BAC Information

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BAC

Clone NameB6Ng01-007H10
Chromosome7 (Build37)
Map Location 151,368,050 - 151,512,048
singlet/doubletdoublet
Overlap geneShank2
Upstream geneKcnq1, Cdkn1c, Slc22a18, Phlda2, Nap1l4, Cars, Tnfrsf26, Tnfrsf22, Tnfrsf23, Osbpl5, Mrgprg, Mrgpre, Nadsyn1, Dhcr7, Gm498
Downstream geneCttn, Ppfia1, Fadd, Tmem16a, LOC669079, LOC677315, Fgf3, Fgf4, Fgf15, Oraov1, Ccnd1, 1810010D01Rik, LOC100040049, Tpcn2, Mrgprf, Mrgprd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007H10.bB6Ng01-007H10.g
ACCDH844025DH844026
length9231,033
definitionDH844025|Mus musculus domesticus DNA, BAC clone: B6Ng01-007H10, 5' end.DH844026|Mus musculus domesticus DNA, BAC clone: B6Ng01-007H10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,368,050 - 151,368,965)(151,511,002 - 151,512,048)
sequence
gaattcaggtccagataactcttctccttgtgtagtctgcagagtgcagt
agactatgattactttggcaggccacaacacagcacgggtattgtacttc
ctacctgtgaattggatgggcccctccctctgtttactctcaaagatata
gtggatctgcctactgaaggctgatgactgcaccttgtctcctatgcccc
tcctgaagcagtcttttttgagccagtgtgatgagcctattgagtccttg
tccctgtcatagctcctagggatgggtagttaggggcagggtaaactaag
gtgccttttgtgcttgctagtttggtgtttctttctctaaatcttcaata
gccagaaaagaacagggtgacatgtgtccagtctgtaggcatagcaatga
tgaatggtaatacactagagttcaaggcccaattgctgggtatgatattg
gctatgcccaagccccagctaggagctctcttggcctccattaatcccag
gcctttcccagggagacattgatttctgcaggcgtctgctaggtgaccct
tcctgatcatacttggcattctttgactctacacatcggccccgccccat
ttcttcccaagaccaaccacagcacctccttattgaatgttttcacctct
gtcttgtgccactccggtccccaccctactgccacagccacagtgcccct
aggctctaccttgctgtgtgttcccttcagacagcttctgtggcctcttt
tgcagtgcctgatcctcaccctaactcaaacaagcctgtgtgcactctta
ctttgacttttggttgtcaccccgtcttagcagaaacattacctggtttg
gagtttactacaaaagcctctgcagcttcctcctatctttctgtgtctag
atgtgggtgctgcccggtgatgg
gaattcactcatcttttgggttctttctaccctaaattgagccatgattt
tggaaagattaaaaaacagtgtatatacgtcaactccaatgtctgagcag
ctgagagggcatcttagggtgctgtcataaaggggaggacttctcagtag
ccaaaccctcaggatgggccatgcgggagcactgggagtgctggggaaat
cggcttcacttcctctgagcaggatggataaaggcaactctctgttctcc
tggcaacacttgggagcgagaaactggcggctgctagaagagaagcaaac
gcctccttccctgccacctgccagctgccgatggcgcccacggtggggac
agggatatggacatggaaggcaggccagagggaagcttgctgttgagatc
ccggaaaaggggagaggggcagtgttgcagggtttgaaggactggatggg
ttagctctgtgcagcggctgccacagagtaagagagccagccaccagggc
taggctgttggggcacaggaggccctgcagggagcctctctgatcctagt
gcatagatcctaggaagaagcaaatgcaccagggccttcctcacagaaca
caggtatgacgtgacaggcagctacggacagaggtacctaccaagactga
tggtgcatctcctttatatctaagccgccaggttcactgtgtcctgaagg
tcactgtgtcttacaggtcagagctaaatgcttggtccccagggcagctc
tcctagaaagtcccatgggaaccttctggaggtgacccaagggaggtttt
agattctggggaagtgtcttcagatggcaggtttgggaagagagaattgt
tacaaacggagttgactgtcttctgctctggttggaaagtgattattgaa
catgattctcctccctcccagatatcaaatctatgagtcatcaggctttg
actgagccgactgtagcctgaaacctcagaactgagctgagcagtctttt
gtccctataagcttggcaggttctggtgtctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_151368050_151368965
seq2: B6Ng01-007H10.b_34_957

seq1  GGAATTCAGGTCCAGATAACTCTTCTCCTTGTGTAGTCTGCAGAGTGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCAGGTCCAGATAACTCTTCTCCTTGTGTAGTCTGCAGAGTGCAG  50

seq1  TAGACTATGATTACTTTGGCAGGCCACAACACAGCACGGGTATTGTACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTATGATTACTTTGGCAGGCCACAACACAGCACGGGTATTGTACTT  100

