BAC Information

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BAC

Clone NameB6Ng01-001C03
Chromosome7 (Build37)
Map Location 75,146,149 - 75,288,361
singlet/doubletdoublet
Overlap geneIgf1r
Upstream geneAdamts17, Lysmd4, Mef2a, EG665304, Lrrc28, Ttc23, Dmn, LOC665319, LOC100041771
Downstream geneC330024D12Rik, EG434197, LOC100041800, EG384639, Arrdc4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-001C03.bB6Ng01-001C03.g
ACCDH839540DH839541
length1,2411,123
definitionDH839540|Mus musculus domesticus DNA, BAC clone: B6Ng01-001C03, 5' end.DH839541|Mus musculus domesticus DNA, BAC clone: B6Ng01-001C03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,146,149 - 75,147,459)(75,287,223 - 75,288,361)
sequence
gaattccagaggcgggtgttactaggtggcgtgtgtgcaggtgagaggca
ggctgaattgggaagccttactctcagcaccagcaagttacatggcagca
tccctgatcaagatgtgggagctggggagtaggtcagtgccaaggaagtg
gcgccatttcttctgtcttaggggccctgtttcctcttcagaaaaatgag
gaaattagaccaaagggattctcaagttctgtccgctcttctgctttcta
cctcaccctctgatattgcccagttccttccttcagtggctgtcatgtct
agggaatgtctgcttcctttcctccactccactgttctggattccccccc
cacacacacacacacacatacaaggcctcccttgggcttctctcccctct
cggatccttgagaggggctccatcctgtgaggtagcgttcatcccctcct
gagatccttctcaccaggcttctaccagcctcctttcctttgatccctct
ttgtatccgtgacctcctgtcaccctgcctgtctctggcttccataatat
cacaggctgcttaaaaccccatctttgatgctacctctactttgtcctgt
tggaaatggtggtaggctttccctgtgtgttcctttcatcttaccctgtc
tatattgacagttgcttgccatggctcttagtgcctggtcttttgctatg
agcccatggaatcaaactaattaattacatgggtcagaaaactttatggc
tcctgaacagctttaataatggttgggattattagatgctaagaaagcat
agtgaccaagctgtctttccatatacatttcagactttttaaaacaaaag
atttagagtctagaagatggtccagtgattaaaaacagcctccaaattta
tgtgattctcaacttctgtaactctagcttcaaagactctgacaccccct
ctggcctccgtgggcactgcactcatgtgcatagatgtacacacagatag
cagagtcaaaataaaggaaaaaaatgaacaaaaagtctagtatagaccac
ttttcaaaggatcagatcttcctcatctctaaccctctctcagaaacaat
aatctaagtaagtggtatctgcaatgcttgggctagttccctacttccag
aatcgttttaaagtctcttggattctgaattgtttaatgcataggtcata
acgatgaatcgacgcatgcgattaatttaacagtttctctg
gaattctaagtggctgagccttgaggtctcaaagtttgtgaccaatacac
tgtggtggacctgccccggttccagagtcactggaaatattctcatagca
agcaggaagatctcagggacagcagacgtagttctaaatgggcatgtctt
gctagaaggcacagctgatgtgccttttccagtaagcattacaagaagcc
catttccatggttgaaaaatgcaaaggattattctgagccatcccgatga
taaagaggacaacaatttgcctttaaaaaaaaaatggaagctgggcacag
tagcactcttctgtagtctcagaacttaagatggctgaggaagaggagga
cttgggaagaggagttcaaaggctggcaggggaaaacacatcaagacctt
gtttcagatccacaacgtaagcaaaccagaaggtggtggcaaacctggcg
gcgacgcttaggacatctaaatactcaattatttctacttcaaacagtgt
aattcgtacaaactggtagagcacagaagcagaagaacattaaacacagg
atttaataatggatatgtgcacacacatatacactgttgaagagcttgtc
gtctgaaagtttctatgaattaaatatttgttcattaactactcgagttc
acttgcaaggcatgccaggcgccaagggagagcacagaagtgcacaaggc
cttccacacaaagaccaggaaaggagatgtgcacatagataatgagtaag
gcacagacttatgtcataaagatgcgtatcacgaagccaagagcactgcc
agccaagaccatggcgtggaaaggcatgtgtaaagcagtgctcccggcag
gtccatgtatgcatgagaatctgctggagtgatgggtggggggtgggccc
cttagatccatgcatttcaagggaaaactatcaattatcatctttattta
ttatttatgcatgtggagtacactgtcactctcagacaactagatggggc
atcagaattcccactacaatgctgtgagcacatgtgttgctgggaatgac
tcaggactctggagagcaggcagggccttaccatggaccatctcgtcagc
taattatcatctttactgataac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_75146149_75147459
seq2: B6Ng01-001C03.b_42_1282

