BAC Information

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BAC

Clone NameB6Ng01-004I13
Chromosome7 (Build37)
Map Location 132,939,084 - 133,111,617
singlet/doubletdoublet
Overlap geneD430042O09Rik, Gsg1l
Upstream geneEG545999, LOC670828, 4933440M02Rik, LOC100043014, Jmjd5, Nsmce1, EG244214, Il4ra, Il21r, Gtf3c1
Downstream geneXpo6, Sbk1, LOC100043495, Lat, 2210013K02Rik, Nfatc2ip, Cd19, Rabep2, Atp2a1, Sh2b1, Tufm, Atxn2l, Eif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044, Mapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa, 1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik, Kctd13, A830007L07Rik, Sez6l2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-004I13.bB6Ng01-004I13.g
ACCDH841914DH841915
length749283
definitionDH841914|Mus musculus domesticus DNA, BAC clone: B6Ng01-004I13, 5' end.DH841915|Mus musculus domesticus DNA, BAC clone: B6Ng01-004I13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,939,084 - 132,939,832)(133,111,335 - 133,111,617)
sequence
gaattcagctggtccctgaacactacagggaaaggttcctaaagacttcc
aaagactgaggaccttcccatagaaactgtccccagtgtgctgtaagaga
gttagtgcactccagctggccttggatacctgtaaagactagagctggag
taggcccattgtccttccttctcctctctcctgtcctctctcccctccct
cctgtcctatagccccccttttcctctcccctttttcttcctctcccccc
tcctattgcttctcttctatcagatttcccaacttagttccattctaagg
tgactttcaggcattcagaggcacagttgccttcctagaatggccttata
gcatcactagaaagtcagtttctttctccccaaagcccagggttggctct
caaaaaaaaaaaaaaaaaaaaaaaaaaaaccacagtagcagtctaccaca
ggtctctgccagttcaaaacttctttctttggggctgatgagccgggcta
gctaacaggactaaagggttttgtctccacctattcatgtgcagggaagg
tgtagctaaggggaatctgagggataagaaggaagctaggcaggcaggaa
tagctgctactttccagcttctgttctacagaaaacaaccttgggaagta
gagggaacaccagtgaagtgggacgtgagtggccagagacacctgctgct
aggtgacctctgacagttctagcaaatgctggtgggggtgggggtgggg
cactccaagtgccccattacatcccacagggcagcctctgaggatgtcca
ctgggaccttgagtcaaagcctataagacatcctgacttgttaaagggac
ttagatcattgtgactttgagcagctcactcaccatctctgggcctcggt
agaaagactacaggatgcagtggggctggcagttactcatctgatcacag
gacgtgcctgacagaagcaacttaggagaatggttttagaagcccttagt
caccatggcggggatggtatggtggggatgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_132939084_132939832
seq2: B6Ng01-004I13.b_48_796

seq1  GAATTCAGCTGGTCCCTGAACACTACAGGGAAAGGTTCCTAAAGACTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTGGTCCCTGAACACTACAGGGAAAGGTTCCTAAAGACTTCC  50

seq1  AAAGACTGAGGACCTTCCCATAGAAACTGTCCCCAGTGTGCTGTAAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACTGAGGACCTTCCCATAGAAACTGTCCCCAGTGTGCTGTAAGAGA  100

seq1  GTTAGTGCACTCCAGCTGGCCTTGGATACCTGTAAAGACTAGAGCTGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTGCACTCCAGCTGGCCTTGGATACCTGTAAAGACTAGAGCTGGAG  150

seq1  TAGGCCCATTGTCCTTCCTTCTCCTCTCTCCTGTCCTCTCTCCCCTCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCCATTGTCCTTCCTTCTCCTCTCTCCTGTCCTCTCTCCCCTCCCT  200

seq1  CCTGTCCTATAGCCCCCCTTTTCCTCTCCCCTTTTTCTTCCTCTCCCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCCTATAGCCCCCCTTTTCCTCTCCCCTTTTTCTTCCTCTCCCCCC  250

