BAC Information

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BAC

Clone NameB6Ng01-002B08
Chromosome7 (Build37)
Map Location 70,221,611 - 70,375,433
singlet/doubletdoublet
Overlap geneChrna7
Upstream geneNdn, Magel2, Mkrn3, Peg12, Atp5l-ps1, EG665038, LOC669222, LOC384631, LOC622243, EG622251
Downstream geneOtud7a, LOC545971, LOC100041386, LOC665083, Klf13, E030018B13Rik, Trpm1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-002B08.bB6Ng01-002B08.g
ACCDH840216DH840217
length9251,149
definitionDH840216|Mus musculus domesticus DNA, BAC clone: B6Ng01-002B08, 5' end.DH840217|Mus musculus domesticus DNA, BAC clone: B6Ng01-002B08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,221,611 - 70,222,533)(70,374,274 - 70,375,433)
sequence
gaattccttccccaatttataggcagcttcactaagccatttctttttct
ccatcagttattcatcacattgtatggaggggctcctgagtgttggaagt
tgcataaacttcatgggccttttaagtttaattaacttttttcaggctta
tgaacttttcctctctctagggagaggatgttttaatttagagaaaatat
acaacaccctacaggaaagcatgattagatttctgagagacacagaggaa
atatacaccagtccctcactagcctgggttttgttttttaagattttagt
tacctgcagccaactaccattataaatattgaatagaaagttcccctact
cataattttgaagtaatacaccagctaaataccacaatgaaatctaacac
tacccctcccatcatacctggaatctgtgtaattcctccatccatcacag
ctggctattctggctaggcgtttcacagttgtcacactatcttagcatgt
gcatgcaggattgcatactatctgagatttcaagcactcactagctgtct
tggaatatgcttctgacatttaaggtgaggactatactatggaagaataa
aagttggggagaataaagtgatgggatatgagaacataccatgaaacaaa
taatatatatggcttccagaagattaacagaaatcctctgcaagaggctc
cagattctctgctagaggctagaggctccagaaggaacctaaaagtccaa
catgattttccttctaagattgatttggtatacttgaccactacagctgt
catggaatattattgtattgtttctattacagaatacattttctaataaa
tttatgggtgggtagaggaaaggaaaaaaggctctatagatgccccagtg
aaggtagggtgggggaggtgagagt
gaattcagtagtctgtacttgcctggaggtctctgttgaattttgatctt
tgtaatattggtgtcatgcagagttaaatatacacatagacaggcattga
aaaggctgaagaggtattgggatagatagagcatggctccttcacaccaa
gacctgtaagcttcactcactccttccaagaagcccccatgctaatcaaa
agctgcagtgagaagcatagttttgtcatcagttagtctatgaaccccaa
cccttgctctccagaactcaaagccacacttccacaacaaaggtttgaaa
gaactaatttcagatagagtcagtgattggaaagtattgaggccatacaa
gaaagattttcttgtagggaaaatacagaaaaaaaaaaggataagagaaa
ggtaaacaaaactacagattttaattttaaagagagaattaaaatatatc
aactggtgaaacctatatcctaacactttaaaactgtctattaaggaaat
agaaaatatgagataacataaattaggtgccaggattcagggatgagaca
tctaaaaagaacatcattttataaatagccaaaggaccaattcaaataat
cacaatactaccctcctatgaaaaaatgcagaagagaaagatttttaaaa
agaagttgtatcaagaagttgagagaaagttgataatgtggaaaactgct
tcatctactagctaaaaacaagacagaccaaaagaaaagcatacagatca
aaagagaaacctaaaacaaaggaaaaaaagaaatatcacagacatacaca
ttaacaagctttaaagccttgaaaccgtacaaagaagacttctgcaaccc
ttggaaattcaacccagagctgttttaggatatatggttgaaatgtccaa
ctttaactgaaagaaaaatgctctttgaggatccagattgaaaaaaaaac
caaaaacaaagatataaaacagaaagaaggaaggggattatattccaatc
agacctttcagagctgtacttcgtgcagagaaaaatattatttcaatata
ctagctttagaaatgagcccagaactttatgtctggtgaaatgactttca
gtaagaggagggaacattcagtctgcaggatgcgagaaatttaaggaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_70221611_70222533
seq2: B6Ng01-002B08.b_46_970

seq1  GAATTCCTTCCCCAATTTATAGGCAGCTTCACTAAGCCATTTCTTTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCCCCAATTTATAGGCAGCTTCACTAAGCCATTTCTTTTTCT  50

seq1  CCATCAGTTATTCATCACATTGTATGGAGGGGCTCCTGAGTGTTGGAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAGTTATTCATCACATTGTATGGAGGGGCTCCTGAGTGTTGGAAGT  100

seq1  TGCATAAACTTCATGGGCCTTTTAAGTTTAATTAACTTTTTTCAGGCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAAACTTCATGGGCCTTTTAAGTTTAATTAACTTTTTTCAGGCTTA  150

