BAC Information

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BAC

Clone NameB6Ng01-006G11
Chromosome7 (Build37)
Map Location 33,439,000 - 33,440,171
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370
Downstream geneLOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962, EG626970, LOC100043859, LOC627004, LOC100043398, LOC100043401, Scgb2b1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006G11.bB6Ng01-006G11.g
ACCDH843272DH843273
length1,1501,181
definitionDH843272|Mus musculus domesticus DNA, BAC clone: B6Ng01-006G11, 5' end.DH843273|Mus musculus domesticus DNA, BAC clone: B6Ng01-006G11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaggctacccagatgacccttcaaccccctctacctgggccagt
aggggagcatttaccactgcacagtgacataaggcgactgttgggaaggg
tgctaagagtcaaggttgtggtaggccccctgctccacccatcttggaag
cagactgcttaagctcattcactcagaaaggacatacactggccactctg
gcattgccattttaggaatgccattttcttcatgaaaggtttcttttgac
agctcttttgtccttctttaggaagtgtggactgaacaaataacaatgga
ggaggcttaagacagcagagcaaagcctgaggcagacttgtaaaggctga
agggtcagcaggatgagctgtgaagtaggccaagagtcttactgctctat
ggtagcttaagcatttgatgggggaaatgcaggagagagtaggtagggtc
atagaatgaagagagggcagaggcagattctgaagaagaacacaaggtat
ccagaggacaggataattagacctcaattgccagaagtggtctaagcaat
tgtacagtctttggagactacactaaggcctggagactcatcatggcaga
gtgccagaaaggctcatcttcctgtccatgctgtggaggatctgcagcac
aggtagtcatcagggtcccatgcttttaagaggaattctcaggacagtat
accactgctgcctctacaacctgctacctgttggagatagtcccttgctg
ctgtctattcaaatgctaagtactgggactcagggaatggaaccccccaa
acctccaacttcttgccaatctctttaacaaattctcacatacaccagat
gttgcttagtaaatcagttcacctaaatctctgactatctaagaaaatgt
gactgccaggcaatgatagagagaagagaggtatgtggggcttttttccc
ctgggatgggtgtcacatataagcatataggcagaggagagggagagaat
taaaggaggaagatggagaccgggaggctccactaggcctgatgacttct
aagcctgacaggactgtggactatgagtacagctgatggagacggaatac
cctgggcacctaatgcaataactcaggcctagatgtatgcaaggtcaaaa

gaattcaaattgatccattcttgtcttctctttacaaagctcaggtataa
ctggatcaaaaacctccacataaaaccagagacactgaaatttatagagg
agaaagttgggaaaagcctcgaagatatgagcacaggagaaaaattcctg
aacagagcaccaatgtcttgtggtgtaagattgagaatcaacaaatggga
cctcataaaattgcaaagattctgtaaggcaaaagacactgtcagtaaga
caaaaaggcgaccaacatattgggaaaggatttttactaatcctaaatct
gatagggatctaatttccaatatatacaaacaaacaagaagctggacttc
agaaaacaaataaccccattaaaaaaaaacgaggcacagagtaaacaaag
aattctcaactgaggaataccgaatggctgtgaatcagctgaataaatga
ttaacatccttgatcatcaggtaaatgcaaatcaaaacaaccctgagatt
ctacctcacaccagtcagaatcactaagatcacaaattcaggtgacagca
gatgctggcgaggatgtgaagaaagaggagcattcctccattgttggtgg
gattgcaagcttgtacaaccactctggaaaacattctgcggttccttaga
gaattggacattgtactaccagaggttctagcaatatctcttctgggcat
atacccagaagatgttccaatggcaatagtaacacatgctccactatgtt
caaagcagccttatttataataacagaatctggaaagtacccagatgtcc
atcaacagaggaatggataaagaaaatgttgaacttttacacaatggatt
actactcagctattagaaacagtgaatttatgaaatttctaggtaaatgg
atggatctggagggtatcatccccagtgagttactcattcacaaaagaag
tcaagtgatatgcactcactgataaatgatatagcccagaatttagaata
tcagattcatttgcaaaacacataaaacttagagacaagtccaatgtgat
ctttgtccccttatatgggaaaattcatgaggatacagaacaatttgtag
ctgattcagcttgcatccgaactgtcactgatctcttatgaagccatgcg
cgaacctatggcaatgtcgccagaaattgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_33439000_33440171
seq2: B6Ng01-006G11.b_45_1194 (reverse)

seq1  TTTTGA-CTTGCATACAATCTATAGGCCTGATGTTAATTGCTATTTAAGT  49
      |||||| ||||||||||   | ||||||||| ||| ||||| |||     
seq2  TTTTGACCTTGCATACA---TCTAGGCCTGA-GTT-ATTGC-ATT----A  40

seq1  GTTGCCCAGGGTTATTTCTGCTCCATCAGCTTGTACTCATGGTCCACAGC  99
      | ||||||||| |||| |  |||||||||| ||||||||| |||||||| 
seq2  GGTGCCCAGGG-TATTCCGTCTCCATCAGC-TGTACTCATAGTCCACAG-  87