seq1  TCCTATTGCTTCTCTTCTATCAGATTTCCCAACTTAGTTCCATTCTAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATTGCTTCTCTTCTATCAGATTTCCCAACTTAGTTCCATTCTAAGG  300

seq1  TGACTTTCAGGCATTCAGAGGCACAGTTGCCTTCCTAGAATGGCCTTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTCAGGCATTCAGAGGCACAGTTGCCTTCCTAGAATGGCCTTATA  350

seq1  GCATCACTAGAAAGTCAGTTTCTTTCTCCCCAAAGCCCAGGGTTGGCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCACTAGAAAGTCAGTTTCTTTCTCCCCAAAGCCCAGGGTTGGCTCT  400

seq1  CAAAAAAAAAAAAAAAAAAAAAAAAAAAACCACAGTAGCAGTCTACCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAAAAAAAAAAAAAAAAAAAAAAACCACAGTAGCAGTCTACCACA  450

seq1  GGTCTCTGCCAGTTCAGAACTTCTTTCTTTGGGGCTGATGAGCCGGGCTA  500
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GGTCTCTGCCAGTTCAAAACTTCTTTCTTTGGGGCTGATGAGCCGGGCTA  500

seq1  GCTAACAGGACTAAAGGGTTTTGTCTCCACCTATTCATGTGCAGGGAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACAGGACTAAAGGGTTTTGTCTCCACCTATTCATGTGCAGGGAAGG  550

seq1  TGTAGCTAAGGGGAATCTGAGGGATAAGAAGGAAGCTAGGCAGGCAGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTAAGGGGAATCTGAGGGATAAGAAGGAAGCTAGGCAGGCAGGAA  600

seq1  TAGCTGCTACTTTCCAGCTTCTGTTCTACAGAAAACAACCTTGGGAAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGCTACTTTCCAGCTTCTGTTCTACAGAAAACAACCTTGGGAAGTA  650

seq1  GAGGGAACACCAGTGAAGTGGGACGTGAGTGGCCAGAGACACCTGCTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAACACCAGTGAAGTGGGACGTGAGTGGCCAGAGACACCTGCTGCT  700

seq1  AGGTGACCTCTGACAGTTCTAGCAAATGCTGGTGGGGGTGGGGGTGGGG  749
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGACCTCTGACAGTTCTAGCAAATGCTGGTGGGGGTGGGGGTGGGG  749

seq1: chr7_133111335_133111617
seq2: B6Ng01-004I13.g_71_353 (reverse)

seq1  CCCCATCCCCACCATACCATCCCCGCCATGGTGACTAAGGGCTTCTAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATCCCCACCATACCATCCCCGCCATGGTGACTAAGGGCTTCTAAAA  50

seq1  CCATTCTCCTAAGTTGCTTCTGTCAGGCACGTCCTGTGATCAGATGAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTCCTAAGTTGCTTCTGTCAGGCACGTCCTGTGATCAGATGAGTA  100

seq1  ACTGCCAGCCCCACTGCATCCTGTAGTCTTTCTACCGAGGCCCAGAGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCAGCCCCACTGCATCCTGTAGTCTTTCTACCGAGGCCCAGAGATG  150

seq1  GTGAGTGAGCTGCTCAAAGTCACAATGATCTAAGTCCCTTTAACAAGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTGAGCTGCTCAAAGTCACAATGATCTAAGTCCCTTTAACAAGTCA  200

seq1  GGATGTCTTATAGGCTTTGACTCAAGGTCCCAGTGGACATCCTCAGAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTCTTATAGGCTTTGACTCAAGGTCCCAGTGGACATCCTCAGAGGC  250

seq1  TGCCCTGTGGGATGTAATGGGGCACTTGGAGTG  283
      |||||||||||||||||||||||||||||||||
seq2  TGCCCTGTGGGATGTAATGGGGCACTTGGAGTG  283