BAC Information

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BAC

Clone NameB6Ng01-005D14
Chromosome7 (Build37)
Map Location 135,461,457 - 135,645,005
singlet/doubletdoublet
Overlap geneEG628781, Rgs10, LOC100043643, Tial1
Upstream geneItgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72, LOC436010, EG668675, Itgam, Itgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158
Downstream geneBag3, EG639030, Inpp5f, LOC100043651, 1110007A13Rik, Sec23ip, LOC210714, LOC100043144, Ppapdc1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005D14.bB6Ng01-005D14.g
ACCDH842417DH842418
length953617
definitionDH842417|Mus musculus domesticus DNA, BAC clone: B6Ng01-005D14, 5' end.DH842418|Mus musculus domesticus DNA, BAC clone: B6Ng01-005D14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(135,461,457 - 135,462,409)(135,644,390 - 135,645,005)
sequence
gaattcttccagggcctctgttttcttgcaagacataccagagtccagac
accagaaaatgaagagatggggggattgcctcactgcctagctagcccct
tccccttcagtcatgcttgggccttgctttgcctgtgaagctgcctgtgt
ctgaggaagtcttctctgtagctctccctggggaccaagatgctatccac
agttggccactacagtcctaattagtcttgaaccagtgctgctggctaac
tctgttgagctaagttcctgtggcttgggacacagactggacactcaggg
gacctgtaactgatggacaacttggatcagacaccaggtgcatgtcacac
agcatcctctacttctgcatattcttggcctatgtagtggctggttttat
tgttaacttgacacaagatggggttatcacagagaaaggagcctcccttg
aggaaatgcctccatgagatccagctgtaaggcattttctcaattagaga
tcaagagtgggaggtgtcatccctgagctggtagtcctgggtcctataag
agagcagactgagcaagccaggggaagcaaaccagtaagtaacatgcccc
catggcctctgcatcagcttcctgcttcctgacctgcttgagttccagtc
ctgacatcctttggtaatgaacagcagtgtggaaatgtaaactgaataaa
ccctttcctccccaacttacttttttggttatgatgtttgtacaggaata
gaaaccctgactaagacagcctaccaggattctcaactgtcctcagagcc
accacccaaaaggtacaagaggtcaccacctatatagtcagttaccagat
tgcctgcactgtgatgaaatcgtgggtttcattgagattgtgttactttc
caaacacaaagtcggggcattttcttgccctcctggtatcctccagccat
gcc
gaattccaggacagccagggctatacagagaaaccctgtctgggaaaaac
aaaaacaaaaacaaaaaacaaacaaacaaacaaacaaaacaagaaggtgg
ggtcagatgttggaagaaatgaagctttaacacaatgcttgctaagaagg
ctggctcagaagatacaaaagttttcctttcttgacacaggaattgatgc
aagtatttccacatggtcttcagaggggaatacatttagaaccttgcttg
atccccaccccctcctgcccccaggctcatgatttgctctctcattcagg
cctgtcccgggctggttcttcttgctggtttgtttagctgggtttttttt
ggtttttggtttttttttttgtttttttttttttttgttttttgtttttt
ttgtaggccaggctcccccgacaactctctatgcagctgagtctggtctc
gaacttctaatcctttttaacctcacctctcaagtgttgggactacaggt
atgtgcccccatgcctgcctggtccttgtgataagaacaaccatgcaaaa
tccttcagaatgccagcagcagcacactgtcccctgccagcaaaatatcc
cccaacagctcctacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_135461457_135462409
seq2: B6Ng01-005D14.b_44_996

seq1  GAATTCTTCCAGGGCCTCTGTTTTCTTGGAAGACATACCAGAGTCCAGAC  50
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GAATTCTTCCAGGGCCTCTGTTTTCTTGCAAGACATACCAGAGTCCAGAC  50

seq1  ACCAGAAAATGAAGAGATGGGGGGATTGCCTCACTGCCTAGCTAGCCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAAAATGAAGAGATGGGGGGATTGCCTCACTGCCTAGCTAGCCCCT  100

seq1  TCCCCTTCAGTCATGCTTGGGCCTTGCTTTGCCTGTGAAGCTGCCTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTCAGTCATGCTTGGGCCTTGCTTTGCCTGTGAAGCTGCCTGTGT  150

seq1  CTGAGGAAGTCTTCTCTGTAGCTCTCCCTGGGGACCAAGATGCTATCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGAAGTCTTCTCTGTAGCTCTCCCTGGGGACCAAGATGCTATCCAC  200

seq1  AGTTGGCCACTACAGTCCTAATTAGTCTTGAACCAGTGCTGCTGGCTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGCCACTACAGTCCTAATTAGTCTTGAACCAGTGCTGCTGGCTAAC  250

seq1  TCTGTTGAGCTAAGTTCCTGTGGCTTGGGACACAGACTGGACACTCAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGAGCTAAGTTCCTGTGGCTTGGGACACAGACTGGACACTCAGGG  300

seq1  GACCTGTAACTGATGGACAACTTGGATCAGACACCAGGTGCATGTCACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGTAACTGATGGACAACTTGGATCAGACACCAGGTGCATGTCACAC  350

seq1  AGCATCCTCTACTTCTGCATATTCTTGGCCTATGTAGTGGCTGGTTTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCCTCTACTTCTGCATATTCTTGGCCTATGTAGTGGCTGGTTTTAT  400

seq1  TGTTAACTTGACACAAGATGGGGTTATCACAGAGAAAGGAGCCTCCCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAACTTGACACAAGATGGGGTTATCACAGAGAAAGGAGCCTCCCTTG  450

seq1  AGGAAATGCCTCCATGAGATCCAGCTGTAAGGCATTTTCTCAATTAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATGCCTCCATGAGATCCAGCTGTAAGGCATTTTCTCAATTAGAGA  500

