 243
|||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 664 agaagaattaagaacctctcagttcacacaaggggtcagtcctgttgaacaggcccacca 605
Query: 244 tgcctgttctgttgggggataacccatttggaatggacgatggcgatggtccagttgttc 303
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 604 tgcctgttctgttgggggataacccatttggaatggacgatggcgatggtccggttgttc 545
Query: 304 agcagggagttctagaacagagaagctctgccaatggatgtctggtggtacggtagttgt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 agcagggagttctagaacagagaagctctgccaatggatgtctggtggtacggtagttgt 485
Query: 364 tggtctagaagatgctgagactagtactgatttagggggtgctagaatctgacttgggcc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tggtctagaagatgctgagactagtactgatttagggggtgctagaatctgacttgggcc 425
Query: 424 gactgtcgctgatgacttgccttattaggagtttgagtgtaaagagtaacctgggattgt 483
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gtctgtcgctgatgacttgccttattaggagtttgagtgtaaagagtaacctgggattgt 365
Query: 484 aaccccggataatgtggaaccagaggcaccaagattttctgacttcccatcccttgactt 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 364 aaccccggataatgtggaaccagaggcaccaagattttctgacttcccatcccttggctt 305
Query: 544 gttctcccttgtcagtgatcctgagcagaacactggagctgtctccttgtcaggaaactg 603
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 304 gttctcccttgtcagtgatcctgagcagaacactggagctgtctccttgtcgggaaactg 245
Query: 604 tgataagatcttcttttaacaccctccatccccaacttctg 644
|||||||||||||||||||||||| ||||||||||||||||
Sbjct: 244 tgataagatcttcttttaacaccccccatccccaacttctg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no542_f02.g1 MSMg01no542_f02.g1 CHROMAT_FILE:
MSMg01no542_f02.g1 PHD_FILE: MSMg01no542_f02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:19 2005
(596 letters)
>mm_chr6_127685858_127686853
Length = 996
Score = 1067 bits (552), Expect = 0.0
Identities = 580/596 (97%), Gaps = 11/596 (1%)
Strand = Plus / Plus
Query: 1 ttacagacaactgcggaacgcctgctgctatgaggcactgtatagaagaaatggacctgg 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 ttacagacaactgcggaacgcctgctgctatgaggcactgcatagaagaaatggacctgg 260
Query: 61 gaggaggcattgcccagagattttgctttctaaatgctgagacctttagcaccctcccca 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 gaggaggcattgcccagagattttgctttctaaacgctgagacctttagcaccctcccca 320
Query: 121 gaggcttcaataaaacacacttgacaaaaaaaaaaaaaaaagaaagaaagaaagctcaaa 180
||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 gaggcttcaataaaacacacttgacaaaaaaaaaa-----------aaagaaagctcaaa 369
Query: 181 cacaaaagaggtgaattcccttcgagtgggagacaagaaattctagcagagttggctatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 cacaaaagaggtgaattcccttcgagtgggagacaagaaattctagcagagttggctatg 429
Query: 241 ccacaagcagggagctttgtcaatggattttgaaagggataggtgagctgggtgaattcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ccacaagcagggagctttgtcaatggattttgaaagggataggtgagctgggtgaattcc 489
Query: 301 gagaggaagaggggtgattggagcaaaaaggacagggggtgggaaggtagtgaacttgat 360
|||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 490 gagaggaagaggggtggttggagcaaaaaggacagggggtgggaaggtggtgaacttgat 549
Query: 361 gggggagaggaggttgagatggcagaagagtctactgagaaaagaccatcctcaggctaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gggggagaggaggttgagatggcagaagagtctactgagaaaagaccatcctcaggctaa 609
Query: 421 gagggtggaattaaatacggtagacaatggagagccgcaccccatgtatgcagggtccca 480
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 610 gagggtggaattaaatacggtagacaatggagagccgcaccccacgtatgcagggtccca 669
Query: 481 catccccatatttggacaccgcttttggaaattgagtgtgattgtagagtacagtgggga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 catccccatatttggacaccgcttttggaaattgagtgtgattgtagagtacagtgggga 729
Query: 541 acaagaaagcaaagggcatctatggtgaaatgtaggaggctattttcaaagtccgg 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 acaagaaagcaaagggcatctatggtgaaatgtaggaggctattttcaaagtccgg 785
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
