BAC Information

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BAC

Clone NameB6Ng01-003E05
Chromosome7 (Build37)
Map Location 102,103,718 - 102,104,905
singlet/doubletsinglet
Overlap geneLOC100040132
Upstream geneEG545982, EG666816
Downstream geneLOC666823, Frda-ps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-003E05.bB6Ng01-003E05.g
ACCDH841032DH841033
length1,1721,197
definitionDH841032|Mus musculus domesticus DNA, BAC clone: B6Ng01-003E05, 5' end.DH841033|Mus musculus domesticus DNA, BAC clone: B6Ng01-003E05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccatgtattgggaagagacaatcttttaattaaaatgaggttg
cttcacaaactgagcacaagactgcctttccctctacagagtgatggttt
caatctaaatatttcagtgagaccaagtgctgatggtatgcctcatgtca
gagataaaataaagcccattcaaagatggccacaaccaactccctgcaac
ctgtgaggatgttagcctgtatgacagaaagactttgcatatgaagactg
attaagtgttttaggacagaaagaggatgctggatttcttgtggggaact
gttgtctgaatatatgttcaagcaaagatgactaagtcagccaaatgaga
gagtaagagaaagcaaaaaggccacatgatgtgatgccatgagcctaaga
cgtgaacagaaagggaatgccttagagcttcttccctctccttccccaag
ccctcagtcacaagaaagtgccaatcatactgaaatctcactttaattct
acacattttcttttgtgctttttatgcatataagtgtaaaaacagcatat
attagccccctttaaggctctaagatcaaggtaatttgctacagtggtaa
cagaatactaatgtaatgtgcttgcatgagagatctagtgataatgaaaa
cagtggatttaataatttgttaattgttcggcaaaagcgaagaaatcaaa
atctaagaacaaagtggaatataagagcctggaacaagttgagaatgagc
attccttccctgtagtgttaactttcatttatagtgcattcaccttccat
actggaagcccagagctacattacaaaaatgattagagaatttccctctt
atgaagttcttcagcaagaggaagattaaagtttggtaaagaatttagct
ttgttattaaagaaaacaggcacatggaggtcagtgatctttctggcagt
agacacagagaagagaacaacggccatatgtttgggatgtaactaaggag
tagctgttgacaagtatgaggcagagtatggccaacagcagactcaaatt
gagcttatgaagcacaaggtttgctgaatttcactgagggctgacatgaa
tgcataagctggatgaggtaatactaaaccggaaaacaactttctcaagg
tgaggaatggctgaatacattt
gaattctgtaggcttcttgtatgttcatgggcatctctttctttagattt
gggaagttttcttcaataattttgttgaagatgtttgctggtcctttgag
ttgaaaatcttcattctcatccactcctattatgcgtaggtttggtcttc
tcattgtgtcctggatttcctggatgttttgagttaggatctttttgcat
tttccattttctttgattgttgtgctgatgttctctatggaatcttctgc
acctgtgattctttcttccatctcttgtattctgttgctgatgctggcat
ctatggttccagatttctttcctagggtttctatctccagcgttgcctca
ctttggtttttctttatttgtctacttccctttttaggtctagtatggtt
ttgttcatttctatcacctgtttggatgtgttttcctgtttttctataag
gacttctacatgtttggttgtgttttcctgtttttctttaaggacttgta
actctttagcagtgttctcctgtatttttttaagtgagttattaaattcc
ttctttatgtcctctaccatcatcatgagaaatgcttttaaatccaggtc
taccttttcaggtgtgttaggatgtcctggactgggcgaagtgggagtgc
tgggttctgatgatggtgagtggtcttggttcctgttagtaggattctta
cgtttacctttcgccatctgacaatctctggagttagttgttatagttgt
ctttgtttagagattgttcctctgctgattttgttaccctctatcagcag
acatgggagactagctctctcctccgagtttcagcggtcagagcagtctc
tgcaggcaagctcttctctttcaggaaggtgcacagataactggtgtttg
gacacctcctggctgagatgaaagccaaaacaggatctttcccagagctg
tgttgcttggccaggaaggtggctggtttctggagccgagaggcgctgcc
tagaagcttctgtactctcatcttgcccaagaatgctggctttgtattcc
acacagtccactgtgcacctgtcctctcgatcctgagcacaaggaattct
cctgtcgggcctgagacaaaccttcggctggggatcctggtcatttcctt
acctcattcagaccagcaaaagtactttcctgcagtaagtgaaactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_102103718_102104905
seq2: B6Ng01-003E05.b_46_1217 (reverse)

seq1  AAATGTATATCAGCCATTCCTCACTTGATGAAAAGTTTGTTCTCCTGTTT  50
      |||||||| ||||||||||||||| |  ||| ||  ||||| ||| | ||
seq2  AAATGTAT-TCAGCCATTCCTCACCT--TGAGAAAGTTGTTTTCC-GGTT  46

seq1  TTGTTATTTATCTTTCATTCAGGCTTATTGCAATTCATGTCAAGCTCTCA  100
      | ||   ||| |  |||| || ||||| ||| ||||||||| ||| ||||
seq2  TAGT--ATTACC--TCATCCA-GCTTA-TGC-ATTCATGTC-AGCCCTCA  88

