BAC Information

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BAC

Clone NameB6Ng01-005B04
Chromosome7 (Build37)
Map Location 98,301,971 - 98,426,820
singlet/doubletdoublet
Overlap geneDlg2
Upstream genePicalm, Ccdc83, Sytl2, Ccdc89, Crebzf, Tmem126a, Tmem126b, B230218P12Rik, LOC666689, LOC621816, LOC100039943
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005B04.bB6Ng01-005B04.g
ACCDH842311DH842312
length1,032505
definitionDH842311|Mus musculus domesticus DNA, BAC clone: B6Ng01-005B04, 5' end.DH842312|Mus musculus domesticus DNA, BAC clone: B6Ng01-005B04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,301,971 - 98,302,865)(98,426,310 - 98,426,820)
sequence
gaattcatcatttttaatagctgagtggtactccattgtgtaaatgtacc
acattttctgtatccattcccctgttgaaggacatctgggttctttccag
tttctggctagtatcaaaaggctgttatgaatatagtagagcatgtgtcc
ttcttacatgttggagcatcttctgggtatatgcccaggggtcttatagc
tgggtcctcaggtagtactatgcccaattttctgaggaactgccaaattg
atttccagagtggttgtaccagctcccaatcccactagcaatggaggagt
gttcctctttctccacctcctcaccagcatctgctgtcacttgagttttt
gatctttgccattatgagtggtataaggtggaatctcagggttgttttga
tttgcatttccctgatgactaaaatgttgaacatttctttaggtgattct
tagccattacatattcctcagttgagaattctttgtttagctctgtaacc
catttttaatagggttatttggttctctgaagtctaacttcttgagttct
ttgtatatattggatattagccctctatcagatgtagggttggtcaaaag
acttttttccaatctgttgtttgctgttttgtcctatctccccattcttt
ctttacaggacaaataattcaatttctacttgactttggaaaattccccc
accccttttttttaaacttgagtttatattttattgtatgccttgaattt
gatgctgaagcctaatattttaaggcattatatactaagccaaactatgc
aggctggcaaaaaacaaaaaaggcaaaacatgatctgttggtttgtggtt
ttctcatacaggcatccattgtgattcatcatcaagtgagtcatcaggat
gaatttggtcagtcaacctagcagtaaagagatgcatgaatggctttcga
gaaaatatgtttgaaagaatgcagtgatgggactaccattacatagctga
aaagtcagcacatatatgggaaatatgttgtt
cttcccatttttgaaaatctatgaactgttttaatgtttttaaaccttct
catcacatatgtgtgattatgaacactacacttaagagtcatccatttgt
ccactcaccccattgctaagtaaaattgatttccagatcctagttcaaaa
ctgaaaattcatttattgtttattaagtacctcacagttattgctaattt
cttaaagtggaatccaagagaaattaaatacaggtaatcatatcttcaaa
ttgtctaaaactgaaatatcacaggcatcactatgaagatcaaggaggga
tatatgggaggttttggagaaatatgaaacataagaaagaaatcataaca
tcttataatctcaaaaataaatggaaaaataggataggttcttctttgaa
attacagtttaatttaaaataaaatacatataaagtttgcaagaccaaca
ggcctctcttcaggggaacaccagggccaagaagtgggagtgggtgggta
gggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_98301971_98302865
seq2: B6Ng01-005B04.b_183_1075

seq1  AGCATGTGTCCTTCTTACATGTTGGAGCATCTTCTGGGTATATGCCCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGTGTCCTTCTTACATGTTGGAGCATCTTCTGGGTATATGCCCAGG  50

seq1  GGTCTTATAGCTGGGTCCTCAGGTAGTACTATGCCCAATTTTCTGAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTATAGCTGGGTCCTCAGGTAGTACTATGCCCAATTTTCTGAGGAA  100

seq1  CTGCCAAATTGATTTCCAGAGTGGTTGTACCAGCTCCCAATCCCACTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAAATTGATTTCCAGAGTGGTTGTACCAGCTCCCAATCCCACTAGC  150

seq1  AATGGAGGAGTGTTCCTCTTTCTCCACCTCCTCACCAGCATCTGCTGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGGAGTGTTCCTCTTTCTCCACCTCCTCACCAGCATCTGCTGTCA  200

seq1  CTTGAGTTTTTGATCTTTGCCATTATGAGTGGTATAAGGTGGAATCTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGTTTTTGATCTTTGCCATTATGAGTGGTATAAGGTGGAATCTCAG  250

seq1  GGTTGTTTTGATTTGCATTTCCCTGATGACTAAAATGTTGAACATTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTTTTGATTTGCATTTCCCTGATGACTAAAATGTTGAACATTTCTT  300

seq1  TAGGTGATTCTTAGCCATTACATATTCCTCAGTTGAGAATTCTTTGTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGATTCTTAGCCATTACATATTCCTCAGTTGAGAATTCTTTGTTTA  350

seq1  GCTCTGTAACCCATTTTTAATAGGGTTATTTGGTTCTCTGAAGTCTAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGTAACCCATTTTTAATAGGGTTATTTGGTTCTCTGAAGTCTAACT  400