seq1  CCTACCTGTGAATTGGATGGGCCCCTCCCTCTGTTTACTCTCAAAGATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCTGTGAATTGGATGGGCCCCTCCCTCTGTTTACTCTCAAAGATAT  150

seq1  AGTGGATCTGCCTACTGAAGGCTGATGACTGCACCTTGTCTCCTATGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGATCTGCCTACTGAAGGCTGATGACTGCACCTTGTCTCCTATGCCC  200

seq1  CTCCTGAAGCAGTCTTTTTTGAGCCAGTGTGATGAGCCTATTGAGTCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGAAGCAGTCTTTTTTGAGCCAGTGTGATGAGCCTATTGAGTCCTT  250

seq1  GTCCCTGTCATAGCTCCTAGGGATGGGTAGTTAGGGGCAGGGTAAACTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTGTCATAGCTCCTAGGGATGGGTAGTTAGGGGCAGGGTAAACTAA  300

seq1  GGTGCCTTTTGTGCTTGCTAGTTTGGTGTTTCTTTCTCTAAATCTTCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCTTTTGTGCTTGCTAGTTTGGTGTTTCTTTCTCTAAATCTTCAAT  350

seq1  AGCCAGAAAAGAACAGGGTGACATGTGTCCAGTCTGTAGGCATAGCAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAAAAGAACAGGGTGACATGTGTCCAGTCTGTAGGCATAGCAATG  400

seq1  ATGAATGGTAATACACTAGAGTTCAAGGCCCAATTGCTGGGTATGATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGGTAATACACTAGAGTTCAAGGCCCAATTGCTGGGTATGATATT  450

seq1  GGCTATGCCCAAGCCCCAGCTAGGAGCTCTCTTGGCCTCCATTAATCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATGCCCAAGCCCCAGCTAGGAGCTCTCTTGGCCTCCATTAATCCCA  500

seq1  GGCCTTTCCCAGGGAGACATTGATTTCTGCAGGCGTCTGCTAGGTGACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTTCCCAGGGAGACATTGATTTCTGCAGGCGTCTGCTAGGTGACCC  550

seq1  TTCCTGATCATACTTGGCATTCTTTGACTCTACACATCGGCCCCGCCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGATCATACTTGGCATTCTTTGACTCTACACATCGGCCCCGCCCCA  600

seq1  TTTCTTCCCAAGACCAACCACAGCACCTCCTTATTGAATG-TTTCACCTC  649
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTTCTTCCCAAGACCAACCACAGCACCTCCTTATTGAATGTTTTCACCTC  650

seq1  TGTCTTGTGCCACTCCGGT-CCCACCCTACTGCCACAGCCACAGTG-CCC  697
      ||||||||||||||||||| |||||||||||||||||||||||||| |||
seq2  TGTCTTGTGCCACTCCGGTCCCCACCCTACTGCCACAGCCACAGTGCCCC  700

seq1  TAGGCTCTACCTTGCTGTGTGTT-CCTTCAGACAGCTTCTGTGGCCTCTT  746
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TAGGCTCTACCTTGCTGTGTGTTCCCTTCAGACAGCTTCTGTGGCCTCTT  750

seq1  TTGCAGTGCCTGACCCTCACCCTAGCTCAGACAAGCCTGTGTGCACTCTT  796
      ||||||||||||| |||||||||| |||| ||||||||||||||||||||
seq2  TTGCAGTGCCTGATCCTCACCCTAACTCAAACAAGCCTGTGTGCACTCTT  800

seq1  ACTTTGAC-TTTGGTTGTCACCCCAGTCTCAGCAGAAACATTACCTGG-T  844
      |||||||| ||||||||||||||| |||| |||||||||||||||||| |
seq2  ACTTTGACTTTTGGTTGTCACCCC-GTCTTAGCAGAAACATTACCTGGTT  849

seq1  TGGAGTTCACTAC-AAAGCCTCTGCAGCTT-CTCCCATC-TTCTGTGCTC  891
      ||||||| ||||| |||||||||||||||| |||| ||| |||||||   
seq2  TGGAGTTTACTACAAAAGCCTCTGCAGCTTCCTCCTATCTTTCTGTGTCT  899

seq1  AGATGTGTGTGCTGCCCGGTGATGG  916
      ||||||| |||||||||||||||||
seq2  AGATGTGGGTGCTGCCCGGTGATGG  924

seq1: chr7_151511002_151512048
seq2: B6Ng01-007H10.g_68_1100 (reverse)

seq1  TGAGACACCTGAGCCTGCCAGCTTTATGGGGACAAAAGACTGCTCAGCTC  50
      ||||||||| || |||||||   |||| ||||||||||||||||||||||
seq2  TGAGACACCAGAACCTGCCAAGCTTATAGGGACAAAAGACTGCTCAGCTC  50

seq1  AGGTCCTGGAGGTTTCAAGGCTACAGTCGGGCTCAGTCAAAGCCTGGATG  100
      || ||   |||||||| ||||||||||| |||||||||||||||| ||||
seq2  AGTTC--TGAGGTTTC-AGGCTACAGTC-GGCTCAGTCAAAGCCT-GATG  95

