XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAAACCTA
TTGATTTTGTAGCTATTGGCTTGATGAGTTACTACCTGCTTTCCCTCAGT
CTATCAAATATAAATACTAGCCCCTTTAAGAGAATTACTCTTAATGTACA
TTAGACCGATAGACCCTTCAGATCCATTGTATCTAGGCCATGTCAATAAT
CTACTTTTCATTTTCATTTTTAAAGTAATATTCCTCAGAATTTGGAATTT
GTTTCTAGAGGAAAAAATTGATTTTTCTTTTGTATTCTTCAAAGTTAACT
GAAAAAAAAAGTCATAAAAGCAGGCATTTTGGGTTTGATCTCAGGATTAT
CCAAGAAGGCCCACAGAATCACACTAACAAGTGTGCAAAAGCACTTGGTG
TAACAGGGGGATGCTGAGGATGCAGAGACAGCTTAGGATAACAAGTTCAT
TCTGTTATGTGCCCAGTCTCGCAGCTCAGCTGTTAGGATGGTTTTATTCT
CCCCTCTGTAAGGCAGGCTAGGAACTGAAGGTCTTGGGATGGCTGACTTC
CTATACCCAATTGCATACTAATCACACATCTTTGCTTGGTGTATATTTAG
CAGTGAAATCCAAGTGTACTAATTCACACCTCCACACTTGAAAGGCAAGG
GATTGCTCTGCGAGGAAGGAGATAGTGCTTTAGCTTGCAGGAAATGGTTG
CCTGCTCCTGAGTGGTTTGGTCTCATTACAAAGAAAGGTGAGAAATTCCA
T

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXTCCATTTAGCTTTGTAGCCCATTTTTATATTAGATTA
TTTAGTTTTGGGGGGGATCTAATTTCTTGAATTTTTAAAGTTTTGAATGA
ACTTCAAACGCACAGATCCTTTCCTAGACTGTGTCCTGAATCCTTGAATT
GTGTAATTTTTCTTTCTTTTTTAAAAAAAATACTTTTTAAATTTATATTT
CCTATGTATGTTTTAGGTTGTTTCTCTTTCCTACTAGGTACCATATCATA
CTAACCCGTTATGTCAGATATCTGTCTGCTAACTTCTACAACTCTGTCAT
ATCTAAGGATGTTTCCGCTGAGTCTTTATGTCTTCCTCATGCTACCTATG
ATTTTCTAAAATTTATTTTTCATAATGCTTAGCCTTCTAATTAAAGTCAA
ATACGTAGGGCAAAGAGAATTGTGGCAGCTCACTCTTAAGTGTGAGGCTT
CGTGGTAGTGGATATAGAAGTTGGAGTAGATTTCATGTTTCCTCTAGCAT
GAAGCCTAGGAGGCTTAATCTCTCTCTCTAATTCTTATTTTCACATCCCC
TCTGGAGTCTGGTTTTCCCTAAGTATATTTCCTAAGATACAGTGGTTTTT
TGTTTTTTTTTCTCCAATCAATTACTACTACACTGTGATTGAGGGGTTGT
TTGTTTGTTTGTTTGTTGCAAGCCTTTGGATAAGTCTCAGTTCTTTAGG

Query= MSMg01no547_p10.b1 MSMg01no547_p10.b1 CHROMAT_FILE:
MSMg01no547_p10.b1 PHD_FILE: MSMg01no547_p10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:44 2005
         (658 letters)



>mm_chr6_106957579_106958636
          Length = 1058

 Score = 1210 bits (626), Expect = 0.0
 Identities = 647/654 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaaacctattgattttgtagctattggcttgatgagttactacctgctttccctc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 gaattcaaacctattgattttgtagctattggcttgatgagttactacctgctttccctc 799

                                                                       
Query: 65  agtctatcaaatataaatactagcccctttaagagaattactcttaatgtacattagacc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 agtctatcaaatataaatactagcccctttaagagaattactcttaatgtacattagacc 739

                                                                       
Query: 125 gatagacccttcagatccattgtatctaggccatgtcaataatctacttttcattttcat 184
           |||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 738 gatagacctttcagatcgattgtatctaggccacgtcaataatctacttttcattttcat 679

                                                                       
Query: 185 ttttaaagtaatattcctcagaatttggaatttgtttctagaggaaaaaattgatttttc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ttttaaagtaatattcctcagaatttggaatttgtttctagaggaaaaaattgatttttc 619

                                                                       
Query: 245 ttttgtattcttcaaagttaactgaaaaaaaaagtcataaaagcaggcattttgggtttg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ttttgtattcttcaaagttaactgaaaaaaaaagtcataaaagcaggcattttgggtttg 559

                                                                       
Query: 305 atctcaggattatccaagaaggcccacagaatcacactaacaagtgtgcaaaagcacttg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 atctcaggattatccaagaaggcccacagaatcacactaacaagtgtgcaaaagcacttg 499

                                                                       
Query: 365 gtgtaacagggggatgctgaggatgcagagacagcttaggataacaagttcattctgtta 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gtgtaacagggggatgctgaggatgcagagacagcttaggataacaagttcattctgtta 439

                                                                       
Query: 425 tgtgcccagtctcgcagctcagctgttaggatggttttattctcccctctgtaaggcagg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 438 tgtgcccagtctcgcagctcagctgttaggatggttttattctcccctctgtagggcagg 379

                                                                       
Query: 485 ctaggaactgaaggtcttgggatggctgacttcctatacccaattgcatactaatcacac 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ctaggaactgaaggtcttgggatggctgacttcctatacccaattgcatactaatcacac 319

                                                                       
Query: 545 atctttgcttggtgtatatttagcagtgaaatccaagtgtactaattcacacctccacac 604
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 318 atctttgcttggtgtatatttagcagtgaaatccaagtgtcctaattcacacctccacac 259

                                                                 
Query: 605 ttgaaaggcaagggattgctctgcgaggaaggagatagtgctttagcttgcagg 658
           ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 258 ttgaaaggcaagggattgctctgtgaggaaggagatagtcctttagcttgcagg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space:   679104
Effective search space used:   679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)