seq1  TCTTGAGTTCTTTGTATATATTGGATATTAGCCCTCTATCAGATGTAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGTTCTTTGTATATATTGGATATTAGCCCTCTATCAGATGTAGGG  450

seq1  TTGGTCAAAAGACTTTTTTCCAATCTGTTGTTTGCTGTTTTGTCCTATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCAAAAGACTTTTTTCCAATCTGTTGTTTGCTGTTTTGTCCTATCT  500

seq1  CCCCATTCTTTCTTTACAGGACAAATAATTCAATTTCTACTTGACTTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATTCTTTCTTTACAGGACAAATAATTCAATTTCTACTTGACTTTGG  550

seq1  AAAATTCCCCCACCCCTTTTTTTTAAACTTGAGTTTATATTTTATTGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCCCCCACCCCTTTTTTTTAAACTTGAGTTTATATTTTATTGTAT  600

seq1  GCCTTGAATTTGATGCTGAAGCCTAATATTTTAAGGCATTATATACTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGAATTTGATGCTGAAGCCTAATATTTTAAGGCATTATATACTAAG  650

seq1  CCAAACTATGCAGGCTGGCAAAAAACAAAAAAGGCAAAACATGATCTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTATGCAGGCTGGCAAAAAACAAAAAAGGCAAAACATGATCTGTT  700

seq1  GGTTTGTGGTTTTCTACATACAGGCATCCATTGTGATTCATCATCAAGTG  750
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GGTTTGTGGTTTTCT-CATACAGGCATCCATTGTGATTCATCATCAAGTG  749

seq1  AGTCATCA-GATGAATTT-GTCAGTCAACCTAGCAGTAAAGAGAATGCAT  798
      |||||||| ||||||||| |||||||||||||||||||||||| ||||||
seq2  AGTCATCAGGATGAATTTGGTCAGTCAACCTAGCAGTAAAGAG-ATGCAT  798

seq1  GAATGGCTTTCGAG-AAATATGTTTGAAAGAATGCAGTGAATGGGACTAC  847
      |||||||||||||| |||||||||||||||||||||||| ||||||||||
seq2  GAATGGCTTTCGAGAAAATATGTTTGAAAGAATGCAGTG-ATGGGACTAC  847

seq1  CATTACAATAGCTGAAAAGGCCAGCACATATATGGGAAATATGTTGTT  895
      |||||| ||||||||||| | |||||||||||||||||||||||||||
seq2  CATTAC-ATAGCTGAAAA-GTCAGCACATATATGGGAAATATGTTGTT  893

seq1: chr7_98426310_98426820
seq2: B6Ng01-005B04.g_68_578 (reverse)

seq1  TCCCCTACCCACCCACTCCCACTTCTTGGCCCTGGTGTTCCCCTGAAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTACCCACCCACTCCCACTTCTTGGCCCTGGTGTTCCCCTGAAGAG  50

seq1  AGGCCTGTTGGTCTTGCAAACTTTATATGTATTTTATTTTAAATTAAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGTTGGTCTTGCAAACTTTATATGTATTTTATTTTAAATTAAACT  100

seq1  GTAATTTCAAAGAAGAACCTATCCTATTTTTCCATTTATTTTTGAGATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTCAAAGAAGAACCTATCCTATTTTTCCATTTATTTTTGAGATTA  150

seq1  TAAGATGTTATGATTTCTTTCTTATGTTTCATATTTCTCCAAAACCTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATGTTATGATTTCTTTCTTATGTTTCATATTTCTCCAAAACCTCCC  200

seq1  ATATATCCCTCCTTGATCTTCATAGTGATGCCTGTGATATTTCAGTTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCCCTCCTTGATCTTCATAGTGATGCCTGTGATATTTCAGTTTTA  250

seq1  GACAATTTGAAGATATGATTACCTGTATTTAATTTCTCTTGGATTCCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATTTGAAGATATGATTACCTGTATTTAATTTCTCTTGGATTCCACT  300

seq1  TTAAGAAATTAGCAATAACTGTGAGGTACTTAATAAACAATAAATGAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAATTAGCAATAACTGTGAGGTACTTAATAAACAATAAATGAATT  350

seq1  TTCAGTTTTGAACTAGGATCTGGAAATCAATTTTACTTAGCAATGGGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTTTGAACTAGGATCTGGAAATCAATTTTACTTAGCAATGGGGTG  400

seq1  AGTGGACAAATGGATGACTCTTAAGTGTAGTGTTCATAATCACACATATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGACAAATGGATGACTCTTAAGTGTAGTGTTCATAATCACACATATG  450

seq1  TGATGAGAAGGTTTAAAAACATTAAAACAGTTCATAGATTTTCAAAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAGAAGGTTTAAAAACATTAAAACAGTTCATAGATTTTCAAAAATG  500

seq1  GGAAGGAATTC  511
      |||||||||||
seq2  GGAAGGAATTC  511