BAC Information

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BAC

Clone NameB6Ng01-006E04
Chromosome7 (Build37)
Map Location 93,022,432 - 93,165,468
singlet/doubletdoublet
Overlap geneEG620928, EG546980, LOC666382
Upstream geneLOC666276, Olfr290, ENSMUSG00000070600, F830104D24Rik, LOC620641, EG620672, Vmn2r-ps68, EG620697, Vmn2r-ps69, LOC330581, LOC100039339, Vmn2r70, Vmn2r-ps72, EG233445, Vmn2r-ps74, EG244114
Downstream geneLOC637652, LOC637667, EG666418, LOC100039471, EG546981, Vmn2r-ps86, Vmn2r76, Olfr310, Olfr309, Olfr308, Olfr307, Olfr306-ps1, Olfr305, Olfr304, Olfr303, Olfr301, Olfr1531-ps1, Olfr300-ps1, Olfr299, Olfr298, Olfr297, Olfr296-ps1, Olfr295, Olfr294, Olfr293, Olfr292, Folh1, EG546983, Vmn2r-ps87, LOC637896, EG621430
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006E04.bB6Ng01-006E04.g
ACCDH843171DH843172
length9191,119
definitionDH843171|Mus musculus domesticus DNA, BAC clone: B6Ng01-006E04, 5' end.DH843172|Mus musculus domesticus DNA, BAC clone: B6Ng01-006E04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,164,550 - 93,165,468)(93,022,432 - 93,023,552)
sequence
gaattcactctgtagaccaggctgggcttgaactcagaaatctgcctgcc
tctgtttaaagctatggaaaatacaatagtttaaaaaacagaaagggtga
tattaagtggaagcttctgttttgggatttttttgtttgtttgtttgttt
tgttttaaataactcatttgtatcatatgatgtttttcaggtagctctct
catgagagggcatgtgctatttttctgaaatcagatacttgagagtacat
gatgttcagaaagtaaataaaccatatcttacctacagtgagagcatgct
cttgaattgctacactgtgcattgctattctggtcttgactggtatttac
tggtctttgttttgcagaatatttcagctgaatcttgcctcttccactga
ttctagcctatttagttgagcctttctttttctattgaattgtactactg
taggacccccgaagggagaccctcaatcaagtctcagggattgcgagccc
agaaagccacaacagtcaagcttgctgcaaacacacaaggttttaatggc
acaccaaccagcatgctgaggtcaagacccatacaccacacaggggtaga
ggagtctgaccccaactctattttccagtaggcttataaaggcaaaaacc
agaacttagggggaggatcggagaggaaataggggaagtctaggggcgga
tatttacctcaaggcacctgggacattgaatcattttgtggttgtttttc
caaaagttccagggaattaggccatctggccgggggccagggcccatgtt
ctcagggcatcaatattttatttttttactcttcatttcccacttcttct
tgtgagtagctctaatcttagagcgaacccttctttcttctttcggcaaa
gtcaggtactgttgtcaga
gaattccttgccttgatatttttcttattaataataagtaaaaattaact
aaatcagttctctagatatttctccttttggagcatctgaaattacatac
agtgaactttcatggagtttaaattcttagagtgctggacataaaacttg
atatatgtttaaaaggtaactcttagccataatgtctcaactagaacaat
ttgagaataaattaaaggaattacaaaaaacatttacttatatatgacaa
ggcttatctgaaacagtatctagctcatcacaggcttataggagacatgc
aaatgtgtttctgaagatgttcttgttcaaactactctcctacaatcatt
gtcatctatatctgagcatttcgatttccggtccatcctacattttaccc
tgaatattgatttttattattaaatactcatttttctattatattaaccc
atggctctacccatttcttccaaatattttctttaatctaatccaaagca
aaaaaaacccatcatatccatttctattttattctgatatattctgttta
aaaatgaatagaatctttatttaaaagtgtcaatgtcaatgtgctaatct
ctctctctcacacacacacacaaacacacacacacatgtatatacatatg
tatatatagagacatatatatatatttatgataccattttaaatatgaaa
ttattgaaactttgaaatcttcttttgataaatgtcctataacattgtgg
agaaattattacaatttctttaattgaaatctcaaatacagtacccccat
tttacaaagagatattatataaaatgtatatcaatttatataaatcacat
tcaatcccatgaattcaaacatatttgacattttaggaaaggagaataaa
ttaaactgttgaatgagtatggtagttgtaaatatacagtaataatgaga
atgaaatttttaaatcctgtaaatgacagtcttggtaatggaaattatgt
aaccatagtatcctcctctcaattatggccaggtatccagacaatgtttt
tttttctagcacttcaaaatataaaaaaacaggtaatagctggatgggca
tctttcctgtaacaaatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_93164550_93165468
seq2: B6Ng01-006E04.b_44_962 (reverse)

