XXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGGATCCGCGGAATTCCT
CTATACTTACTTAAAAAGTAAAAAAAAATGTTCATTTTCTAAATTATATA
TGGAATTTGACAAGCAGCTTCGAGCATATGAGAGGGATCAGGGCTTGCTG
ATCAAGCTGCATCCTCCTCAACCACGGCAGCAGAGGTGCTCACTCTAGAT
GCTAACGGGCGTGTTCAGGAGAAGCTGAGGAAACCTCGAGGTTGCTAAAA
GCAAACACTATGATTCTTCTTCCTATCCTAATGAGTCAGCAATTTGTCAT
TCATCTGCATCAGTTTGCTAGCAGGACAATGTACTACAAGTTCAAAGGTT
AGTTGTCGGGTATGTCGGGCGTCTGAGGAGATGGAAATGTGCGGAGCTGA
GCCTGTGACCCAAACCTGAGGCAGTGCCCGCTGGAGAACAGGCAAGGGCG
TGTCCTCAGAAGATGGCGTGGACAGCTGGTGTGAGTGTGCCATCCATCCA
GGGTTGGGAAGGGTTGAGTAAACAGTGGGACAGTGACAGAGTACAGGGAT
TAATGGCTGAAAGCATTCAGTGATTCTTAAAACAGACATTTAAGTAAATG
GAGGCATTCTGAAGCTTTAGTTCTGAGGAACGATATAAGAAAACTTTCCT
TTCCTTTGGAAACAAACTTCCTGCAGAAAGAGGACAAGATAAATGGAGCT
TGCAGCCTCAAGTGCACTTTATATTGAAGAGACATGAA

ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXACACTGAACGTCAAGGGTAGAGGCAGGCATA
TTGACCTGAGTTTGAGGATGGGCTGGTCTATCAGGTAAGTTTCAGGACAG
TCAGGGGTTTGTAGAGGCCATGCCTCAACAACAAGGAGACGTGATCAAAG
TAGATCCTCTCATTAGTTTCTGATTGGGGTGCTGGTCTGGAACTCAGGGT
CCTGTGCATACCAGTCATGCACCTCGTACTGTCTGGGTTTATGTCAACGT
GATATAGGCTGTAGTCATTAGGAAAGAGGGAACCTCAATAGAGAAAATGC
CCCCTTAAGGTCTGACTGTAGGCAAGCTTGTAGGGCATTTTAAAATTATT
GATTGGAGGGAAGGCCTAGCTCATTGTGGGTTGGGCCATCCCTGGGCTGG
TGGTCCTGGGTTCTAAAAGAAAGCAGGCTGCCCAATCCATGAGGAGCAAG
CTACTAAGCAGCACCCCTCCATGGCCTCTGCATCAGCTCCTGCTCCAGAC
TTCTGCCCTGTTTGGGTTGCTGTCTTGACTTCCTTTTAAGATGAACTGAG
ATGTGGAAGTGTAAGTCACATAACCCTTGTCCTCCCCAAGGTGCTTTGGT
CACGGTGTTTCATCACAGCAATAGCAATCTGAACTAAGACAGCCTAGGCT
GAGAGTAGACTCTCAGAGCCCCCTCCCTACTN

Query= MSMg01no546_k14.b1 MSMg01no546_k14.b1 CHROMAT_FILE:
MSMg01no546_k14.b1 PHD_FILE: MSMg01no546_k14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:01 2005
         (704 letters)



>mm_chr6_119593597_119594699
          Length = 1103

 Score = 1307 bits (676), Expect = 0.0
 Identities = 691/696 (99%), Gaps = 1/696 (0%)
 Strand = Plus / Minus

                                                                       
Query: 9   gaattcctctatacttacttaaaaagtaaaaaaaaatgttcattttctaaattatatatg 68
           ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 903 gaattcctctatacttatttaaaaagt-aaaaaaaatgttcattttctaaattatatatg 845

                                                                       
Query: 69  gaatttgacaagcagcttcgagcatatgagagggatcagggcttgctgatcaagctgcat 128
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 gaatttgacaagcagcttcgagcatatgagagggatcagggcttgctgatcaagctgcat 785

                                                                       
Query: 129 cctcctcaaccacggcagcagaggtgctcactctagatgctaacgggcgtgttcaggaga 188
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 cctcctcaaccacggcagcagaggtgctcactctagatgctaacgggcgtgttcaggaga 725

                                                                       
Query: 189 agctgaggaaacctcgaggttgctaaaagcaaacactatgattcttcttcctatcctaat 248
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 agctgaggaaacctcgaggttgctaaaagcaaacactatgattcttcttcctatcctaat 665

                                                                       
Query: 249 gagtcagcaatttgtcattcatctgcatcagtttgctagcaggacaatgtactacaagtt 308
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gagtcagcaatttgtcattcatctgcatcagtttgctagcaggacaatgtactacaagtt 605

                                                                       
Query: 309 caaaggttagttgtcgggtatgtcgggcgtctgaggagatggaaatgtgcggagctgagc 368
           ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 604 caaaggttagttgtcgggtatgtcgggcgtctgaggagatggaaacgtgcggagctgaac 545

                                                                       
Query: 369 ctgtgacccaaacctgaggcagtgcccgctggagaacaggcaagggcgtgtcctcagaag 428
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ctgtgacccaaacctgaggcagtgcccgctggagaacaggcaagggcgtgtcctcagaag 485

                                                                       
Query: 429 atggcgtggacagctggtgtgagtgtgccatccatccagggttgggaagggttgagtaaa 488
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 atggcgtggacagctggtgtgagtgtgccatccatccagggttgggaagggttgagtaaa 425

                                                                       
Query: 489 cagtgggacagtgacagagtacagggattaatggctgaaagcattcagtgattcttaaaa 548
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 cagtgggacagtgacagagtacagggattaatggctgaaagcattcagtgattcttaaaa 365

                                                                       
Query: 549 cagacatttaagtaaatggaggcattctgaagctttagttctgaggaacgatataagaaa 608
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 cagacattgaagtaaatggaggcattctgaagctttagttctgaggaacgatataagaaa 305

                                                                       
Query: 609 actttcctttcctttggaaacaaacttcctgcagaaagaggacaagataaatggagcttg 668
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 actttcctttcctttggaaacaaacttcctgcagaaagaggacaagataaatggagcttg 245

                                               
Query: 669 cagcctcaagtgcactttatattgaagagacatgaa 704
           ||||||||||||||||||||||||||||||||||||
Sbjct: 244 cagcctcaagtgcactttatattgaagagacatgaa 209


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 704
Length of database: 1103
Length adjustment: 10
Effective length of query: 694
Effective length of database: 1093
Effective search space:   758542
Effective search space used:   758542
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)