BAC Information

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BAC

Clone NameB6Ng01-007A01
Chromosome7 (Build37)
Map Location 143,706,583 - 143,821,546
singlet/doubletdoublet
Overlap genenone
Upstream geneClrn3, Ptpre, Mki67, LOC668764
Downstream geneLOC546009, EG621677, EG668771, Mgmt, EG621804, Ebf3, 9430038I01Rik, Txnl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007A01.bB6Ng01-007A01.g
ACCDH843703DH843704
length758281
definitionDH843703|Mus musculus domesticus DNA, BAC clone: B6Ng01-007A01, 5' end.DH843704|Mus musculus domesticus DNA, BAC clone: B6Ng01-007A01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(143,820,790 - 143,821,546)(143,706,583 - 143,706,863)
sequence
gaattcagctcccttccctaacgtgggtcctcactcatggaatgagctca
ctcaggatgaagagctaggcagggcattgggccctggaagaaagcttggg
caacatgagttctgagagcacacggggaggtgaaataagaagctaacacc
aattctcttcccgtgctgcacctgaaccaggaaacctcagtttattaaaa
accactttccttttcttcctagtctatcattgctattatcctctcttctt
tgacactactgacaattcacatctctccccaattaaaacatcccccttat
gggtcggacttcctcagcagtggccgatgtttaatagaatggaggttgtg
gttgaccctgctcactccagcccagagatttttgtatgttgggtttgtac
cctgcagtgtttcggtattcatttatcattgctgataggtatttggtgaa
aatggcaggatttatttgtgatgtaccagaccatgttatataatctatgt
aacctgtgacacagtggtgacctgactccccagcttctgttttagatgca
tgttatttctttctctcgagtcgggtggtggtgattctggccatctcccc
cccccccataagtttagagagaaaacataaagctttttcctgtacaagac
aacgttagccttggtcttttccataactgaactatgttctttttgatacg
taatttttccaggatttttgttagtacacgttacacaaaataatggggca
ccattggg
cttatgtgtggtaatgtgatgctgtaggctgagtgggagcctggttaccc
atgccatcagtctttttcttcaagagacatccaacgtccctctctactgc
ctctgccttatcggaccatacacttgcctctcactctgtgttgctgctcc
aagcttggtgtcttcaacaccaggaagtctcttcagatcctcagtgggtc
tagacacacacacacacacacacacacacacacacacacacacacacgaa
catattggatgggagatggaggagggagttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_143820790_143821546
seq2: B6Ng01-007A01.b_46_803 (reverse)

seq1  CACAATGGTG-CCCATTATTTTGTGTAACGTGTACTAACAAAAATCCTGG  49
      | |||||||| ||||||||||||||||||||||||||||||||||||| |
seq2  CCCAATGGTGCCCCATTATTTTGTGTAACGTGTACTAACAAAAATCCT-G  49

seq1  GAAAAATTACGTATC-AAAAGAACATAGTTCAGTTATGGAATAGACCAAG  98
      ||||||||||||||| ||||||||||||||||||||||||| ||||||||
seq2  GAAAAATTACGTATCAAAAAGAACATAGTTCAGTTATGGAAAAGACCAAG  99

seq1  GCTAACGTTGTCTTGTACAGGAAAAAGCTTTATGTTTTCTCTCTAAACTT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACGTTGTCTTGTACAGGAAAAAGCTTTATGTTTTCTCTCTAAACTT  149

seq1  ATGGGGGGGGGGGAGATGGCCAGAATCACCACCACCCGACTCGAGAGAAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGGGGGGGGAGATGGCCAGAATCACCACCACCCGACTCGAGAGAAA  199

seq1  GAAATAACATGCATCTAAAACAGAAGCTGGGGAGTCAGGTCACCACTGTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAACATGCATCTAAAACAGAAGCTGGGGAGTCAGGTCACCACTGTG  249

seq1  TCACAGGTTACATAGATTATATAACATGGTCTGGTACATCACAAATAAAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGGTTACATAGATTATATAACATGGTCTGGTACATCACAAATAAAT  299

seq1  CCTGCCATTTTCACCAAATACCTATCAGCAATGATAAATGAATACCGAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCATTTTCACCAAATACCTATCAGCAATGATAAATGAATACCGAAA  349

seq1  CACTGCAGGGTACAAACCCAACATACAAAAATCTCTGGGCTGGAGTGAGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCAGGGTACAAACCCAACATACAAAAATCTCTGGGCTGGAGTGAGC  399

seq1  AGGGTCAACCACAACCTCCATTCTATTAAACATCGGCCACTGCTGAGGAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCAACCACAACCTCCATTCTATTAAACATCGGCCACTGCTGAGGAA  449

seq1  GTCCGACCCATAAGGGGGATGTTTTAATTGGGGAGAGATGTGAATTGTCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCGACCCATAAGGGGGATGTTTTAATTGGGGAGAGATGTGAATTGTCA  499

seq1  GTAGTGTCAAAGAAGAGAGGATAATAGCAATGATAGACTAGGAAGAAAAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGTCAAAGAAGAGAGGATAATAGCAATGATAGACTAGGAAGAAAAG  549

seq1  GAAAGTGGTTTTTAATAAACTGAGGTTTCCTGGTTCAGGTGCAGCACGGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGGTTTTTAATAAACTGAGGTTTCCTGGTTCAGGTGCAGCACGGG  599

seq1  AAGAGAATTGGTGTTAGCTTCTTATTTCACCTCCCCGTGTGCTCTCAGAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAATTGGTGTTAGCTTCTTATTTCACCTCCCCGTGTGCTCTCAGAA  649

seq1  CTCATGTTGCCCAAGCTTTCTTCCAGGGCCCAATGCCCTGCCTAGCTCTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGTTGCCCAAGCTTTCTTCCAGGGCCCAATGCCCTGCCTAGCTCTT  699

seq1  CATCCTGAGTGAGCTCATTCCATGAGTGAGGACCCACGTTAGGGAAGGGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTGAGTGAGCTCATTCCATGAGTGAGGACCCACGTTAGGGAAGGGA  749

seq1  GCTGAATTC  757
      |||||||||
seq2  GCTGAATTC  758

seq1: chr7_143706583_143706863
seq2: B6Ng01-007A01.g_71_351

seq1  CTTATGTGTGGTAATGTGATGCTGTAGGCTGAGTGGGAGCCTGGTTACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGTGTGGTAATGTGATGCTGTAGGCTGAGTGGGAGCCTGGTTACCC  50

seq1  ATGCCATCAGTCTTTTTCTTCAAGAGACATCCAACGTCCCTCTCTACTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCATCAGTCTTTTTCTTCAAGAGACATCCAACGTCCCTCTCTACTGC  100

seq1  CTCTGCCTTATCGGACCATACACTTGCCTCTCACTCTGTGTTGCTGCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCTTATCGGACCATACACTTGCCTCTCACTCTGTGTTGCTGCTCC  150

seq1  AAGCTTGGTGTCTTCAACACCAGGAAGTCTCTTCAGATCCTCAGTGGGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTGGTGTCTTCAACACCAGGAAGTCTCTTCAGATCCTCAGTGGGTC  200

seq1  TAGACACACACACACACACACACACACACACACACACACACACACACGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACACACACACACACACACACACACACACACACACACACACACGAA  250

seq1  CATATTGGATGGGAGATGGAGGAGGGAGTTG  281
      |||||||||||||||||||||||||||||||
seq2  CATATTGGATGGGAGATGGAGGAGGGAGTTG  281