seq1  TCAAGAGTGGGAGGTGTCATCCCTGAGCTGGTAGTCCTGGGTCCTATAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAGTGGGAGGTGTCATCCCTGAGCTGGTAGTCCTGGGTCCTATAAG  550

seq1  AGAGCAGACTGAGCAAGCCAGGGGAAGCAAACCAGTAAGTAACATGCCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGACTGAGCAAGCCAGGGGAAGCAAACCAGTAAGTAACATGCCCC  600

seq1  CATGGCCTCTGCATCAGC-TCCTGCTTCCTGACCTGCTTGAGTTCCAGTC  649
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CATGGCCTCTGCATCAGCTTCCTGCTTCCTGACCTGCTTGAGTTCCAGTC  650

seq1  CTGACATCCTTTGGTAATGAACAGCAGTGTGGAAATGTAAACTGAATAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATCCTTTGGTAATGAACAGCAGTGTGGAAATGTAAACTGAATAAA  700

seq1  CCCTTTCCTCCCCAACTTAC-TTTTTGGTTATGATGTTTGTACAGGAATA  748
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CCCTTTCCTCCCCAACTTACTTTTTTGGTTATGATGTTTGTACAGGAATA  750

seq1  GAAACCCTGACTAAGACAGCCTACCAGGATTCTCAACTGTCCTCAGAGCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCTGACTAAGACAGCCTACCAGGATTCTCAACTGTCCTCAGAGCC  800

seq1  ACCACCCAAAAGGTACAAGAGGTCACCACCCAGAGAGTCAGTTACCAGAT  848
      |||||||||||||||||||||||||||||| | | |||||||||||||||
seq2  ACCACCCAAAAGGTACAAGAGGTCACCACCTATATAGTCAGTTACCAGAT  850

seq1  TGCCTGCACTGTGATGGAATCGTGGGTTTCATTGAGATTGTTGTTACTTT  898
      |||||||||||||||| ||||||||||||||||||||||| |||||||||
seq2  TGCCTGCACTGTGATGAAATCGTGGGTTTCATTGAGATTG-TGTTACTTT  899

seq1  -CAAACACAGAGTCGGGGCATTTCCTTTGCCCCTCCT-GTATCCTCCAAG  946
       |||||||| ||||||||||||| |||   ||||||| ||||||||| ||
seq2  CCAAACACAAAGTCGGGGCATTTTCTT--GCCCTCCTGGTATCCTCC-AG  946

seq1  CCATGCC  953
      |||||||
seq2  CCATGCC  953

seq1: chr7_135644390_135645005
seq2: B6Ng01-005D14.g_72_688 (reverse)

seq1  ATGTAGGAGCTGTTGGGGGAT-CTTTGCTGGCAGGGGACAGTGTGCTGCT  49
      |||||||||||||||||||||  |||||||||||||||||||||||||||
seq2  ATGTAGGAGCTGTTGGGGGATATTTTGCTGGCAGGGGACAGTGTGCTGCT  50

seq1  GCTGGCATTCTGAAGGATTTTGCATGGTTGTTCTTATCACAAGGACCAGG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCATTCTGAAGGATTTTGCATGGTTGTTCTTATCACAAGGACCAGG  100

seq1  CAGGCATGGGGGCACATACCTGTAGTCCCAACACTTGAGAGGTGAGGTTA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATGGGGGCACATACCTGTAGTCCCAACACTTGAGAGGTGAGGTTA  150

seq1  AAAAGGATTAGAAGTTCGAGACCAGACTCAGCTGCATAGAGAGTTGTCGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGATTAGAAGTTCGAGACCAGACTCAGCTGCATAGAGAGTTGTCGG  200

seq1  GGGAGCCTGGCCTACAAAAAAAACAAAAAACAAAAAAAAAAAAAAACAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCCTGGCCTACAAAAAAAACAAAAAACAAAAAAAAAAAAAAACAAA  250

seq1  AAAAAAAACCAAAAACCAAAAAAAACCCAGCTAAACAAACCAGCAAGAAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAACCAAAAACCAAAAAAAACCCAGCTAAACAAACCAGCAAGAAG  300

seq1  AACCAGCCCGGGACAGGCCTGAATGAGAGAGCAAATCATGAGCCTGGGGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGCCCGGGACAGGCCTGAATGAGAGAGCAAATCATGAGCCTGGGGG  350

seq1  CAGGAGGGGGTGGGGATCAAGCAAGGTTCTAAATGTATTCCCCTCTGAAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGGGGTGGGGATCAAGCAAGGTTCTAAATGTATTCCCCTCTGAAG  400

seq1  ACCATGTGGAAATACTTGCATCAATTCCTGTGTCAAGAAAGGAAAACTTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTGGAAATACTTGCATCAATTCCTGTGTCAAGAAAGGAAAACTTT  450

seq1  TGTATCTTCTGAGCCAGCCTTCTTAGCAAGCATTGTGTTAAAGCTTCATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCTTCTGAGCCAGCCTTCTTAGCAAGCATTGTGTTAAAGCTTCATT  500

seq1  TCTTCCAACATCTGACCCCACCTTCTTGTTTTGTTTGTTTGTTTGTTTGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCAACATCTGACCCCACCTTCTTGTTTTGTTTGTTTGTTTGTTTGT  550

seq1  TTTTTGTTTTTGTTTTTGTTTTTCCCAGACAGGGTTTCTCTGTATAGCCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTTTGTTTTTGTTTTTCCCAGACAGGGTTTCTCTGTATAGCCC  600

seq1  TGGCTGTCCTGGAATTC  616
      |||||||||||||||||
seq2  TGGCTGTCCTGGAATTC  617