seq1  TCCTGGTCATGTGCTTCTGAGTCATCAGGCCCTAGTGGAGCCTTCCCCTG  149
      |||| ||||   ||||   |||||||||| |||||||||||||  ||| |
seq2  TCCT-GTCA--GGCTTAGAAGTCATCAGG-CCTAGTGGAGCCT--CCCGG  131

seq1  TCTCCATCTTCTTCCTTTAATTCTCT-CCTCTTCTCTTGCCTTATAATGC  198
      ||||||||||| |||||||||||||| ||||| ||| |||| ||| ||||
seq2  TCTCCATCTTCCTCCTTTAATTCTCTCCCTCTCCTC-TGCC-TAT-ATGC  178

seq1  TTATATGTGACACCCATCCCAGGGGGAAAAAAAGCCCCACATACCTCTCT  248
      |||||||||||||||||||||||||  |||||||||||||||||||||||
seq2  TTATATGTGACACCCATCCCAGGGG--AAAAAAGCCCCACATACCTCTCT  226

seq1  TCTCTCTATCATTGCCTGGCAGTCACATTTTCTTAGATAGTCAGAGATTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTATCATTGCCTGGCAGTCACATTTTCTTAGATAGTCAGAGATTT  276

seq1  AGGTGAACTGATTTACTAAGCAACATCTGGTGTATGTGAGAATTTGTTAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAACTGATTTACTAAGCAACATCTGGTGTATGTGAGAATTTGTTAA  326

seq1  AGAGATTGGCAAGAAGTTGGAGGTTTGGGGGGTTCCATTCCCTGAGTCCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTGGCAAGAAGTTGGAGGTTTGGGGGGTTCCATTCCCTGAGTCCC  376

seq1  AGTACTTAGCATTTGAATAGACAGCAGCAAGGGACTATCTCCAACAGGTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTTAGCATTTGAATAGACAGCAGCAAGGGACTATCTCCAACAGGTA  426

seq1  GCAGGTTGTAGAGGCAGCAGTGGTATACTGTCCTGAGAATTCCTCTTAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTTGTAGAGGCAGCAGTGGTATACTGTCCTGAGAATTCCTCTTAAA  476

seq1  AGCATGGGACCCTGATGACTACCTGTGCTGCAGATCCTCCACAGCATGGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGGGACCCTGATGACTACCTGTGCTGCAGATCCTCCACAGCATGGA  526

seq1  CAGGAAGATGAGCCTTTCTGGCACTCTGCCATGATGAGTCTCCAGGCCTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGATGAGCCTTTCTGGCACTCTGCCATGATGAGTCTCCAGGCCTT  576

seq1  AGTGTAGTCTCCAAAGACTGTACAATTGCTTAGACCACTTCTGGCAATTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAGTCTCCAAAGACTGTACAATTGCTTAGACCACTTCTGGCAATTG  626

seq1  AGGTCTAATTATCCTGTCCTCTGGATACCTTGTGTTCTTCTTCAGAATCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTAATTATCCTGTCCTCTGGATACCTTGTGTTCTTCTTCAGAATCT  676

seq1  GCCTCTGCCCTCTCTTCATTCTATGACCCTACCTACTCTCTCCTGCATTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGCCCTCTCTTCATTCTATGACCCTACCTACTCTCTCCTGCATTT  726

seq1  CCCCCATCAAATGCTTAAGCTACCATAGAGCAGTAAGACTCTTGGCCTAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCATCAAATGCTTAAGCTACCATAGAGCAGTAAGACTCTTGGCCTAC  776

seq1  TTCACAGCTCATCCTGCTGACCCTTCAGCCTTTACAAGTCTGCCTCAGGC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGCTCATCCTGCTGACCCTTCAGCCTTTACAAGTCTGCCTCAGGC  826

seq1  TTTGCTCTGCTGTCTTAAGCCTCCTCCATTGTTATTTGTTCAGTCCACAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTCTGCTGTCTTAAGCCTCCTCCATTGTTATTTGTTCAGTCCACAC  876

seq1  TTCCTAAAGAAGGACAAAAGAGCTGTCAAAAGAAACCTTTCATGAAGAAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAAAGAAGGACAAAAGAGCTGTCAAAAGAAACCTTTCATGAAGAAA  926

seq1  ATGGCATTCCTAAAATGGCAATGCCAGAGTGGCCAGTGTATGTCCTTTCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCATTCCTAAAATGGCAATGCCAGAGTGGCCAGTGTATGTCCTTTCT  976

seq1  GAGTGAATGAGCTTAAGCAGTCTGCTTCCAAGATGGGTGGAGCAGGGGGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAATGAGCTTAAGCAGTCTGCTTCCAAGATGGGTGGAGCAGGGGGC  1026

seq1  CTACCACAACCTTGACTCTTAGCACCCTTCCCAACAGTCGCCTTATGTCA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCACAACCTTGACTCTTAGCACCCTTCCCAACAGTCGCCTTATGTCA  1076

seq1  CTGTGCAGTGGTAAATGCTCCCCTACTGGCCCAGGTAGAGGGGGTTGAAG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCAGTGGTAAATGCTCCCCTACTGGCCCAGGTAGAGGGGGTTGAAG  1126

seq1  GGTCATCTGGGTAGCCTAGAATTC  1172
      ||||||||||||||||||||||||
seq2  GGTCATCTGGGTAGCCTAGAATTC  1150