seq1  TGAACTTTTCCTCTCTCTAGGGAGAGGATGTTTTAATTTAGAGAAAATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTTTCCTCTCTCTAGGGAGAGGATGTTTTAATTTAGAGAAAATAT  200

seq1  ACAACACCCTACAGGAAAGCATGATTAGATTTCTGAGAGACACAGAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACACCCTACAGGAAAGCATGATTAGATTTCTGAGAGACACAGAGGAA  250

seq1  ATATACACCAGTCCCTCACTAGCCTGGGTTTTGTTTTTTAAGATTTTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACACCAGTCCCTCACTAGCCTGGGTTTTGTTTTTTAAGATTTTAGT  300

seq1  TACCTGCAGCCAACTACCATTATAAATATTGAATAGAAAGTTCCCCTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGCAGCCAACTACCATTATAAATATTGAATAGAAAGTTCCCCTACT  350

seq1  CATAATTTTGAAGTAATACACCAGCTAAATACCACAATGAAATCTAACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTTTGAAGTAATACACCAGCTAAATACCACAATGAAATCTAACAC  400

seq1  TACCCCTCCCATCATACCTGGAATCTGTGTAATTCCTCCATCCATCACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCTCCCATCATACCTGGAATCTGTGTAATTCCTCCATCCATCACAG  450

seq1  CTGGCTATTCTGGCTAGGCGTTTCACAGTTGTCACACTATCTTAGCATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTATTCTGGCTAGGCGTTTCACAGTTGTCACACTATCTTAGCATGT  500

seq1  GCATGCAGGATTGCATACTATCTGAGATTTCAAGCACTCACTAGCTGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCAGGATTGCATACTATCTGAGATTTCAAGCACTCACTAGCTGTCT  550

seq1  TGGAATATGCTTCTGACATTTAAGGTGAGGACTATACTATGGAAGAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATATGCTTCTGACATTTAAGGTGAGGACTATACTATGGAAGAATAA  600

seq1  AAGTTGGGGAGAATAAAGTGATGGGATATGAGAACATACCATGAAACAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGGGGAGAATAAAGTGATGGGATATGAGAACATACCATGAAACAAA  650

seq1  TAATATATATGGCTTCCAGAAGATTAACAGAAATCCTCTGCAAGAGGCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATATATGGCTTCCAGAAGATTAACAGAAATCCTCTGCAAGAGGCTC  700

seq1  CAGATTCTCTGCTAGAGGCTAGAGGCTCCAGAAGGAACCTAAAAGTCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTCTCTGCTAGAGGCTAGAGGCTCCAGAAGGAACCTAAAAGTCCAA  750

seq1  CATGATTTTCCTTCTAAGATTGATTTGGTATACTTGACCACTACAGCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTTTCCTTCTAAGATTGATTTGGTATACTTGACCACTACAGCTGT  800

seq1  CATGGAATATAATTGTATTGTTTCTATTACAGAATACA-TTTCTAATAAA  849
      |||||||||| ||||||||||||||||||||||||||| |||||||||||
seq2  CATGGAATATTATTGTATTGTTTCTATTACAGAATACATTTTCTAATAAA  850

seq1  TTTATGGGTGGGTAGAGGAAAGGAAAAAAGGCTCTATAGATGCCCCAGTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGGGTGGGTAGAGGAAAGGAAAAAAGGCTCTATAGATGCCCCAGTG  900

seq1  AAGGTAGGGT-GGGGAGGTGAGAGT  923
      |||||||||| ||||||||||||||
seq2  AAGGTAGGGTGGGGGAGGTGAGAGT  925

seq1: chr7_70374274_70375433
seq2: B6Ng01-002B08.g_70_1218 (reverse)

seq1  ATTCCCTAAATTTTCTGCATACTGCAGACTGATTGTTCCCT-CTCTACTT  49
      ||||| |||||||   |||| ||||||||||| |||||||| ||||   |
seq2  ATTCCTTAAATTTCTCGCATCCTGCAGACTGAATGTTCCCTCCTCTTACT  50

seq1  GAAAGTCATTTCACCCAGACATAAAGTCTTGGGCTCATTTCCTTAAAAAC  99
      ||||||||||||| |||||||||||||  ||||||||||||     ||| 
seq2  GAAAGTCATTTCA-CCAGACATAAAGTTCTGGGCTCATTTC----TAAAG  95

seq1  CTAGTATATTGAAAT-ATATTTTTCTTCTGGCACGAAGTACAGCTCTTGA  148
      ||||||||||||||| ||||||||| ||| |||||||||||||||| |||
seq2  CTAGTATATTGAAATAATATTTTTC-TCT-GCACGAAGTACAGCTC-TGA  142