seq1  TCTGACAACAGTACCTGACTTTGCCGAAAGAAGAA--GAGGGGTCGCTCT  48
      |||||||||||||||||||||||||||||||||||   |||| |||||||
seq2  TCTGACAACAGTACCTGACTTTGCCGAAAGAAGAAAGAAGGGTTCGCTCT  50

seq1  AAGATTAGAGCTACTCACAAGAAGAAGTGGGGAAATGAAGAGT-AAAAAA  97
      |||||||||||||||||||||||||||| |||||||||||||| ||||||
seq2  AAGATTAGAGCTACTCACAAGAAGAAGT-GGGAAATGAAGAGTAAAAAAA  99

seq1  TAAAATAATGACTGCCCTGAGAACATGGGCCCTGGCCCCCGGCCAGATGG  147
      ||||||| ||| ||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATTGA-TGCCCTGAGAACATGGGCCCTGGCCCCCGGCCAGATGG  148

seq1  CCTAATTCCCTGGAACTTTTGGAAAAAACAACCACAAAATGATTCAATGT  197
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CCTAATTCCCTGGAACTTTTGG-AAAAACAACCACAAAATGATTCAATGT  197

seq1  CCCAGGTGCCTTGAGGTAAATATCCGCCCCTAGACTTCCCCTATTTCCTC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGTGCCTTGAGGTAAATATCCGCCCCTAGACTTCCCCTATTTCCTC  247

seq1  TCCGATCCTCCCCCTAAGTTCTGGTTTTTGCCTTTATAAGCCTACTGGAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGATCCTCCCCCTAAGTTCTGGTTTTTGCCTTTATAAGCCTACTGGAA  297

seq1  AATAGAGTTGGGGTCAGACTCCTCTACCCCTGTGTGGTGTATGGGTCTTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAGTTGGGGTCAGACTCCTCTACCCCTGTGTGGTGTATGGGTCTTG  347

seq1  ACCTCAGCATGCTGGTTGGTGTGCCATTAAAACCTTGTGTGTTTGCAGCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGCATGCTGGTTGGTGTGCCATTAAAACCTTGTGTGTTTGCAGCA  397

seq1  AGCTTGACTGTTGTGGCTTTCTGGGCTCGCAATCCCTGAGACTTGATTGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGACTGTTGTGGCTTTCTGGGCTCGCAATCCCTGAGACTTGATTGA  447

seq1  GGGTCTCCCTTCGGGGGTCCTACAGTAGTACAATTCAATAGAAAAAGAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTCCCTTCGGGGGTCCTACAGTAGTACAATTCAATAGAAAAAGAAA  497

seq1  GGCTCAACTAAATAGGCTAGAATCAGTGGAAGAGGCAAGATTCAGCTGAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAACTAAATAGGCTAGAATCAGTGGAAGAGGCAAGATTCAGCTGAA  547

seq1  ATATTCTGCAAAACAAAGACCAGTAAATACCAGTCAAGACCAGAATAGCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTGCAAAACAAAGACCAGTAAATACCAGTCAAGACCAGAATAGCA  597

seq1  ATGCACAGTGTAGCAATTCAAGAGCATGCTCTCACTGTAGGTAAGATATG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACAGTGTAGCAATTCAAGAGCATGCTCTCACTGTAGGTAAGATATG  647

seq1  GTTTATTTACTTTCTGAACATCATGTACTCTCAAGTATCTGATTTCAGAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTTACTTTCTGAACATCATGTACTCTCAAGTATCTGATTTCAGAA  697

seq1  AAATAGCACATGCCCTCTCATGAGAGAGCTACCTGAAAAACATCATATGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGCACATGCCCTCTCATGAGAGAGCTACCTGAAAAACATCATATGA  747

seq1  TACAAATGAGTTATTTAAAACAAAACAAACAAACAAACAAAAAAATCCCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATGAGTTATTTAAAACAAAACAAACAAACAAACAAAAAAATCCCA  797

seq1  AAACAGAAGCTTCCACTTAATATCACCCTTTCTGTTTTTTAAACTATTGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAAGCTTCCACTTAATATCACCCTTTCTGTTTTTTAAACTATTGT  847

seq1  ATTTTCCATAGCTTTAAACAGAGGCAGGCAGATTTCTGAGTTCAAGCCCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCATAGCTTTAAACAGAGGCAGGCAGATTTCTGAGTTCAAGCCCA  897

seq1  GCCTGGTCTACAGAGTGAATTC  919
      ||||||||||||||||||||||
seq2  GCCTGGTCTACAGAGTGAATTC  919

seq1: chr7_93022432_93023552
seq2: B6Ng01-006E04.g_68_1186

seq1  GAATTCCTTGCCTTGATATTTTTCTTATTAATAATAAGTAAAAATTAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGCCTTGATATTTTTCTTATTAATAATAAGTAAAAATTAACT  50

