BAC Information

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BAC

Clone NameB6Ng01-002K07
Chromosome7 (Build37)
Map Location 143,041,739 - 143,185,931
singlet/doubletdoublet
Overlap geneLOC668764
Upstream geneDock1, B830028B13Rik, EG668693, LOC100043254, Foxi2, Clrn3, Ptpre, Mki67
Downstream geneLOC546009, EG621677, EG668771, Mgmt
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-002K07.bB6Ng01-002K07.g
ACCDH840606DH840607
length9091,124
definitionDH840606|Mus musculus domesticus DNA, BAC clone: B6Ng01-002K07, 5' end.DH840607|Mus musculus domesticus DNA, BAC clone: B6Ng01-002K07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(143,041,739 - 143,042,645)(143,184,797 - 143,185,931)
sequence
gaattccaggatagccagggctacacagagaaaccctgtcttgaaaaacc
caaacagaaccagggctagagagagggctcagtggttaagggctctctta
tcggtcttgtagaagaccagcgtttagttttctgcactcacatggggtag
ctcacaacttcctagaactccagctccagggaatctaatgtcttcttctg
gcctctgtgcacaccagcatgtacatgtgcatactcgtacagagacagac
ggacagatggatgggcagacagaaacaaattcccttcttctctcctttcc
tctccccacttacgctctgtattttcccatccagcaaatttggggactgc
ctgtgtatgatgttggcaggtgccggggaggccaccgtaacagatgtatt
tcctcatctccacaaaacacagccatctcattcatgagacggagggacac
acatcagcctcctagatgatacctagctgatgtttgcttgtgctcagggg
gagcccctggtgtaacttgctttggggtgcagaggaagaagccaccccag
gggtgcagaagtctgatctggagcttgagaactctatgggatttcaccag
aagggcgagaaggggagcgcgctccacgctctggatcaggaagccccgtg
gccaggtgcagaggagggtggggcctgtgtaacagggcaatgcaaagcat
ttcttgagtcttcctgcataatcatcactcataccgagtctagtgctgaa
cattctcaaagcttttcaaggaacttcgaccttcaccagcctctcctatg
ttattggccaactgagtgacaattttataaacaacgccaacatatttaag
tgttctcagtctttgccatgaagggagtgtgatcctaagagaaagggggg
ggggggatg
gaattcaatggctggctcgggaagcaagaggtggtttatggggcatctct
cagggaacagtgttatagtaaagttaggtgacaggagaaataaagatggc
ggtgtttaactacaaaactccaaataaaaaaatatactgtcttcctttct
ttgccgaacaagcagagttattattaccgttgttgttttatggccttttt
catagaaaaattacaacgtgaaggttgccaaatgcaagagtatagttata
tatgactgtacctggactcagacaccactgcctcaccaggctgtcacatt
cccaagctggctgtcaaacacacagacacctgctttgtgtctcccctaac
tagggagactgggtcttccataccaagtctcagaggctgcagaacctggg
gcctcatcaggcctttggtgtccaagattggagtcccagcctggaaacca
gactaccccacgagtgcccaggctagagtgccaagtctggagaccaagtt
acctctagagtggatgacagtacccaattctcagctcaggccacctggga
gaaagcagaagcagcgtcagcaggcacacagagggaaaggctcctggtac
acaccagctgctgttttccaaactattgggatgatggcagctgggacagg
ggttctctagaaatctgcctgcttcccacactctcctctctgcatgttct
gttcagtgcttgattgtagtcttcaacaggatcatgaagacccatgcata
gtcaattccatcttcacggtggtcctatggggtagacacatccattctgt
cttatggatgaaagcatggaaatggaagagcaaagatattagttcaggtt
ttcatttatagactagttgctggagatacttatcacccatggacccttag
gactgaaaacaacattctaaccttctattattctttccccaagtccttct
ttggttcagtgatggtcttaacagtcagtgggccagctcacccagacgac
aagtgatatggtcttactgggggactgacttgtgacatcatatttcacta
ctgcatttgtatttctgcagttccaaccgacaccagacaaatcgagcgat
ctttctgttcatgaaataagaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_143041739_143042645
seq2: B6Ng01-002K07.b_47_955

seq1  GAATTCCAGGATAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGATAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAAAACC  50

seq1  CAAACAGAACCAGGGCTAGAGAGAGGGCTCAGTGGTTAAGGGCTCTCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGAACCAGGGCTAGAGAGAGGGCTCAGTGGTTAAGGGCTCTCTTA  100

seq1  TCGGTCTTGTAGAAGACCAGCGTTTAGTTTTCTGCACTCACATGGGGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTCTTGTAGAAGACCAGCGTTTAGTTTTCTGCACTCACATGGGGTAG  150