seq1  GAATTCCAGAGGCGGGTGTTACTAGGTGGCGTGTGTGCAGGTGAGAGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGGCGGGTGTTACTAGGTGGCGTGTGTGCAGGTGAGAGGCA  50

seq1  GGCTGAATTGGGAAGCCTTACTCTCAGCACCAGCAAGTTACATGGCAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAATTGGGAAGCCTTACTCTCAGCACCAGCAAGTTACATGGCAGCA  100

seq1  TCCCTGATCAAGATGTGGGAGCTGGGGAGTAGGTCAGTGCCAAGGAAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGATCAAGATGTGGGAGCTGGGGAGTAGGTCAGTGCCAAGGAAGTG  150

seq1  GCGCCATTTCTTCTGTCTTAGGGGCCCTGTTTCCTCTTCAGAAAAATGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCATTTCTTCTGTCTTAGGGGCCCTGTTTCCTCTTCAGAAAAATGAG  200

seq1  GAAATTAGACCAAAGGGATTCTCAAGTTCTGTCCGCTCTTCTGCTTTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTAGACCAAAGGGATTCTCAAGTTCTGTCCGCTCTTCTGCTTTCTA  250

seq1  CCTCACCCTCTGATATTGCCCAGTTCCTTCCTTCAGTGGCTGTCATGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACCCTCTGATATTGCCCAGTTCCTTCCTTCAGTGGCTGTCATGTCT  300

seq1  AGGGAATGTCTGCTTCCTTTCCTCCACTCCACTGTTCTGGATTCCCCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAATGTCTGCTTCCTTTCCTCCACTCCACTGTTCTGGATTCCCCCCC  350

seq1  CACACACACACACACACATACAAGGCCTCCCTTGGGCTTCTCTCCCCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACATACAAGGCCTCCCTTGGGCTTCTCTCCCCTCT  400

seq1  CGGATCCTTGAGAGGGGCTCCATCCTGTGAGGTAGCGTTCATCCCCTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGATCCTTGAGAGGGGCTCCATCCTGTGAGGTAGCGTTCATCCCCTCCT  450

seq1  GAGATCCTTCTCACCAGGCTTCTACCAGCCTCCTTTCCTTTGATCCCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCCTTCTCACCAGGCTTCTACCAGCCTCCTTTCCTTTGATCCCTCT  500

seq1  TTGTATCCGTGACCTCCTGTCACCCTGCCTGTCTCTGGCTTCCATAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATCCGTGACCTCCTGTCACCCTGCCTGTCTCTGGCTTCCATAATAT  550

seq1  CACAGGCTGCTTAAAACCCCATCTTTGATGCTACCTCTACTTTGTCCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGCTGCTTAAAACCCCATCTTTGATGCTACCTCTACTTTGTCCTGT  600

seq1  TGGAAATGGTGGTAGGCTTTCCCTGTGTGTTCCTTTCATCTTACCCTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATGGTGGTAGGCTTTCCCTGTGTGTTCCTTTCATCTTACCCTGTC  650

seq1  TATATTGACAGTTGCTTGCCATGGCTCTTAGTGCCTGGTCTTTTGCTATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGACAGTTGCTTGCCATGGCTCTTAGTGCCTGGTCTTTTGCTATG  700

seq1  AGCCCATGGAATCAAACTAATTAATTACATGGGTCAGAAAACTTTATGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCATGGAATCAAACTAATTAATTACATGGGTCAGAAAACTTTATGGC  750

seq1  TCCTGAACAGCTTTAATAATGGTTGGGATTATTAGATGCTAAGAAAGCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAACAGCTTTAATAATGGTTGGGATTATTAGATGCTAAGAAAGCAT  800

seq1  AGTGACCAAGGCTGTCTTTCCATATACATTTCAGACTTTTTAAAACAAAA  850
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACCAA-GCTGTCTTTCCATATACATTTCAGACTTTTTAAAACAAAA  849

