BAC Information

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BAC

Clone NameB6Ng01-005G15
Chromosome7 (Build37)
Map Location 47,513,678 - 47,624,331
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100038914, EG668531, EG628058, EG668618, EG330513, EG434168, 9430025M13Rik, LOC100038985, 3000002G13Rik, EG215208, LOC100039133, LOC100039050, EG668540, 4930558N11Rik, EG628161
Downstream geneLOC100039094, 2900093B09Rik, 4930433I11Rik, EG233164, LOC668555, EG627987, LOC100039269, LOC545955, EG628304, LOC668561, EG434172, LOC100039221, LOC668565
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005G15.bB6Ng01-005G15.g
ACCDH842557DH842558
length1,019807
definitionDH842557|Mus musculus domesticus DNA, BAC clone: B6Ng01-005G15, 5' end.DH842558|Mus musculus domesticus DNA, BAC clone: B6Ng01-005G15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(47,623,304 - 47,624,331)(47,513,678 - 47,514,481)
sequence
gaattcaaattaatttatgctttttttccttcctttttttttctacatcc
atctttctgagcgttgagaaacccttgactttcctaagtctgggattctt
tttttacgaacgagttaatatgtgtgagaagttaagagtcattcatgggt
atgggtagcccagtgagagccacttgttcctgttcctacaggagtcttca
ggtctcatagtcattgtcatcttgtatttcttatgaactcagaggaaatc
tctttctttgttctccatgcaaaagagtttgagaagctgctgggcttcct
taaaagagattaataaatgggtacctgaaccagtcaggaaaggaagggag
tgtggaaacttctgtcctgagagtcaactgcttgtcttggacagaacctt
gcttcagctgcacagaccctgaattacagttgtagttatacagtgagata
gatccatcaagactgaacaagccatgtctcttgggaccttgctttccttg
tcagtacagcaggttggatgatgtcagaggtcttaaattatcatgcttca
aagctggccacagtcttaaccagtttttccatgtatatatgacatggaag
catctcttttagctctgtgcattcctgactagctgatgccagggtctggg
agctggctagcattcttgctcactctgtcagcagcgaacttctctgtggc
taaagaccagatagtagatgtagtcttgcttttattcctgtatagtttcc
atcctaaagtgacaaattcctcagacaagctgtaattcccatgtgccttt
ctgtcaggcatgctttacttaggtggttaccagggtgtgcaattaggatc
cataaacagctaaatgaagctgcatgaaacgtctatgaaactaccgactg
gctaagcatgctccaatttttctttcttctttctctttctttcttttaat
atatatctcctcttggccaggattctgcaaatgatcctgcttagagaagg
gctggaaatgcaggtcaat
gaattcaaagcccatggtgggatttattaaacatttgtacaaattgtctt
gctgaggaagctgtgcctcccctggggcttgttcagaatggctagcaaag
cggtaatggccaagtcatccgacgcagctgtggctgaacagcacacagca
ggaaagccagcaggtcagcaatgaccttctggctgggcaagggccaaggt
attcagttcccagaactttgcataggtcacttgtatcacaagtttgggcg
agtttccaaaaccacagcctactttggaggttgggatggaggccaggttc
atgtgcatcgtctatcaagacaaagttgtaaaacaagtctgctggcttca
tactaggataggaagggagagtgcaaaaaccagtggcaggccccaaagga
tcgtgaagaattgagcaattaggagcacatgaatggacgcatttgcaatg
actgtaataattattccttgaatttataaaacttacataactttgcattt
catacatattacctcgttaattctcattgtttaataatttaaaatggggt
ttctgtgcatgtaagttttcatttgaggcctcataatcactctgggcaat
tttccacaagcccactgaggccttggcagagacatttataaagatttatc
caatccatcaagccagaaaagagcacacagaagaaaattaactcttttca
tccatcccaccacccaacatcaggagtgactccactctcaagtgattctg
gaaggctttgcttgttctcctccttcccagctctccagctgtggtgttgg
gagtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_47623304_47624331
seq2: B6Ng01-005G15.b_44_1062 (reverse)

seq1  ATTGACCTGCATTT-CAGCCCTTTCTCTAAGCAGGATCAATCTGCAGATT  49
      |||||||||||||| |||||| |||||||||||||||| || |||||| |
seq2  ATTGACCTGCATTTCCAGCCC-TTCTCTAAGCAGGATC-ATTTGCAGAAT  48

