BAC Information

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BAC

Clone NameB6Ng01-007K17
Chromosome7 (Build37)
Map Location 98,699,100 - 98,824,311
singlet/doubletdoublet
Overlap geneDlg2
Upstream geneLOC666689, LOC621816, LOC100039943
Downstream geneCcdc90b, Ankrd42, Pcf11, LOC676240
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007K17.bB6Ng01-007K17.g
ACCDH844166DH844167
length1,0631,113
definitionDH844166|Mus musculus domesticus DNA, BAC clone: B6Ng01-007K17, 5' end.DH844167|Mus musculus domesticus DNA, BAC clone: B6Ng01-007K17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,823,252 - 98,824,311)(98,699,100 - 98,700,220)
sequence
gaattcacttccatttttcctacctattattatgattatatcaacttttt
ggattcaaatggaatgacaacttatttgagaagagataaagctatgtttt
ggaacaactaagaagcaatagaatggcagagtctcgttagtattatacac
cccacataatgggaagttggcaaagagccttgggaggaagtcaagtcatt
tccagagccctctgttatagcagccggaaattatgctgcctgattttcat
gcaatacagtaaatatatctgagaatatgatctcagctcccaaacattaa
gaccatttgtcccccttttgtaccagaggtgggtcaatgggttattataa
atcattttacattttgctttaccaaagattatttttagtgtcattatcag
ccacccttagtattgtgatattttacaacctatttatgaaattaaagagt
aaaaagtattataaaactctcaaagtagatttagatttaacagacacatg
cattcttgtgtttgtgatagtgtacagtctctgtgtgatgagacatttcc
atatagttaaaatgatggttaagtactacaagtgtacataatgaatgatt
caagacatatacatgcacgtttcaatttcagcatattttctcccctaaat
aataagggaaatgttttaaattaagaactgtttcaagtgaacggaataaa
gtatactttggaaagtaagctaatgttctcccagtgataaattaggaatg
acacagaatattaatttctctctatataaagctatgcatatttgtaatga
atatgtttattgcatatatgaaaatatattataattattttatatatata
tatatatatacagtatagacaaataagttttagaaatacttgcatgtata
ttttaaatttatgggacaatcatgaattataaaattaaagtgatctgtgg
ccatctaatttggatgggtagagaaagaagaagagagagaatcatcagtt
ctagctcaggacttttgcaggtctgaaaaaaagaaagagagaaggggaaa
ttcttatgtgcaa
gaattctccttccactagctatagaccaaattatgtcctcttcaaagtcc
tagtccatagtgtgacttaatttaaagatagatcttttaggaaataattc
ttttaaattacattaaaatgatagagtccccatcagtaggattagttgcc
atataagaggaggaatgggaaattgtattgcttctcctgacccctagtac
tgaccctcattttctctcagtggctcgggatacacacaaaaaaggctaca
atgaaggaatgaatggtcacaagaacccaaagattattgaaactctgact
ttggacttcctgatcttcaatacagtgcaaacttactttctgctctttga
gctgctgaatctctgatactttgttttagcagaagaagaaagctgaatta
caacctcctaccgtaatggccatataggatactttgaaataaggagtagt
tttctggtgccaaacatgggtctcatcatcaaggatgaataggtaggtta
gctgagtgttgctatgaatacaaagtaaataagctatggaacccacacaa
cctcaacagatcaatctcatctgatcttttgaagaaacaagaaaggctgt
taaaaatagatagtaatcaaaaaagaaaatagatagctgctggttttgga
gggtcagtttatttgactgtatattcttttgtcaaactcataggacaaga
gaatgaatgctaactattcatccagcaaactctatataaacttttaaaaa
gcactcattaaatcttgcctttcctttccatctctacttgttactattca
accatgttagtaggcttcccatctgtctttgtttctttttctgttgctgt
gataaaataccatgattagaaggactcagtggaaataaagtttctttctc
ctcactttgagggtgtagtctgtcatagtggagactcagagtggcaggtt
gacgaagctagtcacatcacagccacatcaggattgagtggaggcaggag
cttcccctgcttggctcttttggctacttaattaatgccgatcccagcca
gggatggtggggcaagggaggtgcattcaggcatgcccgatggtcctgtt
ttccccatgattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_98823252_98824311
seq2: B6Ng01-007K17.b_43_1105 (reverse)

seq1  TTGCACATAAGAATTCCCCCTTTCTCTCTTTC-TTATCTCAGACCTGCAA  49
      ||||||||||||||| |||| ||||||||||| || | ||||||||||||
seq2  TTGCACATAAGAATTTCCCC-TTCTCTCTTTCTTTTTTTCAGACCTGCAA  49

seq1  AAGTTCTGTGCTAG-ACTGATGGTTCTCTCTCTTTCTCTTTTCTCTACCC  98
      |||| ||| ||||| ||||||| ||||||||| ||||  |||||||||||
seq2  AAGTCCTGAGCTAGAACTGATGATTCTCTCTC-TTCTTCTTTCTCTACCC  98

