NCGACCGCTAATCGACTCACTATTTTCAGAGGATCCGCGGAATTCACTAT
TAGAAATAGCAGTCTAAAATGAAAACACATTCTCTGGCCTTTCATTGTAG
CATTTGTAAACAAAATATGTTTTAGAAAGCCATCTCATGGCAATTTAGAT
TAAATAACGTTATTCAAAGGGTGATTATTTTCTACGCCATTGAGCTTATT
CCCTAAGTGGCTTTACAAGAAAGCATACTTTGCATACAGAATTTAGGATG
AAAACTTCTGCAGAAATATTTGAACTATATTCGAGGTCCAAATACAGATT
TTGCCCTCATGGTCAACTGTTTGATTGAAGCTTACTAAAAGGGAGAAAGA
AAGAAATGAAAGAGGAAAAGAGGGAGGGAGATGGGAGAGAGGGACAGAGG
CAGGGAATGGAGAAAAGAAAATAGGAAGGAAGAAAGGTGTTCAGATAAAA
ACTCAGGTATGAAACTTTCTTCAACATATTGGATCTTGTGGCTTAACTAG
AACTCAAAATAGAGGAGACTTTGCTCCATGGAGTTCACAATTCATTGCTT
AAAGTAGGAACTGCAGGTAACTAGTGACTTTCATAGATAAGACTTCCCCG
AAATTTCTGGGATGTTTAGGATATGAATCCCATGTCTCCCAGTGTCTTCT
CTTCATGTTCATATATTTCTTAGGGAAGAATTCAGATAACAACATGAACC
CATTGTAACTGCAGGAAAGACCAAGAGTTAGCACAGAAGNCCAATGCATA

GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAAAGAAGCACCTGAA
AAAATGCTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCC
TGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGT
GACAGCAGATGCTGCCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTG
TTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAGATCAGTCTGGCGGT
TCCTCAGAAAACTGGATATAGTACTACCGGAGGATCCAGCAATACCTCTC
CTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTC
CACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAGGAAC
CCAGATGCCCCTCAACAGAGGAATGGATACAGAAGATGTGGTACATCTAC
ACAATGGAGTACTACTCAGCTATTGAAAAGAATGAATTTATGAAATTCCT
GGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATT
CACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCC
AAAACCTAAGATACCCACGATATAAGATACAATTTCCTAAACACATGAAA
CTTCAGAAAAATGAAGACTGAAGTGTGAACACTAT

Query= MSMg01no545_p24.b1 MSMg01no545_p24.b1 CHROMAT_FILE:
MSMg01no545_p24.b1 PHD_FILE: MSMg01no545_p24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:08 2005
         (708 letters)



>mm_chr6_78425363_78426470
          Length = 1108

 Score = 1284 bits (664), Expect = 0.0
 Identities = 679/684 (99%)
 Strand = Plus / Plus

                                                                       
Query: 25  gaattcactattagaaatagcagtctaaaatgaaaacacattctctggcctttcattgta 84
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 225 gaattcactattagaaatagcagtctaaaatgaaaacacattctctggcctttctttgta 284

                                                                       
Query: 85  gcatttgtaaacaaaatatgttttagaaagccatctcatggcaatttagattaaataacg 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 gcatttgtaaacaaaatatgttttagaaagccatctcatggcaatttagattaaataacg 344

                                                                       
Query: 145 ttattcaaagggtgattattttctacgccattgagcttattccctaagtggctttacaag 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ttattcaaagggtgattattttctacgccattgagcttattccctaagtggctttacaag 404

                                                                       
Query: 205 aaagcatactttgcatacagaatttaggatgaaaacttctgcagaaatatttgaactata 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 aaagcatactttgcatacagaatttaggatgaaaacttctgcagaaatatttgaactata 464

                                                                       
Query: 265 ttcgaggtccaaatacagattttgccctcatggtcaactgtttgattgaagcttactaaa 324
           || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 465 ttagaggtccaaatacagattttgccctcatggtcaactttttgattgaagcttactaaa 524

                                                                       
Query: 325 agggagaaagaaagaaatgaaagaggaaaagagggagggagatgggagagagggacagag 384
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 525 agggagaaagaaagaaatgaaagaggaaaaaagggagggagatgggagagagggacagag 584

                                                                       
Query: 385 gcagggaatggagaaaagaaaataggaaggaagaaaggtgttcagataaaaactcaggta 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 585 gcagggaatggagaaaagaaaataggaaggaagaaaggtgttcagataaaagctcaggta 644

                                                                       
Query: 445 tgaaactttcttcaacatattggatcttgtggcttaactagaactcaaaatagaggagac 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 tgaaactttcttcaacatattggatcttgtggcttaactagaactcaaaatagaggagac 704

                                                                       
Query: 505 tttgctccatggagttcacaattcattgcttaaagtaggaactgcaggtaactagtgact 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 tttgctccatggagttcacaattcattgcttaaagtaggaactgcaggtaactagtgact 764

                                                                       
Query: 565 ttcatagataagacttccccgaaatttctgggatgtttaggatatgaatcccatgtctcc 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 ttcatagataagacttccccgaaatttctgggatgtttaggatatgaatcccatgtctcc 824

                                                                       
Query: 625 cagtgtcttctcttcatgttcatatatttcttagggaagaattcagataacaacatgaac 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 cagtgtcttctcttcatgttcatatatttcttagggaagaattcagataacaacatgaac 884

                                   
Query: 685 ccattgtaactgcaggaaagacca 708
           ||||||||||||||||||||||||
Sbjct: 885 ccattgtaactgcaggaaagacca 908


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 708
Length of database: 1108
Length adjustment: 10
Effective length of query: 698
Effective length of database: 1098
Effective search space:   766404
Effective search space used:   766404
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)