BAC Information

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BAC

Clone NameB6Ng01-002H21
Chromosome7 (Build37)
Map Location 112,489,072 - 112,490,197
singlet/doubletsinglet
Overlap genenone
Upstream gene9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035, Olfr688, Olfr689, Olfr690, Olfr691
Downstream geneOlfr692, EG545989, 4632419K20Rik, Cnga4, EG244189, Cckbr, Prkcdbp, Smpd1, Apbb1, Hpxn, Trim3, Arfip2, Fxc1, Dnhd1, LOC100042811, LOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17, 9130208D14Rik, LOC626055, LOC100042856, LOC100042047, EG668108, EG668117, Gvin1, LOC672660, LOC100042097, LOC668128
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-002H21.bB6Ng01-002H21.g
ACCDH840498DH840499
length9221,137
definitionDH840498|Mus musculus domesticus DNA, BAC clone: B6Ng01-002H21, 5' end.DH840499|Mus musculus domesticus DNA, BAC clone: B6Ng01-002H21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttggcttttccaagacacatcatgaaggggtgttagattttgtc
aaatgctttcttagcacttaatgaaatgatcacatgggtgggtttttttt
ttttagtttgattatatagtggactatgttgatggattttcgtatattga
cctatccatgcatccctggcatgaagcctagttgatcatgatggatgatc
attttgatttgttcttggattcagtttacaagaattttattgggtatttt
tgcatagatattcataagggaaattggtctgaagttctctttctttgtgg
gtctttgtgtagtttagatatcagagtaattgtggtttcatagaacgagt
tggatagagttccttctgtttctattttgtggaatagtttgaagagcatt
ggtattaggtcttctttgaaggtctgacaaggactctgaactaaactcat
ctggtcctgggctttttttggctgggagactattaatgactgtttctatt
tctttaggggatatgggactatttagatcgttaatctgatcctgatttaa
ctttggtacctggtatctgtctagaaaattgtccatttgatccatatttt
ccagttctgttgaatataggcttttgtagtagagtctgatgattctttgg
gtttccacggtttccattgttatgtctcactttttcatttctgattttat
taatttggatacagtctctgttccctctggttagtctagctaaaagttta
tcttacccccccctgctaaaaaacaagctcctggttttgttgaccttttt
gtatagttcttttttgtttctacttggtttgatttcagccctgagtttga
ttgtttcctgccatcacttctcctgggtatatttgcttctttttgtccag
acctttgagggtatgctgttca
gaattccttaattgtttgttttatttatctttgttatttttatgtgtgtg
taacgtatgtgtcatggatgctgcatgtgtggagatcagaggaggacttt
tggcagatagttctctcttgtgggttctgcagatctaaatcaggtcctga
ggcttgtgtgccagggcttttacccactgagccatggcattagctcaggt
gagaactgttcaggacatttattccttggtaatttgggagtctgatttac
tcagcttctaaactcattctgtccactctcttgcattttggagagcatca
atagaacatgtaaatttttgttaggcagagaaaataaattcaagggatct
atttttcaccatagtggctgtggttaataagagcatattatctatttaaa
attgctttgaaagtagattttaaatgtctgatgtgaaataatatgcataa
tacttcactttattagatatgttatagtaatttatatgtatataaatata
taatatgtgtgtatgtataatgttgtatactctacatgaacttttatttg
ttaaaaatgacttaccaattctctaaagatgtggtagtgagtcagggact
cttggtgcctctgcagtctagctaatgctgactttagattgtgaccctgg
ggcatgctgtctgagtgcctgtgggcaggagtgaggactaaatctgaatt
tgtatcaatacattgaaaggtaaacattttacaaattgcaaacttcgccc
cattaatgtgtacaattaatgcatgttagtgaggacagttaaagaaaaat
gaagttctgtgatacaactcacagtaaacctgctataacgtacgctgtta
tgtctgacagatgcacgacttcagtgtgcaggtagagagtctgaatggtg
gaaaactcttgaaatacgaaaggcatttacaaggaagatggcaaagtgaa
attaatacatgtattaataagtatccagggtgattcagctaggcaaaaag
cagcctcctgtagtcacttagcagttccatagatggggatgtatgaagtt
catctcctggtcatattataatagattataaaaacctccaaaatccggct
gtaagaattacaaaaaggtctttgtgttactctcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_112489072_112490197
seq2: B6Ng01-002H21.g_66_1202 (reverse)

seq1  TCTG-GAGTTACACAAAGACC-TTTTGTATCTC-TACAGCCTGAATTTGG  47
      |||| |||| ||||||||||| |||||||  || ||||||| || |||||
seq2  TCTGAGAGTAACACAAAGACCTTTTTGTAATTCTTACAGCCGGATTTTGG  50

seq1  AAGACTTTAT-ATC-ATAATAATATGA-CAG--GATGAAC-TCATACATC  91
      | |  ||||| ||| || ||||||||| |||  ||||||| |||||||||
seq2  AGGTTTTTATAATCTATTATAATATGACCAGGAGATGAACTTCATACATC  100