seq1  AAATCAGTTCTCTAGATATTTCTCCTTTTGGAGCATCTGAAATTACATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGTTCTCTAGATATTTCTCCTTTTGGAGCATCTGAAATTACATAC  100

seq1  AGTGAACTTTCATGGAGTTTAAATTCTTAGAGTGCTGGACATAAAACTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAACTTTCATGGAGTTTAAATTCTTAGAGTGCTGGACATAAAACTTG  150

seq1  ATATATGTTTAAAAGGTAACTCTTAGCCATAATGTCTCAACTAGAACAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGTTTAAAAGGTAACTCTTAGCCATAATGTCTCAACTAGAACAAT  200

seq1  TTGAGAATAAATTAAAGGAATTACAAAAAACATTTACTTATATATGACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAATAAATTAAAGGAATTACAAAAAACATTTACTTATATATGACAA  250

seq1  GGCTTATCTGAAACAGTATCTAGCTCATCACAGGCTTATAGGAGACATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTATCTGAAACAGTATCTAGCTCATCACAGGCTTATAGGAGACATGC  300

seq1  AAATGTGTTTCTGAAGATGTTCTTGTTCAAACTACTCTCCTACAATCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGTTTCTGAAGATGTTCTTGTTCAAACTACTCTCCTACAATCATT  350

seq1  GTCATCTATATCTGAGCATTTCGATTTCCGGTCCATCCTACATTTTACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCTATATCTGAGCATTTCGATTTCCGGTCCATCCTACATTTTACCC  400

seq1  TGAATATTGATTTTTATTATTAAATACTCATTTTTCTATTATATTAACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATTGATTTTTATTATTAAATACTCATTTTTCTATTATATTAACCC  450

seq1  ATGGCTCTACCCATTTCTTCCAAATATTTTCTTTAATCTAATCCAAAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCTACCCATTTCTTCCAAATATTTTCTTTAATCTAATCCAAAGCA  500

seq1  AAAAAAACCCATCATATCCATTTCTATTTTATTCTGATATATTCTGTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACCCATCATATCCATTTCTATTTTATTCTGATATATTCTGTTTA  550

seq1  AAAATGAATAGAATCTTTATTTAAAAGTGTCAATGTCAATGTGCTAATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAATAGAATCTTTATTTAAAAGTGTCAATGTCAATGTGCTAATCT  600

seq1  CTCTCTCTCACACACACACACAAACACACACACACATGTATATACATATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCACACACACACACAAACACACACACACATGTATATACATATG  650

seq1  TATATATAGAGACATATATATATATTTATGATACCA-TTTAAATATGAAA  699
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TATATATAGAGACATATATATATATTTATGATACCATTTTAAATATGAAA  700

seq1  TTATTGAAACTTTGAAATCTTCTTTTGATAAATGTCCTATAACATTGTGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGAAACTTTGAAATCTTCTTTTGATAAATGTCCTATAACATTGTGG  750

seq1  AGAAATTATTACAATTTCTTTAATTGAAATCTCAAATACAGTACCCCCA-  798
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGAAATTATTACAATTTCTTTAATTGAAATCTCAAATACAGTACCCCCAT  800

seq1  TTTACAAAGAGATATTATATAAAATGTATATCAATTTATATAAATCACAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAAAGAGATATTATATAAAATGTATATCAATTTATATAAATCACAT  850

seq1  TCAATCCCATGAATTCAAACATATTTGACATTTTAGGAAAGGAGAATAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCCCATGAATTCAAACATATTTGACATTTTAGGAAAGGAGAATAAA  900

seq1  TTAAACTGTTGAATGAGTATGGTAGTTGTAAATATACAGTAATAATGAGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTAAACTGTTGAATGAGTATGGTAGTTGTAAATATACAGTAATAATGAG-  949

seq1  AATGAAATTTTTAAAT-CTGTAAATGACAGTCTTGGTAATGGAAAATTAT  997
      |||||||||||||||| ||||||||||||||||||||||||| |||||||
seq2  AATGAAATTTTTAAATCCTGTAAATGACAGTCTTGGTAATGG-AAATTAT  998

seq1  GTAACCATAGTAATCCT-CTCTCAAATATTGCCAGGTATCACAGACAATG  1046
      ||||||||||| ||||| ||||||| ||| |||||||||| |||||||||
seq2  GTAACCATAGT-ATCCTCCTCTCAATTATGGCCAGGTATC-CAGACAATG  1046

seq1  TATTTTATTCTAGCACTCAAAAATATAAAAAAACAAGTAATAGCTTGTAT  1096
      | |||| ||||||||||  |||||||||||||||| |||||||| || ||
seq2  TTTTTTTTTCTAGCACTTCAAAATATAAAAAAACAGGTAATAGC-TGGAT  1095

seq1  GGGCATCTTTCCTTGTAACAAATTA  1121
      |||||||||||| ||||||||||||
seq2  GGGCATCTTTCC-TGTAACAAATTA  1119