NCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCAAGGCCCATACCTAAACATGATAAAAGCAATCTACAGAAATCC
AGTAGCCAACATCAAAGTAAATGGTGAGACTCTGGAAGCAATCCCATTAA
AATCAGGGACTAGACAAGGCTGCCCACTTTCTACCTACCTATTCAACATT
GTAATTGAAGTCCTAGCCAGAGCAATTTGACAAAAAAAGGAGATCAAGGG
GATACAAATTGGAAAGGAAAAAGTAAAATAATCACTTTTTGCAGATGATG
TGATAGTATATATAAGTGACCCTAAAAATTCCACCAGAGAACTCCTAAAC
CTGATAACAGCTTCAATGAAGTGGCGGGATATAAATTTAACACAAACAAG
TCAATGCCCTTTCTCTACACAAAGAATAAACAGGCTGAGAAAGAAATTAG
GGATACAACACCCTTCTCAATAGTCACAAATAATATAAAATACCTTGGTG
TGACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAAAACTTCAAGTTC
CTGAAGAAAGAAATTGAAAAAGATCTCAGAAAATGGAAAGATCTCCCATG
CTCATGGATTGGCAGGATCAATATAGTAAAAATGGCTATCTTGCCAAAAG
CAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACTCAATTCTTC
AACGAATTAGAAAGGGCAATCGGCAGATTCATCTGCAATAACAAAAAACC
TAGGATAGC

NCAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTTTAAACTTGGTACCTACGTTTGT
GAGTATTTTGGAGTGAGAAACGAACATGTAATAATATGAGAATTTCGATT
ATGAAGGTTCTTCAAATCTGGTTCTCTATTTTATGTTTTTCTACCATCGT
AATTGAACAAATTATATTATAGATATCTTAATGTTTTAAAAATAATATGC
CATCCTTTTTCTATAAGCACACTTGGTTTTGAGTATTACTTTCAAAGGCA
AAGTCATATACAAAAGAAAAAAAGGCAAAAATCTATGAGTTTTCTGTGAC
ACTCAACAGATAAAAGTAACTAGAGGTTTAATCTTTACAACTCAAAGAAA
CCAACAATCATTTCTCCTGGTATTATATGTCTTGCTCATTATCATTTTCA
TTCTCATTTTTTTAAAGGAGCTGATTCACTCTCTTATGCTCCCTACGGAT
CATGCCATTAAAAATGAGCCTGGAGACAGTGTTAGCATTCAGATTTTTGA
ATAATGTCTGAAGGATAGAAGAATGTATGCGAAAGTCATTTAAAATTCAC
CACCACCTTTAATTAGACTTATTTAACCTTGCAGTCTTAACAAATGAATA
TGGCTAGATCAAGTGAGTTTTTGTTAGTGTTTCTACCATGATCCCGGATA
TTAATTGAAGGGCTCTACACAGACTGAGAATTGATGAAGCATGTGATGTG
AGAGTGCTTGTAACTCTAN

Query= MSMg01no543_g21.g1 MSMg01no543_g21.g1 CHROMAT_FILE:
MSMg01no543_g21.g1 PHD_FILE: MSMg01no543_g21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:48 2005
         (676 letters)



>mm_chr6_19807279_19808354
          Length = 1076

 Score = 1261 bits (652), Expect = 0.0
 Identities = 670/676 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttttaaacttggtacctacgtttgtgagtattttggagtgagaaacgaacatgtaataa 60
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 tttttaaacttggtacctacgtttgttagtattttggagtgagaaacgaacatgtaataa 260

                                                                       
Query: 61  tatgagaatttcgattatgaaggttcttcaaatctggttctctattttatgtttttctac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatgagaatttcgattatgaaggttcttcaaatctggttctctattttatgtttttctac 320

                                                                       
Query: 121 catcgtaattgaacaaattatattatagatatcttaatgttttaaaaataatatgccatc 180
           |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 catcgtaattcaacaaattatattatagatatcataatgttttaaaaataatatgccatc 380

                                                                       
Query: 181 ctttttctataagcacacttggttttgagtattactttcaaaggcaaagtcatatacaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctttttctataagcacacttggttttgagtattactttcaaaggcaaagtcatatacaaa 440

                                                                       
Query: 241 agaaaaaaaggcaaaaatctatgagttttctgtgacactcaacagataaaagtaactaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaaaaaaaggcaaaaatctatgagttttctgtgacactcaacagataaaagtaactaga 500

                                                                       
Query: 301 ggtttaatctttacaactcaaagaaaccaacaatcatttctcctggtattatatgtcttg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggtttaatctttacaactcaaagaaaccaacaatcatttctcctggtattatatgtcttg 560

                                                                       
Query: 361 ctcattatcattttcattctcatttttttaaaggagctgattcactctcttatgctccct 420
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcattatcattttctttctcatttttttaaaggagctgattcactctcttatgctccct 620

                                                                       
Query: 421 acggatcatgccattaaaaatgagcctggagacagtgttagcattcagatttttgaataa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acggatcatgccattaaaaatgagcctggagacagtgttagcattcagatttttgaataa 680

                                                                       
Query: 481 tgtctgaaggatagaagaatgtatgcgaaagtcatttaaaattcaccaccacctttaatt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgtctgaaggatagaagaatgtatgcgaaagtcatttaaaattcaccaccacctttaatt 740

                                                                       
Query: 541 agacttatttaaccttgcagtcttaacaaatgaatatggctagatcaagtgagtttttgt 600
           || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 741 agtcttatttaaccttgcagtctcaacaaatgaatatggctagatcaagtgagtttttgt 800

                                                                       
Query: 601 tagtgtttctaccatgatcccggatattaattgaagggctctacacagactgagaattga 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tagtgtttctaccatgatcccggatattaattgaagggctctacacagactgagaattga 860

                           
Query: 661 tgaagcatgtgatgtg 676
           ||||||||||||||||
Sbjct: 861 tgaagcatgtgatgtg 876


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space:   709956
Effective search space used:   709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)