seq1  GATTTAGAGTCTAGAAGATGGTCCAGTGATTAAAAACAGCCTCCAAATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAGAGTCTAGAAGATGGTCCAGTGATTAAAAACAGCCTCCAAATTT  899

seq1  ATGTGATTCTCAACTTCTGTAACTCTAGCTTCAAAGACTCTGACACCCCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGATTCTCAACTTCTGTAACTCTAGCTTCAAAGACTCTGACACCCCC  949

seq1  TCTGGCCTCCGTGGGCACTGCACTCATGTGCATAGATGTACACACAGATA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCCTCCGTGGGCACTGCACTCATGTGCATAGATGTACACACAGATA  999

seq1  GCAGAGTCAAAAATAAAGAAAAAAAATGAAACAAAAAGTTCTAGTATTAA  1050
      |||||||| ||||||||| ||||||||| ||||||||| ||||||||  |
seq2  GCAGAGTC-AAAATAAAGGAAAAAAATG-AACAAAAAG-TCTAGTAT--A  1044

seq1  GACCACTTTACCAAAAAGACACACACACACACACACACACACACACACAC  1100
      ||||||||| |   ||||   || |      |   | ||  | |  || |
seq2  GACCACTTTTC---AAAGGATCAGA-----TCTTCCTCA-TCTCTAACCC  1085

seq1  ACACAAAGAAACAAAATTAATACATAAGTAAAAAGTTGTAATCTGCAAAT  1150
       | |  ||||||||   ||||   |||||   |||| || |||||| |||
seq2  TCTCTCAGAAACAA---TAAT--CTAAGT---AAGTGGT-ATCTGC-AAT  1125

seq1  GCCTTGGGCTAGTTCCTCTACTTCCAGGATCTGTTCTAAGAAAGTGCTCT  1200
      | |||||||||||||| |||||||||| ||| ||| |   ||||| ||||
seq2  G-CTTGGGCTAGTTCC-CTACTTCCAGAATC-GTTTT---AAAGT-CTCT  1168

seq1  TGGATATCTGGAATATTGTTTATAATGTGAAAAATTAGAGATGACTAATT  1250
      ||||| ||||    ||||||  |||||         | || | |     |
seq2  TGGAT-TCTG---AATTGTT--TAATG--------CATAGGTCA-----T  1199

seq1  AACAGTAGAGAATCAGAACAAGGGACTAGTACGTATTAATAATTTAAAAC  1300
      |||  |   |||||         |||   | ||    | ||||||||   
seq2  AACGAT---GAATC---------GACGCATGCG----ATTAATTTAA---  1230

seq1  AAGTTTCTCTG  1311
       ||||||||||
seq2  CAGTTTCTCTG  1241

seq1: chr7_75287223_75288361
seq2: B6Ng01-001C03.g_66_1188 (reverse)

seq1  GTTATCAGTAAAGATGATAATTAGGCTGGAGAGATGGCTCAGTGGTTAAA  50
      ||||||||||||||||||||||| ||||  ||||||| ||  ||||  ||
seq2  GTTATCAGTAAAGATGATAATTA-GCTGACGAGATGG-TCCATGGT--AA  46

seq1  AGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACA  100
       || ||| |||||| |||||| |||||||||   ||||||||||| ||||
seq2  GGCCCTGCCTGCTC-TCCAGA-GTCCTGAGT--CATTCCCAGCAA-CACA  91

seq1  TGGTGGCTCACAGCCATTTGTAGTGGGAA-TCTGATGCCCCCTTCTAGTG  149
      ||   |||||||||   |||||||||||| ||||||| |||| |||||| 
seq2  TG--TGCTCACAGC--ATTGTAGTGGGAATTCTGATG-CCCCATCTAGT-  135

seq1  TGTCTGAAGAGTGACAGTGTACT-CACATGCATAAAATAAATAAATAAAG  198
      |||||| |||||||||||||||| ||||||||||||   |||||||||||
seq2  TGTCTG-AGAGTGACAGTGTACTCCACATGCATAAA--TAATAAATAAAG  182

seq1  ATGATAATTGATAGTTTTCCCTTGAAATGCATGGATCTAAGGGGCCCACC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAATTGATAGTTTTCCCTTGAAATGCATGGATCTAAGGGGCCCACC  232

