Query= MSMg01no547_c23.b1 MSMg01no547_c23.b1 CHROMAT_FILE:
MSMg01no547_c23.b1 PHD_FILE: MSMg01no547_c23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:45 2005
(549 letters)
>mm_chr6_32949532_32950480
Length = 949
Score = 1019 bits (527), Expect = 0.0
Identities = 539/543 (99%), Gaps = 1/543 (0%)
Strand = Plus / Plus
Query: 7 gaattcatgttggatcctgattttaaattgttagttgaaatatttacatggccaactttc 66
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcatgttggaacctgattttaaattgttagttgaaatatttacatggccaactttc 266
Query: 67 atttttctacttgatacttgacactaaaatcacactaaaaccattttaatgaggcaaatt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atttttctacttgatacttgacactaaaatcacactaaaaccattttaatgaggcaaatt 326
Query: 127 gaaaacctctccaaatgaaatagctgaagcctggaggctctagatagttcctgtagaagg 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gaaaacctctccaaatgaaatagctgaagcctggaggctctagatagttcctgtagaagg 386
Query: 187 aagcaactgtaaatagtgaataactaataaattgctctcgtggaagctacacatacttcg 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aagcaactgtaaatagtgaataactaataaattgctctcgtggaagctacacatacttcg 446
Query: 247 atggagggattcaatattctcatttcaaaggcaaactggcccagcagctaactttctaag 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 atggagggattcaatattctcatttcaaaggcaaactggcccagcagctaactttctaag 506
Query: 307 tgattaacaaactaagttcgtgaactggctgtgacagccttgacatgaagagcaagcaca 366
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tgattaacaaactaagtttgtgaactggctgtgacagccttgacatgaagagcaagcaca 566
Query: 367 cagtagaggcgagcaccataagtctgagtccacacagcaagcatcaaccaacacaaagca 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 cagtagaggcgagcaccataagtctgagtccacacagcaagcatcaaccaacacaaagca 626
Query: 427 gcaagccattgggccttttccttaattcctggggcttttttttttttttttttttttttt 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gcaagccattgggccttttccttaattcctggggcttttttttttttttttttttttttt 686
Query: 487 ttgcgggagggggtgttctccccaaagtctaagaatgaatatagaggagaaataaatgca 546
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 t-gtgggagggggtgttctccccaaagtctaagaatgaatatagaggagaaataaatgca 745
Query: 547 aga 549
|||
Sbjct: 746 aga 748
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 65
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no547_c23.g1 MSMg01no547_c23.g1 CHROMAT_FILE:
MSMg01no547_c23.g1 PHD_FILE: MSMg01no547_c23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:45 2005
(635 letters)
>mm_chr6_33072679_33073707
Length = 1029
Score = 862 bits (446), Expect = 0.0
Identities = 469/480 (97%), Gaps = 7/480 (1%)
Strand = Plus / Minus
Query: 157 gtaaccccaagtcttggactgaatgaaaaaggaggaaggaaaaagttagatcta-ttttt 215
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1029 gtaaccccaagtcttggactgaatgaaaaaggaggaaggaaaaagttagatctatttttt 970
Query: 216 ttttcttagtaggatcatggatcaagctgaaagctgctcccactgccatatcttctctat 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 ttttcttagtaggatcatggatcaagctgaaagctgctcccactgccatatcttctctat 910
Query: 276 cataggggactgtattcctctggacttacaacccttacttcctctggttgttttttgtca 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 cataggggactgtattcctctggacttacaacccttacttcctctggttgttttttgtca 850
Query: 336 gctatttggccacagtgatggtgtgtcaggcaccaatacagaaggtggggtgatatcatc 395
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 849 gctatttggccacagtgatggtgtgtcaggcatcaatacagaaggtggggtgatatcatc 790
Query: 396 cacccagcacaccctttggagtataccctgatggtgtgtgatcagcagcttagccatgaa 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 cacccagcacaccctttggagtataccctgatggtgtgtgatcagcagcttagccatgaa 730
Query: 456 agtcaatttcactttctctgcctcccaataccacacttgccagcctaaaatctggagttt 515
|||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 729 agtcaa------tttctctgcctcccaataccacactcaccagcctaaaatctggagttt 676
Query: 516 gaggaccatggcaggttatactcctgaggaagtcagacgttttactggggttctcttaga 575
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 675 gaggaccatggcaggttatactcctgaggaagtcagacgttttactagggttctcttaga 616
Query: 576 atagacataagagaaatgtaaggagtttctgaaggtagaatttggcagcattggtctgtg 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 atagacataagagaaatgtaaggagtttctgaaggtagaatttggcagcattggtctgtg 556
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1029
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1019
Effective search space: 636875
Effective search space used: 636875
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