seq1  CCTGGCCAAGAAGAGATATATTATTTAAAAAGAAAAGAAAAGAGAAAGAA  99
      ||||||||||| |||||||| ||||  ||||||||   |||||||||| |
seq2  CCTGGCCAAGAGGAGATATA-TATT--AAAAGAAA--GAAAGAGAAAG-A  92

seq1  AGAAAGAAAAAAATTGGAGCATGCTTAGCCAGTCGGTAGTTTCATGGACG  149
      ||||||  ||||||||||||||||||||||||||||||||||||| ||||
seq2  AGAAAG--AAAAATTGGAGCATGCTTAGCCAGTCGGTAGTTTCATAGACG  140

seq1  TTTCATGCAGCTTCATTTAGCTGTTTATGGATCCTAATTGCACACCCTGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGCAGCTTCATTTAGCTGTTTATGGATCCTAATTGCACACCCTGG  190

seq1  TTACCACCTAAGTAAAGCATGCCTGACAGAAAGGCACATGGGAATTACAG  249
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCACCTAAGTAAAGCATGCCTGACAGAAAGGCACATGGGAATTACAG  240

seq1  CTTGTCTGAGGAATTTGTCACTTTAGGATGGAAACTATACAGGAATAAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTGAGGAATTTGTCACTTTAGGATGGAAACTATACAGGAATAAAA  290

seq1  GCAAGACTACATCTACTATCTGGTCTTTAGCCACAGAGAAGTTCGCTGCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGACTACATCTACTATCTGGTCTTTAGCCACAGAGAAGTTCGCTGCT  340

seq1  GACAGAGTGAGCAAGAATGCTAGCCAGCTCCCAGACCCTGGCATCAGCTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGTGAGCAAGAATGCTAGCCAGCTCCCAGACCCTGGCATCAGCTA  390

seq1  GTCAGGAATGCACAGAGCTAAAAGAGATGCTTCCATGTCATATATACATG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGAATGCACAGAGCTAAAAGAGATGCTTCCATGTCATATATACATG  440

seq1  GAAAAACTGGTTAAGACTGTGGCCAGCTTTGAAGCATGATAATTTAAGAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACTGGTTAAGACTGTGGCCAGCTTTGAAGCATGATAATTTAAGAC  490

seq1  CTCTGACATCATCCAACCTGCTGTACTGACAAGGAAAGCAAGGTCCCAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGACATCATCCAACCTGCTGTACTGACAAGGAAAGCAAGGTCCCAAG  540

seq1  AGACATGGCTTGTTCAGTCTTGATGGATCTATCTCACTGTATAACTACAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGGCTTGTTCAGTCTTGATGGATCTATCTCACTGTATAACTACAA  590

seq1  CTGTAATTCAGGGTCTGTGCAGCTGAAGCAAGGTTCTGTCCAAGACAAGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAATTCAGGGTCTGTGCAGCTGAAGCAAGGTTCTGTCCAAGACAAGC  640

seq1  AGTTGACTCTCAGGACAGAAGTTTCCACACTCCCTTCCTTTCCTGACTGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGACTCTCAGGACAGAAGTTTCCACACTCCCTTCCTTTCCTGACTGG  690

seq1  TTCAGGTACCCATTTATTAATCTCTTTTAAGGAAGCCCAGCAGCTTCTCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGTACCCATTTATTAATCTCTTTTAAGGAAGCCCAGCAGCTTCTCA  740

seq1  AACTCTTTTGCATGGAGAACAAAGAAAGAGATTTCCTCTGAGTTCATAAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTTTGCATGGAGAACAAAGAAAGAGATTTCCTCTGAGTTCATAAG  790

seq1  AAATACAAGATGACAATGACTATGAGACCTGAAGACTCCTGTAGGAACAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAAGATGACAATGACTATGAGACCTGAAGACTCCTGTAGGAACAG  840

seq1  GAACAAGTGGCTCTCACTGGGCTACCCATACCCATGAATGACTCTTAACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAGTGGCTCTCACTGGGCTACCCATACCCATGAATGACTCTTAACT  890

seq1  TCTCACACATATTAACTCGTTCGTAAAAAAAGAATCCCAGACTTAGGAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACACATATTAACTCGTTCGTAAAAAAAGAATCCCAGACTTAGGAAA  940