seq1  ACTCATAGATTTGATATCTGGGGAGGGAAGGAGACATCAATGTTCAATAA  150
      ||||||||||||||||||| ||||||| |||||| ||| |||||||||||
seq2  ACTCATAGATTTGATATCT-GGGAGGG-AGGAGA-ATC-ATGTTCAATAA  141

seq1  GTCACCTTTCCAACCAGAGCAGAAGGACAGTCAGACTCCAGTTTTTGTAA  200
       ||| ||||||||||||||||||| |||||||| |||||    |||||||
seq2  -TCA-CTTTCCAACCAGAGCAGAA-GACAGTCA-ACTCC---GTTTGTAA  184

seq1  CAATTCTCTC-TCCCAAACCTGCCATCTGAAGACACCTCCCCAGAATCTA  249
      |||||||||| ||||||||||||||||||||||||| |||||||||||||
seq2  CAATTCTCTCTTCCCAAACCTGCCATCTGAAGACACTTCCCCAGAATCTA  234

seq1  AAACCTCCCTTGGGTCACCTCCAGAAGGTT-CCATGGGACTTTCTAGGAG  298
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAACCTCCCTTGGGTCACCTCCAGAAGGTTCCCATGGGACTTTCTAGGAG  284

seq1  AGCTGCCCTGGGGACCAAGCATTTAGCTCTGACCTGTAAGACACAGTGAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCCCTGGGGACCAAGCATTTAGCTCTGACCTGTAAGACACAGTGAC  334

seq1  CTTCAGGACACAGTGAACCTGGCGGCTTAGATATAAAGGAGATGCACCAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGGACACAGTGAACCTGGCGGCTTAGATATAAAGGAGATGCACCAT  384

seq1  CAGTCTTGGTAGGTACCTCTGTCCGTAGCTGCCTGTCACGTCATACCTGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTGGTAGGTACCTCTGTCCGTAGCTGCCTGTCACGTCATACCTGT  434

seq1  GTTCTGTGAGGAAGGCCCTGGTGCATTTGCTTCTTCCTAGGATCTATGCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTGAGGAAGGCCCTGGTGCATTTGCTTCTTCCTAGGATCTATGCA  484

seq1  CTAGGATCAGAGAGGCTCCCTGCAGGGCCTCCTGTGCCCCAACAGCCTAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGATCAGAGAGGCTCCCTGCAGGGCCTCCTGTGCCCCAACAGCCTAG  534

seq1  CCCTGGTGGCTGGCTCTCTTACTCTGTGGCAGCCGCTGCACAGAGCTAAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGTGGCTGGCTCTCTTACTCTGTGGCAGCCGCTGCACAGAGCTAAC  584

seq1  CCATCCAGTCCTTCAAACCCTGCAACACTGCCCCTCTCCCCTTTTCCGGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCAGTCCTTCAAACCCTGCAACACTGCCCCTCTCCCCTTTTCCGGG  634

seq1  ATCTCAACAGCAAGCTTCCCTCTGGCCTGCCTTCCATGTCCATATCCCTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAACAGCAAGCTTCCCTCTGGCCTGCCTTCCATGTCCATATCCCTG  684

seq1  TCCCCACCGTGGGCGCCATCGGCAGCTGGCAGGTGGCAGGGAAGGAGGCG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCACCGTGGGCGCCATCGGCAGCTGGCAGGTGGCAGGGAAGGAGGCG  734

seq1  TTTGCTTCTCTTCTAGCAGCCGCCAGTTTCTCGCTCCCAAGTGTTGCCAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTCTCTTCTAGCAGCCGCCAGTTTCTCGCTCCCAAGTGTTGCCAG  784

seq1  GAGAACAGAGAGTTGCCTTTATCCATCCTGCTCAGAGGAAGTGAAGCCGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACAGAGAGTTGCCTTTATCCATCCTGCTCAGAGGAAGTGAAGCCGA  834

seq1  TTTCCCCAGCACTCCCAGTGCTCCCGCATGGCCCATCCTGAGGGTTTGGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCAGCACTCCCAGTGCTCCCGCATGGCCCATCCTGAGGGTTTGGC  884

seq1  TACTGAGAAGTCCTCCCCTTTATGACAGCACCCTAAGATGCCCTCTCAGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGAAGTCCTCCCCTTTATGACAGCACCCTAAGATGCCCTCTCAGC  934

seq1  TGCTCAGACATTGGAGTTGACGTATATACACTGTTTTTTAATCTTTCCAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGACATTGGAGTTGACGTATATACACTGTTTTTTAATCTTTCCAA  984

seq1  AATCATGGCTCAATTTAGGGTAGAAAGAACCCAAAAGATGAGTGAATTC  1047
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATGGCTCAATTTAGGGTAGAAAGAACCCAAAAGATGAGTGAATTC  1033