seq1  CTCACAACTTCCTAGAACTCCAGCTCCAGGGAATCTAATGTCTTCTTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAACTTCCTAGAACTCCAGCTCCAGGGAATCTAATGTCTTCTTCTG  200

seq1  GCCTCTGTGCACACCAGCATGTACATGTGCATACTCGTACAGAGACAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGTGCACACCAGCATGTACATGTGCATACTCGTACAGAGACAGAC  250

seq1  GGACAGATGGATGGGCAGACAGAAACAAATTCCCTTCTTCTCTCCTTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGATGGATGGGCAGACAGAAACAAATTCCCTTCTTCTCTCCTTTCC  300

seq1  TCTCCCCACTTACGCTCTGTATTTTCCCATCCAGCAAATTTGGGGACTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCACTTACGCTCTGTATTTTCCCATCCAGCAAATTTGGGGACTGC  350

seq1  CTGTGTATGATGTTGGCAGGTGCCGGGGAGGCCACCGTAACAGATGTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTATGATGTTGGCAGGTGCCGGGGAGGCCACCGTAACAGATGTATT  400

seq1  TCCTCATCTCCACAAAACACAGCCATCTCATTCATGAGACGGAGGGACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATCTCCACAAAACACAGCCATCTCATTCATGAGACGGAGGGACAC  450

seq1  ACATCAGCCTCCTAGATGATACCTAGCTGATGTTTGCTTGTGCTCAGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAGCCTCCTAGATGATACCTAGCTGATGTTTGCTTGTGCTCAGGGG  500

seq1  GAGCCCCTGGTGTAACTTGCTTTGGGGTGCAGAGGAAGAAGCCACCCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCCTGGTGTAACTTGCTTTGGGGTGCAGAGGAAGAAGCCACCCCAG  550

seq1  GGGTGCAGAAGTCTGATCTGGAGCTTGAGAACTCTATGGGATTTCACCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCAGAAGTCTGATCTGGAGCTTGAGAACTCTATGGGATTTCACCAG  600

seq1  AAGGGCGAGAAGGGGAGCGCGCTCCACGCTCTGGATCAGGAAGCCCCGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCGAGAAGGGGAGCGCGCTCCACGCTCTGGATCAGGAAGCCCCGTG  650

seq1  GCCAGGTGCAGAGGAGGGTGGGGCCTGTGTAACAGGGCAATGCAAAGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGTGCAGAGGAGGGTGGGGCCTGTGTAACAGGGCAATGCAAAGCAT  700

seq1  TTCTTGAGTCTTCCTGCATAATCATCACTCATACCGAGTCTAGTGCTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGAGTCTTCCTGCATAATCATCACTCATACCGAGTCTAGTGCTGAA  750

seq1  CATTCTCAAAGCTTTTCAAGGAACTTCGACCTTCACCAGCCTCTCCTATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCAAAGCTTTTCAAGGAACTTCGACCTTCACCAGCCTCTCCTATG  800

seq1  TTATTGGCCAACTGAGTGACAATTTTATAAACAACGCCAACATATTTAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGGCCAACTGAGTGACAATTTTATAAACAACGCCAACATATTTAAG  850

seq1  TGTTCTCAGTCTTTGCCATGAAGGGAGTGTGATCCTAAGAGAA--GGGGG  898
      |||||||||||||||||||||||||||||||||||||||||||  |||||
seq2  TGTTCTCAGTCTTTGCCATGAAGGGAGTGTGATCCTAAGAGAAAGGGGGG  900

seq1  GGGGGGATG  907
      |||||||||
seq2  GGGGGGATG  909

seq1: chr7_143184797_143185931
seq2: B6Ng01-002K07.g_67_1190 (reverse)

seq1  TCTTCTTATTCTATGAACAGAAAGGATCGCTCTGATTCTGTCT-GTGTCC  49
      ||||||||||  ||||||||||| |||||||| |||| ||||| ||||| 
seq2  TCTTCTTATTTCATGAACAGAAA-GATCGCTC-GATT-TGTCTGGTGTCG  47

seq1  GTTGTGAACTGCAGAAATACACATGCAGTAGTGAAATATGATGTTCACCA  99
      |||| |||||||||||||||| ||||||||||||||||||||| ||| ||
seq2  GTTG-GAACTGCAGAAATACAAATGCAGTAGTGAAATATGATG-TCA-CA  94

seq1  AGTCAGGTCCCCCAGTAAGGACCATATCACTTGTCTGTCTTGGGTTGAGC  149
      ||||| |||||||||||| |||||||||||||||| ||||  || |||||
seq2  AGTCA-GTCCCCCAGTAA-GACCATATCACTTGTC-GTCT--GGGTGAGC  139

