Query= MSMg01no544_h08.b1 MSMg01no544_h08.b1 CHROMAT_FILE:
MSMg01no544_h08.b1 PHD_FILE: MSMg01no544_h08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:07 2005
(508 letters)
>mm_chr6_94363199_94364109
Length = 911
Score = 895 bits (463), Expect = 0.0
Identities = 496/509 (97%), Gaps = 5/509 (0%)
Strand = Plus / Plus
Query: 4 ggaattccaggcactttcagtgggcggggagatattttgggctgcactgctggggccctt 63
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 204 ggaattccaggcaccagcagtgggcggggaggtattttgggctgcactgctggggccctt 263
Query: 64 cagcatcttgcttctcgctgtggtgggtcttgggaagccgaatgcgaaccccagctggtt 123
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 264 cagcatcttgcttctcgctgtggtgggtcttgggaagccaaatgcgaaccccagctggtt 323
Query: 124 tctgctcttgtctcctctgacgaaagctggtctgaaaacaaggttactgtttccaaggca 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tctgctcttgtctcctctgacgaaagctggtctgaaaacaaggttactgtttccaaggcg 383
Query: 184 ctgaaggagctttgggggttttattgacattcatttttatagctctgaggaggttatttc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctgaaggagctttgggggttttattgacattcatttttatagctctgaggaggttatttc 443
Query: 244 tatcctttctgtcagtaatgtgagataagttgggaagaaaatgagattcccctgggagta 303
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 444 tatcctttctgtcagtaatgtgagataagttggaaagaaaatgagattcccctgggagta 503
Query: 304 tgcagtttagccaagtcccgtaatgtcattgtgaactctgaagagatttctggagccggt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgcagtttagccaagtcccgtaatgtcattgtgaactctgaagagatttctggagccggt 563
Query: 364 ctgaggggcaccctcggaagctctgtgttgggtct----gtcttcactgcaggctcagga 419
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 564 ctgaggggcaccctcggaagctctgtgttgggtctatctgtcttcactgcaggctcagga 623
Query: 420 tgtgaaactggtttctatggcctcacccacttcagccatccttcagtccctcaaaccctg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgtgaaactggtttctatggcctcacccacttcagccatccttcagtccctcaaaccctg 683
Query: 480 gagacctcaggcccggaggtggggggtgg 508
|||||||||||||| ||| ||||||||||
Sbjct: 684 gagacctcaggcccagag-tggggggtgg 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 911
Length adjustment: 10
Effective length of query: 498
Effective length of database: 901
Effective search space: 448698
Effective search space used: 448698
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no544_h08.g1 MSMg01no544_h08.g1 CHROMAT_FILE:
MSMg01no544_h08.g1 PHD_FILE: MSMg01no544_h08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:07 2005
(251 letters)
>mm_chr6_94558953_94559603
Length = 651
Score = 375 bits (194), Expect = e-108
Identities = 203/206 (98%)
Strand = Plus / Minus
Query: 44 tgtgcgtgcgtgtgtgtgcactcacacaggtgggctatgatcttaggagtagtgacaaag 103
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tgtgtgtgtgtgtgtgtgcactcacacaggtgggctatgatcttaggagtagtgacaaag 408
Query: 104 gtctataacaggacagtttgggatagggtagggctttagttctttgctctgttgagctgt 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gtctataacaggacagtttgggatagggtagggctttagttctttgctctgttgagctgt 348
Query: 164 tcctagaatggcagtgatttaattacattaggctttctggaaagcttggtgctccaataa 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tcctagaatggcagtgatttaattacattaggctttctggaaagcttggtgctccaataa 288
Query: 224 aagatctcagatatcatttcactaca 249
||||||||||||| ||||||||||||
Sbjct: 287 aagatctcagatagcatttcactaca 262
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
