Query= MSMg01no547_n15.b1 MSMg01no547_n15.b1 CHROMAT_FILE:
MSMg01no547_n15.b1 PHD_FILE: MSMg01no547_n15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:35 2005
(645 letters)
>mm_chr6_40355368_40356416
Length = 1049
Score = 1151 bits (595), Expect = 0.0
Identities = 631/645 (97%), Gaps = 4/645 (0%)
Strand = Plus / Minus
Query: 5 gaattcttgaaatccttcctaaagtaaactatgagttatagcatccacccaccctcccca 64
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 849 gaattcttgaaatccttcctaaagtaagctatgagttatagcatccacccaccctcccca 790
Query: 65 ctgcctcccagtcctcttggtcagtgctgaagggtggtgctggccctgagtttatagact 124
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 789 ctgcctcccagtcctcttggtcagtgctgaagggtggtgctggccctgagcttatagact 730
Query: 125 cataagtgttgaatatcctcttgaactaactaacaggttcaaataggtaagggaagaagt 184
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 cataagcattgaatatcctcttgaactaactaacaggttcaaataggtaagggaagaagt 670
Query: 185 ttccagtttctctaagagctctgtggagggatggtaca----cagtcctacagcagatac 240
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 669 ttccagtttctctaagagctctgtggagggatggtacacagtcagtcctacagcagatac 610
Query: 241 ttctgatgaattctgaaatatagccagggcccaagctggttaacttaggttgcaatgtga 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 609 ttctgatgaattctgaaatatagccagggcccaagctggttaactcaggttgcaatgtga 550
Query: 301 tgttaacaggtctctttaccaatgtgaaactcccacagacatctctgaagtagagacaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tgttaacaggtctctttaccaatgtgaaactcccacagacatctctgaagtagagacaac 490
Query: 361 attccttaggctaagcaaggaacctaacagatttgtcagggaaaacataacagtgcctcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 attccttaggctaagcaaggaacctaacagatttgtcagggaaaacataacagtgcctcc 430
Query: 421 caaccaagagaatggctggaaatcccagacgaacaaccatgcctgcttctttttgtctgt 480
|| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 429 catccaagagaatggctggaaatcccagactaacaaccatgcctgcttcttttggtctgt 370
Query: 481 gatgggactgcggtcactttgttctttggggctgggatactttggattcatgcactatgt 540
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 369 gatgggactgcggtcactttgttctttggggctgggatactttggactcatgcactatgt 310
Query: 541 tggaggacagctgtgaaccatattcagaaagccatgtgaatagctagctagccagccatc 600
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tggagggcagctgtgaaccatattcagaaagccatgtgaatagctagctagccagccatc 250
Query: 601 agacatccatgtctgtagctaaagagcagccaggttgatgcccac 645
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 agacatccatgtctgtagctaaagagcagccaggttgatgcccac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1049
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1039
Effective search space: 659765
Effective search space used: 659765
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no547_n15.g1 MSMg01no547_n15.g1 CHROMAT_FILE:
MSMg01no547_n15.g1 PHD_FILE: MSMg01no547_n15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:35 2005
(648 letters)
>mm_chr6_40214367_40215416
Length = 1050
Score = 1237 bits (640), Expect = 0.0
Identities = 647/650 (99%), Gaps = 2/650 (0%)
Strand = Plus / Plus
Query: 1 tcacaaggtacagctttagaagggaaaatgatgtctatgcaaagtagttctcattaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcacaaggtacagctttagaagggaaaatgatgtctatgcaaagtagttctcattaattc 260
Query: 61 tgaactgattggtcataaaaccaaatggccttcagaaagtactctatctatctgagctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaactgattggtcataaaaccaaatggccttcagaaagtactctatctatctgagctta 320
Query: 121 agaatttggattctagtccccagaggccttaggcatacctcttaatataacttccaaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaatttggattctagtccccagaggccttaggcatacctcttaatataacttccaaatg 380
Query: 181 ctgaaggattgagcttcatccacactaaaattaggactaagcaaaaataaaatctatcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgaaggattgagcttcatccacactaaaattaggactaagcaaaaataaaatctatcct 440
Query: 241 tagctattttgaaggccaagtgtagattcatcttattgaatattgcatgtcctagaatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagctattttgaaggccaagtgtagattcatcttattgaatattgcatgtcctagaatat 500
Query: 301 gcattttcttccagaataacccagttcttatactaaagg--tttttttttaattaaaata 358
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 501 gcattttcttccagaataacccagttcttatactaaaggcttttttttttaattaaaata 560
Query: 359 tgaaatggcttttaagccatttcagagggaaagaaagcaagcttttgcaaacaagggagt 418
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tggaatggcttttaagccatttcagagggaaagaaagcaagcttttgcaaacaagggagt 620
Query: 419 caaggttgttaggataagctcctacctcaaacaagaattagaacataaatacacacatag 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caaggttgttaggataagctcctacctcaaacaagaattagaacataaatacacacatag 680
Query: 479 ggaagatgccacctgaatgtgaaggttgaggtcagggtggtaattgtacaagctgaggag 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggaagatgccacctgaatgtgaaggttgaggtcagggtggtaattgtacaagctgaggag 740
Query: 539 cttcaaggacagctaacaaactccaaaagctggagaggaacctgtgctggattctgtctg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cttcaaggacagctaacaaactccaaaagctggagaggaacctgtgctggattctgtctg 800
Query: 599 gcagcctcagaaggaaccactctgtcagtatcttgaacccaaacctccag 648
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gcagcctcagaaggaaccactctgtcagtatcttgaacccaaacctccag 850
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1050
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1040
Effective search space: 663520
Effective search space used: 663520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
