Query= MSMg01no543_o15.b1 MSMg01no543_o15.b1 CHROMAT_FILE:
MSMg01no543_o15.b1 PHD_FILE: MSMg01no543_o15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:25 2005
(634 letters)
>mm_chr6_101930952_101931985
Length = 1034
Score = 1191 bits (616), Expect = 0.0
Identities = 628/632 (99%), Gaps = 1/632 (0%)
Strand = Plus / Minus
Query: 4 ggaattcaactaatgtgctttaaattgggtctgggagctcacttggttgtttccatcttg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ggaattcaactaatgtgctttaaattgggtctgggagctcacttggttgtttccatcttg 624
Query: 64 gaatcggagaccccagcatgctgtacctctgaagaataaatcactttttggttttatata 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gaatcggagaccccagcatgctgtacctctgaagaataaatcactttttggttttatata 564
Query: 124 ctttttgagtctgggatatcattcctcagagaatcacatacccttacaatggaaagagct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ctttttgagtctgggatatcattcctcagagaatcacatacccttacaatggaaagagct 504
Query: 184 taaaaaaatagtacagtttattgtaactgctattgtaacttttacttgttttcatcgtta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 taaaaaaatagtacagtttattgtaactgctattgtaacttttacttgttttcatcgtta 444
Query: 244 ttataatgtgttacctgactacaaacctggaccctgcttcccaggattgtatgaatgaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttataatgtgttacctgactacaaacctggaccctgcttcccaggattgtatgaatgaaa 384
Query: 304 atctaaatactgatttttttt-attttattatttatcaggttaattaaattgacaaaaat 362
|| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atttaaatactgatttttttttattttattatttatcaggttaattaaattgacaaaaat 324
Query: 363 ctctaattatataaaaagggaataaactcacctttctttgccctattatgaatatgaaat 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ctctaattatataaaaagggaataaactcacctttctttgccctattatgaatatgaaat 264
Query: 423 agcattgtgcatgcaaaatatatgacctaaataaacatccaaaaataatacacagaaagg 482
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 agcattgtgtatgcaaaatatatgacctaaataaacatccaaaaataatacacagaaagg 204
Query: 483 aaatataaaaacagaagaaattaaattctctaccagtttttctttcagaggaaaataatc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 aaatataaaaacagaagaaattaaattctctaccagtttttctttcagaggaaaataatc 144
Query: 543 aattttgttggttttgttgaagtatcttcaagttgaatctttcctagtcttcaagttgaa 602
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 aattttgttggtttcgttgaagtatcttcaagttgaatctttcctagtcttcaagttgaa 84
Query: 603 tctttcagcagtgtttattagctgaaatcctt 634
||||||||||||||||||||||||||||||||
Sbjct: 83 tctttcagcagtgtttattagctgaaatcctt 52
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no543_o15.g1 MSMg01no543_o15.g1 CHROMAT_FILE:
MSMg01no543_o15.g1 PHD_FILE: MSMg01no543_o15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:25 2005
(336 letters)
>mm_chr6_101741700_101742435
Length = 736
Score = 650 bits (336), Expect = 0.0
Identities = 336/336 (100%)
Strand = Plus / Plus
Query: 1 tctgcctcaagacccatttacttctctcagactggatccaacattcccattctttcattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgcctcaagacccatttacttctctcagactggatccaacattcccattctttcattt 260
Query: 61 cattttaaagctgaggatacctgttatagatccccacaatctattttccagcacaggctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cattttaaagctgaggatacctgttatagatccccacaatctattttccagcacaggctg 320
Query: 121 atgactacagtagatgtaatttcttcctaagggaaagtggatttgttgtcaagtattggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgactacagtagatgtaatttcttcctaagggaaagtggatttgttgtcaagtattggt 380
Query: 181 gaaaatttccaaaacaatacaaaggggcacacccatgccaggattttgtgggaatgtttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaaatttccaaaacaatacaaaggggcacacccatgccaggattttgtgggaatgtttc 440
Query: 241 aaaatttaccaaatatgagaaattgtatcttcctactcttagccaacatgaagggggact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaatttaccaaatatgagaaattgtatcttcctactcttagccaacatgaagggggact 500
Query: 301 aagctctcattcctccttaaaacttatatattattg 336
||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagctctcattcctccttaaaacttatatattattg 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