seq1  AAGGTCTGATTGGAATATAATCCCCTTCCTTCTTTTCTGTTTTATATTCT  198
      |||||||||||||||||||||||||||||||| ||||||||||||| |||
seq2  AAGGTCTGATTGGAATATAATCCCCTTCCTTC-TTTCTGTTTTATA-TCT  190

seq1  TTGTTTTTGGTTTTTTTTTTTCAATCTGGATCCTCAAAGAGCATTTTTCT  248
      ||||||||||  ||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTGG--TTTTTTTTTCAATCTGGATCCTCAAAGAGCATTTTTCT  238

seq1  TTCAGTTTAAAGTTGGACATTTCAACCATATATCCTAAAACAGCTCTGGG  298
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAG-TTAAAGTTGGACATTTCAACCATATATCCTAAAACAGCTCTGGG  287

seq1  TTGAATTTCCAAGGGTTGCAGAAGTCTTCTTTGTACGGTTTCAAGGCTTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTTCCAAGGGTTGCAGAAGTCTTCTTTGTACGGTTTCAAGGCTTT  337

seq1  AAAGCTTGTTAATGTGTATGTCTGTGATATTTCTTTTTTTCCTTTGTTTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTGTTAATGTGTATGTCTGTGATATTTCTTTTTTTCCTTTGTTTT  387

seq1  AGGTTTCTCTTTTGATCTGTATGCTTTTCTTTTGGTCTGTCTTGTTTTTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCTCTTTTGATCTGTATGCTTTTCTTTTGGTCTGTCTTGTTTTTA  437

seq1  GCTAGTAGATGAAGCAGTTTTCCACATTATCAACTTTCTCTCAACTTCTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTAGATGAAGCAGTTTTCCACATTATCAACTTTCTCTCAACTTCTT  487

seq1  GATACAACTTCTTTTTAAAAATCTTTCTCTTCTGCATTTTTTCATAGGAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAACTTCTTTTTAAAAATCTTTCTCTTCTGCATTTTTTCATAGGAG  537

seq1  GGTAGTATTGTGATTATTTGAATTGGTCCTTTGGCTATTTATAAAATGAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTATTGTGATTATTTGAATTGGTCCTTTGGCTATTTATAAAATGAT  587

seq1  GTTCTTTTTAGATGTCTCATCCCTGAATCCTGGCACCTAATTTATGTTAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTTTAGATGTCTCATCCCTGAATCCTGGCACCTAATTTATGTTAT  637

seq1  CTCATATTTTCTATTTCCTTAATAGACAGTTTTAAAGTGTTAGGATATAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATATTTTCTATTTCCTTAATAGACAGTTTTAAAGTGTTAGGATATAG  687

seq1  GTTTCACCAGTTGATATATTTTAATTCTCTCTTTAAAATTAAAATCTGTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCACCAGTTGATATATTTTAATTCTCTCTTTAAAATTAAAATCTGTA  737

seq1  GTTTTGTTTACCTTTCTCTTATCCTTTTTTTTTTCTGTATTTTCCCTACA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTACCTTTCTCTTATCCTTTTTTTTTTCTGTATTTTCCCTACA  787

seq1  AGAAAATCTTTCTTGTATGGCCTCAATACTTTCCAATCACTGACTCTATC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATCTTTCTTGTATGGCCTCAATACTTTCCAATCACTGACTCTATC  837

seq1  TGAAATTAGTTCTTTCAAACCTTTGTTGTGGAAGTGTGGCTTTGAGTTCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTAGTTCTTTCAAACCTTTGTTGTGGAAGTGTGGCTTTGAGTTCT  887

seq1  GGAGAGCAAGGGTTGGGGTTCATAGACTAACTGATGACAAAACTATGCTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGCAAGGGTTGGGGTTCATAGACTAACTGATGACAAAACTATGCTT  937

seq1  CTCACTGCAGCTTTTGATTAGCATGGGGGCTTCTTGGAAGGAGTGAGTGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGCAGCTTTTGATTAGCATGGGGGCTTCTTGGAAGGAGTGAGTGA  987

seq1  AGCTTACAGGTCTTGGTGTGAAGGAGCCATGCTCTATCTATCCCAATACC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTACAGGTCTTGGTGTGAAGGAGCCATGCTCTATCTATCCCAATACC  1037

seq1  TCTTCAGCCTTTTCAATGCCTGTCTATGTGTATATTTAACTCTGCATGAC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGCCTTTTCAATGCCTGTCTATGTGTATATTTAACTCTGCATGAC  1087

seq1  ACCAATATTACAAAGATCAAAATTCAACAGAGACCTCCAGGCAAGTACAG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATATTACAAAGATCAAAATTCAACAGAGACCTCCAGGCAAGTACAG  1137

seq1  ACTACTGAATTC  1160
      ||||||||||||
seq2  ACTACTGAATTC  1149