seq1  ATCCAAA-TAGATGG-CACAGATCAACTTTAATTTTATAATTCATGATTG  146
      ||||||| ||||||| |||||||| |||||||||||||||||||||||||
seq2  ATCCAAATTAGATGGCCACAGATC-ACTTTAATTTTATAATTCATGATTG  147

seq1  T-CCATAAATTTAAAATATACATGCAAGTATTTCTAAAACTTATTTGTCT  195
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATAAATTTAAAATATACATGCAAGTATTTCTAAAACTTATTTGTCT  197

seq1  ATACTGTATATATATATATATATAT-AAATAATTATAATATATTTTCATA  244
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATACTGTATATATATATATATATATAAAATAATTATAATATATTTTCATA  247

seq1  TATGCAATAAACATATTCATTACAAATATGCATAGCTTTATATAGAGAGA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAATAAACATATTCATTACAAATATGCATAGCTTTATATAGAGAGA  297

seq1  AATTAATATTCTGTGTCATTCCTAATTTATCACTGGGAGAACATTAGCTT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATATTCTGTGTCATTCCTAATTTATCACTGGGAGAACATTAGCTT  347

seq1  ACTTTCCAAAGTATACTTTATTCCGTTCACTTGAAACAGTTCTTAATTTA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCAAAGTATACTTTATTCCGTTCACTTGAAACAGTTCTTAATTTA  397

seq1  AAACATTTCCCTTATTATTTAGGGGAGAAAATATGCTGAAATTGAAACGT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTTCCCTTATTATTTAGGGGAGAAAATATGCTGAAATTGAAACGT  447

seq1  GCATGTATATGTCTTGAATCATTCATTATGTACACTTGTAGTACTTAACC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTATATGTCTTGAATCATTCATTATGTACACTTGTAGTACTTAACC  497

seq1  ATCATTTTAACTATATGGAAATGTCTCATCACACAGAGACTGTACACTAT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTAACTATATGGAAATGTCTCATCACACAGAGACTGTACACTAT  547

seq1  CACAAACACAAGAATGCATGTGTCTGTTAAATCTAAATCTACTTTGAGAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACACAAGAATGCATGTGTCTGTTAAATCTAAATCTACTTTGAGAG  597

seq1  TTTTATAATACTTTTTACTCTTTAATTTCATAAATAGGTTGTAAAATATC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAATACTTTTTACTCTTTAATTTCATAAATAGGTTGTAAAATATC  647

seq1  ACAATACTAAGGGTGGCTGATAATGACACTAAAAATAATCTTTGGTAAAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATACTAAGGGTGGCTGATAATGACACTAAAAATAATCTTTGGTAAAG  697

seq1  CAAAATGTAAAATGATTTATAATAACCCATTGACCCACCTCTGGTACAAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGTAAAATGATTTATAATAACCCATTGACCCACCTCTGGTACAAA  747

seq1  AGGGGGACAAATGGTCTTAATGTTTGGGAGCTGAGATCATATTCTCAGAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGACAAATGGTCTTAATGTTTGGGAGCTGAGATCATATTCTCAGAT  797

seq1  ATATTTACTGTATTGCATGAAAATCAGGCAGCATAATTTCCGGCTGCTAT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTACTGTATTGCATGAAAATCAGGCAGCATAATTTCCGGCTGCTAT  847

seq1  AACAGAGGGCTCTGGAAATGACTTGACTTCCTCCCAAGGCTCTTTGCCAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGGGCTCTGGAAATGACTTGACTTCCTCCCAAGGCTCTTTGCCAA  897

seq1  CTTCCCATTATGTGGGGTGTATAATACTAACGAGACTCTGCCATTCTATT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCATTATGTGGGGTGTATAATACTAACGAGACTCTGCCATTCTATT  947

seq1  GCTTCTTAGTTGTTCCAAAACATAGCTTTATCTCTTCTCAAATAAGTTGT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTTAGTTGTTCCAAAACATAGCTTTATCTCTTCTCAAATAAGTTGT  997

seq1  CATTCCATTTGAATCCAAAAAGTTGATATAATCATAATAATAGGTAGGAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCATTTGAATCCAAAAAGTTGATATAATCATAATAATAGGTAGGAA  1047

seq1  AAATGGAAGTGAATTC  1060
      ||||||||||||||||
seq2  AAATGGAAGTGAATTC  1063

seq1: chr7_98699100_98700220
seq2: B6Ng01-007K17.g_71_1183

seq1  GAATTCTCCTTCCACTAGCTATAGACCAAATTATGTCCTCTTCAAAGTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTCCACTAGCTATAGACCAAATTATGTCCTCTTCAAAGTCC  50

seq1  TAGTCCATAGTGTGACTTAATTTAAAGATAGATCTTTTAGGAAATAATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCATAGTGTGACTTAATTTAAAGATAGATCTTTTAGGAAATAATTC  100

