Query= MSMg01no548_k17.b1 MSMg01no548_k17.b1 CHROMAT_FILE:
MSMg01no548_k17.b1 PHD_FILE: MSMg01no548_k17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:39 2005
(434 letters)
>mm_chr6_102197810_102198644
Length = 835
Score = 791 bits (409), Expect = 0.0
Identities = 424/429 (98%), Gaps = 1/429 (0%)
Strand = Plus / Plus
Query: 5 gaattcaatcaagaaccccatcaccaattattctgatcactaatcatttcagtaaaaaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatcaagaaccccatcaccaattattctgatcactaatcatttcagtaaaaaaa 264
Query: 65 aaa-tgctagggcattgctccaactgattataattattattgttataaaatggtttgcta 123
||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 265 aaaatgctagggcattgctccaactgattataattattgttgttaaaaaatggtttgcta 324
Query: 124 tttctaacatgtaaaggaaagacattagtcaagggcatgccaaactcatgtcggcattta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttctaacatgtaaaggaaagacattagtcaagggcatgccaaactcatgtcggcattta 384
Query: 184 aatgggatcaactgcaagtactatgagtcctaagaaggagctaaaagagaggcgcaagat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatgggatcaactgcaagtactatgagtcctaagaaggagctaaaagagaggcgcaagat 444
Query: 244 gactggaatctactactttggaaatttgtcaatcttaaaacagaataaaaatttctcttt 303
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 445 aactggaatctactactttggaaatttgtcaatcttaaaacagaataaaaatgtctcttt 504
Query: 304 tcaatttagtaaacactgagctaaagtttagagattaagtgataattagatttggctatt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcaatttagtaaacactgagctaaagtttagagattaagtgataattagatttggctatt 564
Query: 364 gtttcatcctacaaatttgcacatttctaatgccaatgtacagaatacccagacatcaaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtttcatcctacaaatttgcacatttctaatgccaatgtacagaatacccagacatcaaa 624
Query: 424 aaaaaaaaa 432
|||||||||
Sbjct: 625 aaaaaaaaa 633
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 835
Length adjustment: 9
Effective length of query: 425
Effective length of database: 826
Effective search space: 351050
Effective search space used: 351050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no548_k17.g1 MSMg01no548_k17.g1 CHROMAT_FILE:
MSMg01no548_k17.g1 PHD_FILE: MSMg01no548_k17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:39 2005
(611 letters)
>mm_chr6_102357797_102358813
Length = 1017
Score = 1147 bits (593), Expect = 0.0
Identities = 609/617 (98%), Gaps = 7/617 (1%)
Strand = Plus / Minus
Query: 1 tcatctcattttgcttgttggtattctcaatagagggcaca-tttttttttttcttaagg 59
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 817 tcatctcattttgcttgttggtattctcaatagagggcacattttttttttttcttaagg 758
Query: 60 aaatttagtgaaattctctgtaatacaatcctgaaatttgggga-----tttttttttta 114
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 757 aaatttagtgaaattctctgtaatacaatcctgaaatttggggattttttttttttttta 698
Query: 115 attcttgaacaagttttatctcatatccgagttacttcatggatttcaaaccatgtgagt 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 attcttgaacaagttttatctcatatccgagttacttcatggatttcaaaccatgtgagt 638
Query: 175 tttgattggaaaactttatgccttttccccttggttttctgtttatgactactgtgatat 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 tttgattggaaaactttatgccttttccccttggttttctgtttatgactactgtgatat 578
Query: 235 atgtcttcagcagctgagatgggataggtgctccttccaactattttgaatcttccaaat 294
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 577 atgtcttcagcagctgagatgggataggtgctccttccaactatttcgaatcttccaaat 518
Query: 295 ctatttccctctggcatttacatgtacttcttggtagattgccaactccttatttgaaca 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ctatttccctctggcatttacatgtacttcttggtagattgccaactccttatttgaaca 458
Query: 355 cttacattgagttttaatatctgttatgacattttgtccacagctcagatatttatttct 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 cttacattgagttttaatatctgttatgacattttgtccacagctcagatatttatttct 398
Query: 415 catttgtcagtcaaagacccaaagaccttcatttttaaaattccatgattttattttagg 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 catttgtcagtcaaagacccaaagaccttcatttttaaaattccatgattttattttagg 338
Query: 475 atacattttgttgaaagtgagttaattgctttatgccttaccagctatattgggaacaaa 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 atacattttgttgaaagtgagttaattgctttatgccttaccagctatattgggaacaaa 278
Query: 535 aatctttgcatatgttgttaattggttcaattttttcttgacaacttcatacaaatctag 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 aatctttgcatatgttgttaattggttcaattttttcttgacaacttcatacaaatctag 218
Query: 595 aggctttcttccgtttt 611
|||||||||||| ||||
Sbjct: 217 aggctttcttcc-tttt 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1017
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1007
Effective search space: 605207
Effective search space used: 605207
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