seq1  TGGCCCACTGACTGTTAAGACCATCACTGAACCAAAGAAGGACTTGGGGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCACTGACTGTTAAGACCATCACTGAACCAAAGAAGGACTTGGGGA  189

seq1  AAGAATAATAGAAGGTTAGAATGTTGTTTTCAGTCCTAAGGGTCCATGGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAATAGAAGGTTAGAATGTTGTTTTCAGTCCTAAGGGTCCATGGG  239

seq1  TGATAAGTATCTCCAGCAACTAGTCTATAAATGAATAGCCTGAACTAATA  299
      ||||||||||||||||||||||||||||||||||| | ||||||||||||
seq2  TGATAAGTATCTCCAGCAACTAGTCTATAAATGAA-AACCTGAACTAATA  288

seq1  TCTTTGCTCTTCCATTTCCATGCTTTCATCCATAAGACAGAATGGATGTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCTCTTCCATTTCCATGCTTTCATCCATAAGACAGAATGGATGTG  338

seq1  TCTACCCCATAGGACCACCGTGAAGATGGAATTGACTATGCATGGGTCTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCCCATAGGACCACCGTGAAGATGGAATTGACTATGCATGGGTCTT  388

seq1  CATGATCCTGTTGAAGACTACAATCAAGCACTGAACAGAACATGCAGAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATCCTGTTGAAGACTACAATCAAGCACTGAACAGAACATGCAGAGA  438

seq1  GGAGAGTGTGGGAAGCAGGCAGATTTCTAGAGAACCCCTGTCCCAGCTGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGTGTGGGAAGCAGGCAGATTTCTAGAGAACCCCTGTCCCAGCTGC  488

seq1  CATCATCCCAATAGTTTGGAAAACAGCAGCTGGTGTGTACCAGGAGCCTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCCCAATAGTTTGGAAAACAGCAGCTGGTGTGTACCAGGAGCCTT  538

seq1  TCCCTCTGTGTGCCTGCTGACGCTGCTTCTGCTTTCTCCCAGGTGGCCTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTGTGTGCCTGCTGACGCTGCTTCTGCTTTCTCCCAGGTGGCCTG  588

seq1  AGCTGAGAATTGGGTACTGTCATCCACTCTAGAGGTAACTTGGTCTCCAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGAATTGGGTACTGTCATCCACTCTAGAGGTAACTTGGTCTCCAG  638

seq1  ACTTGGCACTCTAGCCTGGGCACTCGTGGGGTAGTCTGGTTTCCAGGCTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGCACTCTAGCCTGGGCACTCGTGGGGTAGTCTGGTTTCCAGGCTG  688

seq1  GGACTCCAATCTTGGACACCAAAGGCCTGATGAGGCCCCAGGTTCTGCAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCCAATCTTGGACACCAAAGGCCTGATGAGGCCCCAGGTTCTGCAG  738

seq1  CCTCTGAGACTTGGTATGGAAGACCCAGTCTCCCTAGTTAGGGGAGACAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGAGACTTGGTATGGAAGACCCAGTCTCCCTAGTTAGGGGAGACAC  788

seq1  AAAGCAGGTGTCTGTGTGTTTGACAGCCAGCTTGGGAATGTGACAGCCTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGGTGTCTGTGTGTTTGACAGCCAGCTTGGGAATGTGACAGCCTG  838

seq1  GTGAGGCAGTGGTGTCTGAGTCCAGGTACAGTCATATATAACTATACTCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGCAGTGGTGTCTGAGTCCAGGTACAGTCATATATAACTATACTCT  888

seq1  TGCATTTGGCAACCTTCACGTTGTAATTTTTCTATGAAAAAGGCCATAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTGGCAACCTTCACGTTGTAATTTTTCTATGAAAAAGGCCATAAA  938

seq1  ACAACAACGGTAATAATAACTCTGCTTGTTCGGCAAAGAAAGGAAGACAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAACGGTAATAATAACTCTGCTTGTTCGGCAAAGAAAGGAAGACAG  988

seq1  TATATTTTTTTATTTGGAGTTTTGTAGTTAAACACCGCCATCTTTATTTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTTTTATTTGGAGTTTTGTAGTTAAACACCGCCATCTTTATTTC  1038

seq1  TCCTGTCACCTAACTTTACTATAACACTGTTCCCTGAGAGATGCCCCATA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCACCTAACTTTACTATAACACTGTTCCCTGAGAGATGCCCCATA  1088

seq1  AACCACCTCTTGCTTCCCGAGCCAGCCATTGAATTC  1135
      ||||||||||||||||||||||||||||||||||||
seq2  AACCACCTCTTGCTTCCCGAGCCAGCCATTGAATTC  1124