seq1  TTTTAAATTACATTAAAATGATAGAGTCCCCATCAGTAGGATTAGTTGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATTACATTAAAATGATAGAGTCCCCATCAGTAGGATTAGTTGCC  150

seq1  ATATAAGAGGAGGAATGGGAAATTGTATTGCTTCTCCTGACCCCTAGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGAGGAGGAATGGGAAATTGTATTGCTTCTCCTGACCCCTAGTAC  200

seq1  TGACCCTCATTTTCTCTCAGTGGCTCGGGATACACACAAAAAAGGCTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCTCATTTTCTCTCAGTGGCTCGGGATACACACAAAAAAGGCTACA  250

seq1  ATGAAGGAATGAATGGTCACAAGAACCCAAAGATTATTGAAACTCTGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGGAATGAATGGTCACAAGAACCCAAAGATTATTGAAACTCTGACT  300

seq1  TTGGACTTCCTGATCTTCAATACAGTGCAAACTTACTTTCTGCTCTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACTTCCTGATCTTCAATACAGTGCAAACTTACTTTCTGCTCTTTGA  350

seq1  GCTGCTGAATCTCTGATACTTTGTTTTAGCAGAAGAAGAAAGCTGAATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGAATCTCTGATACTTTGTTTTAGCAGAAGAAGAAAGCTGAATTA  400

seq1  CAACCTCCTACCGTAATGGCCATATAGGATACTTTGAAATAAGGAGTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTCCTACCGTAATGGCCATATAGGATACTTTGAAATAAGGAGTAGT  450

seq1  TTTCTGGTGCCAAACATGGGTCTCATCATCAAGGATGAATAGGTAGGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGTGCCAAACATGGGTCTCATCATCAAGGATGAATAGGTAGGTTA  500

seq1  GCTGAGTGTTGCTATGAATACAAAGTAAATAAGCTATGGAACCCACACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTGTTGCTATGAATACAAAGTAAATAAGCTATGGAACCCACACAA  550

seq1  CCTCAACAGATCAATCTCATCTGATCTTTTGAAGAAACAAGAAAGGCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAACAGATCAATCTCATCTGATCTTTTGAAGAAACAAGAAAGGCTGT  600

seq1  TAAAAATAGATAGTAATCAAAAAAGAAAATAGATAGCTGCTGGTTTTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATAGATAGTAATCAAAAAAGAAAATAGATAGCTGCTGGTTTTGGA  650

seq1  GGGTCAGTTTATTTGACTGTATATTCTTTTGTCAAACTCATAGGACAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCAGTTTATTTGACTGTATATTCTTTTGTCAAACTCATAGGACAAGA  700

seq1  GAATGAATGCTAACTATTCATCCAGCAAACTCTATATAAACTTTTAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAATGCTAACTATTCATCCAGCAAACTCTATATAAACTTTTAAAAA  750

seq1  GCACTCATTAAATCTTGCCTTTCCTTTCCATCTCTACTTGTTACTATTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCATTAAATCTTGCCTTTCCTTTCCATCTCTACTTGTTACTATTCA  800

seq1  ACCATGTTAGTAGGCTTCCCATCTGTCTTTGTTTCTTTTTCTGTTGCTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTTAGTAGGCTTCCCATCTGTCTTTGTTTCTTTTTCTGTTGCTGT  850

seq1  GATAAAATACCATGATTAGAAGAACTCAGTGGAAATAAAGTTTCTTTCTC  900
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GATAAAATACCATGATTAGAAGGACTCAGTGGAAATAAAGTTTCTTTCTC  900

seq1  CTCACTTTTGAAGGGTGTAGTCTGTCATAGTGGAGAACTCAGAGTGGCAG  950
      ||||||||   |||||||||||||||||||||||| ||||||||||||||
seq2  CTCACTTT--GAGGGTGTAGTCTGTCATAGTGGAG-ACTCAGAGTGGCAG  947

seq1  GTTGACGAAGCTAGTCACATCACAGCCACCATCAGGAATGAAGGTGAAGC  1000
      |||||||||||||||||||||||||||| |||||||| || ||  || ||
seq2  GTTGACGAAGCTAGTCACATCACAGCCA-CATCAGGATTG-AGTGGAGGC  995

seq1  AGGAGC-TCCCCTGCTTGGCTCCTTTTGCCTACTTATATAATGCCAGATC  1049
      |||||| |||||||||||||| |||||| |||||||  ||||||| ||||
seq2  AGGAGCTTCCCCTGCTTGGCT-CTTTTGGCTACTTAATTAATGCC-GATC  1043

seq1  CCAGCCAGGAATGGTGGGGCCAAAGTGAGTGGGCATTCAGGCATGCCC-A  1098
      ||||||||| ||||||||||  ||| ||| | |||||||||||||||| |
seq2  CCAGCCAGGGATGGTGGGGC--AAGGGAG-GTGCATTCAGGCATGCCCGA  1090

seq1  GTGTCCTGTTTCCCACATGATTC  1121
        ||||||||| || ||||||||
seq2  TGGTCCTGTTTTCCCCATGATTC  1113