seq1  CCATCCTATGGAACTGCTAGGTGACTACATGA-GCTGCTTTTTGCCTAGC  140
      ||   |||||||||||||| ||||||||| || |||||||||||||||||
seq2  CCCATCTATGGAACTGCTAAGTGACTACAGGAGGCTGCTTTTTGCCTAGC  150

seq1  TGAATCA-CCTGGATACTTATTAATACATGTATTAATTTCACTTTGCCAT  189
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCACCCTGGATACTTATTAATACATGTATTAATTTCACTTTGCCAT  200

seq1  CTTCCTTGTAAATGCCTTTCGTATTTCAAGAGTTTTCCACCATTCAGACT  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTGTAAATGCCTTTCGTATTTCAAGAGTTTTCCACCATTCAGACT  250

seq1  CTCTACCTGCACACTGAAGTCGTGCATCTGTCAGACATAACAGCGTACGT  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACCTGCACACTGAAGTCGTGCATCTGTCAGACATAACAGCGTACGT  300

seq1  TATAGCAGGTTTACTGTGAGTTGTATCACAGAACTTCATTTTTCTTTAAC  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCAGGTTTACTGTGAGTTGTATCACAGAACTTCATTTTTCTTTAAC  350

seq1  TGTCCTCACTAACATGCATTAATTGTACACATTAATGGGGCGAAGTTTGC  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCACTAACATGCATTAATTGTACACATTAATGGGGCGAAGTTTGC  400

seq1  AATTTGTAAAATGTTTACCTTTCAATGTATTGATACAAATTCAGATTTAG  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTAAAATGTTTACCTTTCAATGTATTGATACAAATTCAGATTTAG  450

seq1  TCCTCACTCCTGCCCACAGGCACTCAGACAGCATGCCCCAGGGTCACAAT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCACTCCTGCCCACAGGCACTCAGACAGCATGCCCCAGGGTCACAAT  500

seq1  CTAAAGTCAGCATTAGCTAGACTGCAGAGGCACCAAGAGTCCCTGACTCA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGTCAGCATTAGCTAGACTGCAGAGGCACCAAGAGTCCCTGACTCA  550

seq1  CTACCACATCTTTAGAGAATTGGTAAGTCATTTTTAACAAATAAAAGTTC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCACATCTTTAGAGAATTGGTAAGTCATTTTTAACAAATAAAAGTTC  600

seq1  ATGTAGAGTATACAACATTATACATACACACATATTATATATTTATATAC  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGAGTATACAACATTATACATACACACATATTATATATTTATATAC  650

seq1  ATATAAATTACTATAACATATCTAATAAAGTGAAGTATTATGCATATTAT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAATTACTATAACATATCTAATAAAGTGAAGTATTATGCATATTAT  700

seq1  TTCACATCAGACATTTAAAATCTACTTTCAAAGCAATTTTAAATAGATAA  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATCAGACATTTAAAATCTACTTTCAAAGCAATTTTAAATAGATAA  750

seq1  TATGCTCTTATTAACCACAGCCACTATGGTGAAAAATAGATCCCTTGAAT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTCTTATTAACCACAGCCACTATGGTGAAAAATAGATCCCTTGAAT  800

seq1  TTATTTTCTCTGCCTAACAAAAATTTACATGTTCTATTGATGCTCTCCAA  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCTCTGCCTAACAAAAATTTACATGTTCTATTGATGCTCTCCAA  850

seq1  AATGCAAGAGAGTGGACAGAATGAGTTTAGAAGCTGAGTAAATCAGACTC  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAAGAGAGTGGACAGAATGAGTTTAGAAGCTGAGTAAATCAGACTC  900

seq1  CCAAATTACCAAGGAATAAATGTCCTGAACAGTTCTCACCTGAGCTAATG  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTACCAAGGAATAAATGTCCTGAACAGTTCTCACCTGAGCTAATG  950

seq1  CCATGGCTCAGTGGGTAAAAGCCCTGGCACACAAGCCTCAGGACCTGATT  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGCTCAGTGGGTAAAAGCCCTGGCACACAAGCCTCAGGACCTGATT  1000

seq1  TAGATCTGCAGAACCCACAAGAGAGAACTATCTGCCAAAAGTCCTCCTCT  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCTGCAGAACCCACAAGAGAGAACTATCTGCCAAAAGTCCTCCTCT  1050

seq1  GATCTCCACACATGCAGCATCCATGACACATACGTTACACACACATAAAA  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCCACACATGCAGCATCCATGACACATACGTTACACACACATAAAA  1100

seq1  ATAACAAAGATAAATAAAACAAACAATTAAGGAATTC  1126
      |||||||||||||||||||||||||||||||||||||
seq2  ATAACAAAGATAAATAAAACAAACAATTAAGGAATTC  1137