seq1  CCC--ACCATCACTCCAGCAGATTCTCATGCATACATGGACCCTGCCGGG  296
      |||   |||||||||||||||||||||||||||||||||| |||||||||
seq2  CCCCACCCATCACTCCAGCAGATTCTCATGCATACATGGA-CCTGCCGGG  281

seq1  AGCACCTGCTTTACACATGCCTTTCCACGCCATGGTCTTGGCTGGCAGTG  346
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCA-CTGCTTTACACATGCCTTTCCACGCCATGGTCTTGGCTGGCAGTG  330

seq1  CTCTTGGCTTCCTGATACGCATCTTTATGACATAAGTCTGTGCCTTACTC  396
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGGCTTCGTGATACGCATCTTTATGACATAAGTCTGTGCCTTACTC  380

seq1  ATTATCTATGTGCACATCTCCTTTCCTGGTCTTTGTGTGGAAGGCCTTGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTATGTGCACATCTCCTTTCCTGGTCTTTGTGTGGAAGGCCTTGT  430

seq1  GCACTTCTGTGCTCTCCCTTGGCGCCTGGCATGCCTTGCAAGTGAACTCG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTCTGTGCTCTCCCTTGGCGCCTGGCATGCCTTGCAAGTGAACTCG  480

seq1  AGTAGTTAATGAACAAATATTTAATTCATAGAAACTTTCAGACGACAAGC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTAATGAACAAATATTTAATTCATAGAAACTTTCAGACGACAAGC  530

seq1  TCTTCAACAGTGTATATGTGTGTGCACATATCCATTATTAAATCCTGTGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAACAGTGTATATGTGTGTGCACATATCCATTATTAAATCCTGTGT  580

seq1  TTAATGTTCTTCTGCTTCTGTGCTCTACCAGTTTGTACGAATTACACTGT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTTCTTCTGCTTCTGTGCTCTACCAGTTTGTACGAATTACACTGT  630

seq1  TTGAAGTAGAAATAATTGAGTATTTAGATGTCCTAAGCGTCGCCGCCAGG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTAGAAATAATTGAGTATTTAGATGTCCTAAGCGTCGCCGCCAGG  680

seq1  TTTGCCACCACCTTCTGGTTTGCTTACGTTGTGGATCTGAAACAAGGTCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCACCACCTTCTGGTTTGCTTACGTTGTGGATCTGAAACAAGGTCT  730

seq1  TGATGTGTTTTCCCCTGCCAGCCTTTGAACTCCTCTTCCCAAGTCCTCCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTGTTTTCCCCTGCCAGCCTTTGAACTCCTCTTCCCAAGTCCTCCT  780

seq1  CTTCCTCAGCCATCTTAAGTTCTGAGACTACAGAAGAGTGCTACTGTGCC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCAGCCATCTTAAGTTCTGAGACTACAGAAGAGTGCTACTGTGCC  830

seq1  CAGCTTCCATTTTTTTTTTAAAGGCAAATTGTTGTCCTCTTTATCATCGG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTCCATTTTTTTTTTAAAGGCAAATTGTTGTCCTCTTTATCATCGG  880

seq1  GATGGCTCAGAATAATCCTTTGCATTTTTCAACCATGGAAATGGGCTTCT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTCAGAATAATCCTTTGCATTTTTCAACCATGGAAATGGGCTTCT  930

seq1  TGTAATGCTTACTGGAAAAGGCACATCAGCTGTGCCTTCTAGCAAGACAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATGCTTACTGGAAAAGGCACATCAGCTGTGCCTTCTAGCAAGACAT  980

seq1  GCCCATTTAGAACTACGTCTGCTGTCCCTGAGATCTTCCTGCTTGCTATG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATTTAGAACTACGTCTGCTGTCCCTGAGATCTTCCTGCTTGCTATG  1030

seq1  AGAATATTTCCAGTGACTCTGGAACCGGGGCAGGTCCACCACAGTGTATT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATTTCCAGTGACTCTGGAACCGGGGCAGGTCCACCACAGTGTATT  1080

seq1  GGTCACAAACTTTGAGACCTCAAGGCTCAGCCACTTAGAATTC  1139
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACAAACTTTGAGACCTCAAGGCTCAGCCACTTAGAATTC  1123