seq1  GTGAATTTCAGCAAAACCCTTGTGCTTTCAATAGCTC-ATTTGTGTCTGC  149
      ||||| |||||||||  |||||||| ||||  ||||| ||||| ||||||
seq2  GTGAAATTCAGCAAA--CCTTGTGC-TTCATAAGCTCAATTTGAGTCTGC  135

seq1  TGTTGGCCATACTCTGCCTCCATACTTTGTCAACAGCTACTCCTTAGTTA  199
      ||||||||||||||||||| ||||| ||||||||||||||||||||||||
seq2  TGTTGGCCATACTCTGCCT-CATAC-TTGTCAACAGCTACTCCTTAGTTA  183

seq1  CAT-CCAAACATATGGCCGTTGTTCTCTTCTCTGTGTCTACTGCCAGAAA  248
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCAAACATATGGCCGTTGTTCTCTTCTCTGTGTCTACTGCCAGAAA  233

seq1  GAATCACTGACCTCCATGTGCCTGTTTTCTTTAATAAC-AAGCTAAATTT  297
      | |||||||||||||||||||||||||||||||||||| |||||||| ||
seq2  G-ATCACTGACCTCCATGTGCCTGTTTTCTTTAATAACAAAGCTAAA-TT  281

seq1  CTTTACCAAACTTTAATCTTCCTCTTGCTGAAGAACTTCATAAGAGGGAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACCAAACTTTAATCTTCCTCTTGCTGAAGAACTTCATAAGAGGGAA  331

seq1  ATTCTCTAATCATTTTTGTAATGTAGCTCTGGGCTTCCAGTATGGAAGGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTAATCATTTTTGTAATGTAGCTCTGGGCTTCCAGTATGGAAGGT  381

seq1  GAATTGCACTATAAATG-AAGTTAACACTACAGGGAAGGAATGCTCATTC  446
      ||| ||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GAA-TGCACTATAAATGAAAGTTAACACTACAGGGAAGGAATGCTCATTC  430

seq1  TCAACTTGTTCCAGGCTCTTATATTCCACTTTGTTCTTAGATTTTGATTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTTGTTCCAGGCTCTTATATTCCACTTTGTTCTTAGATTTTGATTT  480

seq1  CTTCGCTTTTGCCGAACAATTAACAAATTATTAAATCCACTGTTTTCATT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGCTTTTGCCGAACAATTAACAAATTATTAAATCCACTGTTTTCATT  530

seq1  ATCACTAGATCTCTCATGCAAGCACATTACATTAGTATTCTGTTACCACT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTAGATCTCTCATGCAAGCACATTACATTAGTATTCTGTTACCACT  580

seq1  GTAGCAAATTACCTTGATCTTAGAGCCTTAAAGGGGGCTAATATATGCTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAAATTACCTTGATCTTAGAGCCTTAAAGGGGGCTAATATATGCTG  630

seq1  TTTTTACACTTATATGCATAAAAAGCACAAAAGAAAATGTGTAGAATTAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACACTTATATGCATAAAAAGCACAAAAGAAAATGTGTAGAATTAA  680

seq1  AGTGAGATTTCAGTATGATTGGCACTTTCTTGTGACTGAGGGCTTGGGGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGATTTCAGTATGATTGGCACTTTCTTGTGACTGAGGGCTTGGGGA  730

seq1  AGGAGAGGGAAGAAGCTCTAAGGCATTCCCTTTCTGTTCACGTCTTAGGC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGGGAAGAAGCTCTAAGGCATTCCCTTTCTGTTCACGTCTTAGGC  780

seq1  TCATGGCATCACATCATGTGGCCTTTTTGCTTTCTCTTACTCTCTCATTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGCATCACATCATGTGGCCTTTTTGCTTTCTCTTACTCTCTCATTT  830

seq1  GGCTGACTTAGTCATCTTTGCTTGAACATATATTCAGACAACAGTTCCCC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGACTTAGTCATCTTTGCTTGAACATATATTCAGACAACAGTTCCCC  880

seq1  ACAAGAAATCCAGCATCCTCTTTCTGTCCTAAAACACTTAATCAGTCTTC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAAATCCAGCATCCTCTTTCTGTCCTAAAACACTTAATCAGTCTTC  930

seq1  ATATGCAAAGTCTTTCTGTCATACAGGCTAACATCCTCACAGGTTGCAGG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCAAAGTCTTTCTGTCATACAGGCTAACATCCTCACAGGTTGCAGG  980

seq1  GAGTTGGTTGTGGCCATCTTTGAATGGGCTTTATTTTATCTCTGACATGA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGGTTGTGGCCATCTTTGAATGGGCTTTATTTTATCTCTGACATGA  1030

seq1  GGCATACCATCAGCACTTGGTCTCACTGAAATATTTAGATTGAAACCATC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATACCATCAGCACTTGGTCTCACTGAAATATTTAGATTGAAACCATC  1080

seq1  ACTCTGTAGAGGGAAAGGCAGTCTTGTGCTCAGTTTGTGAAGCAACCTCA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTAGAGGGAAAGGCAGTCTTGTGCTCAGTTTGTGAAGCAACCTCA  1130

seq1  TTTTAATTAAAAGATTGTCTCTTCCCAATACATGGTGAATTC  1188
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTAAAAGATTGTCTCTTCCCAATACATGGTGAATTC  1172