seq1  GTCAAGGGTTTCTCAACGCTCAGAAAGATGGATGTAGAAAAAAAAAGGAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGGGTTTCTCAACGCTCAGAAAGATGGATGTAGAAAAAAAAAGGAA  990

seq1  GGAAAAAAAGCATAAATTAATTTGAATTC  1028
      |||||||||||||||||||||||||||||
seq2  GGAAAAAAAGCATAAATTAATTTGAATTC  1019

seq1: chr7_47513678_47514481
seq2: B6Ng01-005G15.g_68_874

seq1  GAATTCAAAGCCCATGGTGGGATTTATTAAACATTTGTACAAATTGTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGCCCATGGTGGGATTTATTAAACATTTGTACAAATTGTCTT  50

seq1  GCTGAGGAAGCTGTGCCTCCCCTGGGGCTTGTTCAGAATGGCTAGCAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGAAGCTGTGCCTCCCCTGGGGCTTGTTCAGAATGGCTAGCAAAG  100

seq1  CGGTAATGGCCAAGTCATCCGACGCAGCTGTGGCTGAACAGCACACAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTAATGGCCAAGTCATCCGACGCAGCTGTGGCTGAACAGCACACAGCA  150

seq1  GGAAAGCCAGCAGGTCAGCAATGACCTTCTGGCTGGGCAAGGGCCAAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGCCAGCAGGTCAGCAATGACCTTCTGGCTGGGCAAGGGCCAAGGT  200

seq1  ATTCAGTTCCCAGAACTTTGCATAGGTCACTTGTATCACAAGTTTGGGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTTCCCAGAACTTTGCATAGGTCACTTGTATCACAAGTTTGGGCG  250

seq1  AGTTTCCAAAACCACAGCCTACTTTGGAGGTTGGGATGGAGGCCAGGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCAAAACCACAGCCTACTTTGGAGGTTGGGATGGAGGCCAGGTTC  300

seq1  ATGTGCATCGTCTATCAAGACAAAGTTGTAAAACAAGTCTGCTGGCTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCATCGTCTATCAAGACAAAGTTGTAAAACAAGTCTGCTGGCTTCA  350

seq1  TACTAGGATAGGAAGGGAGAGTGCAAAAACCAGTGGCAGGCCCCAAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGGATAGGAAGGGAGAGTGCAAAAACCAGTGGCAGGCCCCAAAGGA  400

seq1  TCGTGAAGAATTGAGCAATTAGGAGCACATGAATGGACGCATTTGCAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGAAGAATTGAGCAATTAGGAGCACATGAATGGACGCATTTGCAATG  450

seq1  ACTGTAATAATTATTCCTTGAATTTATAAAACTTACATAACTTTGCATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAATAATTATTCCTTGAATTTATAAAACTTACATAACTTTGCATTT  500

seq1  CATACATATTACCTCGTTAATTCTCATTGTTTAATAATTTAAAATGGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATATTACCTCGTTAATTCTCATTGTTTAATAATTTAAAATGGGGT  550

seq1  TTCTGTGCATGTAAGTTTTCA-TTGAGGCCTCATAATCACTCTGGGCAA-  598
      ||||||||||||||||||||| ||||||||||||||||||||||||||| 
seq2  TTCTGTGCATGTAAGTTTTCATTTGAGGCCTCATAATCACTCTGGGCAAT  600

seq1  TTTCCACAAGCCCACTGAGGCCTTGGCAGAGACA-TTATAAAGATTTATC  647
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTTCCACAAGCCCACTGAGGCCTTGGCAGAGACATTTATAAAGATTTATC  650

seq1  CAATCCATCAAGCCAGAAAAGAGCACACAGAAGAAAATTAACTCTTTTCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCATCAAGCCAGAAAAGAGCACACAGAAGAAAATTAACTCTTTTCA  700

seq1  TCCATCCCACCACCCAACATCAGGAGTGACTCCACTCTCAAGTGATTCTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCCACCACCCAACATCAGGAGTGACTCCACTCTCAAGTGATTCTG  750

seq1  GAAGGCTTTGCTTGTTCTCCTCCTTCCCAGCTCTCCAGCTGTGGTGTTGG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCTTTGCTTGTTCTCCTCCTTCCCAGCTCTCCAGCTGTGGTGTTGG  800

seq1  GAGTGGG  804
      |||||||
seq2  GAGTGGG  807