BAC Information

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BAC

Clone NameB6Ng01-007P13
Chromosome7 (Build37)
Map Location 35,556,640 - 35,557,474
singlet/doubletsinglet
Overlap geneChst8
Upstream geneLOC627079, LOC635803, Abpg, LOC100043864, LOC100043865, Abpb, Abpa, LOC100043866, LOC100043867, LOC100043868, Wtip, Sae2, LOC100043410, Pdcd2l, Gpi1, 4931406P16Rik, EG619734, Lsm14a, LOC668460, LOC668464, Kctd15
Downstream genePepd, Cebpg, Cebpa, Slc7a10, Wdr88, Gpatch1, Rhpn2, C230052I12Rik, Ccdc123, Slc7a9, 2410004F06Rik, Nudt19, Rgs9bp, Ankrd27, Pdcd5, Dpy19l3, zfp507
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007P13.bB6Ng01-007P13.g
ACCDH844388DH844389
length835698
definitionDH844388|Mus musculus domesticus DNA, BAC clone: B6Ng01-007P13, 5' end.DH844389|Mus musculus domesticus DNA, BAC clone: B6Ng01-007P13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggaagtttgtttgtgtggtgtctccagtgtttaacttccatga
tctttaaggcagtctgccggctaagttatagctgggattctgagggcctg
tgaggctgcagaggcagagacccacatgctgatgactgcatggcaggcaa
cccaactcagatgcattcggctatcccagcccgctttagttaagagtttt
attgctgtgaagagatgccatgactgtggcaactcttataaggaaacact
tgactgggtcaggcttgcagttcagaagttcagtccattatcatcatggc
agcagacatggtggcacacaggcagacatggtgctggagaaggagctgag
agttctgcatctgggtcagcaggcaggaagagagtgagacactgggtctg
gcttgaacatctgagacctcaaagtccacacatcagtgacacacttcctc
caacaaggccacgcccacctcctaatagtgctactccctacaggcccatg
ggagccatttcattcagaccatcacagaacccagtagagatcaatgcttg
ccccgttgcgtatccctctggcttgcctcaaaggtcctcaatagtgtcct
caatttcatatgccagcagcaacactcttgcttttgatttctttgtcact
tttagggacatgtgaagatgacgcagaggctcctgttatggaggggaagc
aaagtccttgtaatccttgaaggcacagatcctcaccttctcggaagaac
tccatgaaacgcacactaagaactgccacattacacagataaccctgaga
tgttgttattattaattattattattattacattt
gaattcacagagatctgcctgcttcccaaaaactggaaccatacctggct
cccaactactttctgattagatttgaggcctcttccacagagggggaatt
cttgcttgtcactggacacttggtaagaagcccatgtctggggacatcat
aggctgtaaggggacctattgttgttgttttgtcaaatagatgtgtggtc
aaactgctgtttaaagtatgtttattcatgtccagagataatgatgctct
ctggtaataaatacagagattcataacaggtcaaagtactgagattaaat
gactgttgtggcttaaccctaaaaggaacctgtatcaccccctaaagctt
gggaaatgttgtggaagagtggactgaagactgtgagggctggagggtgg
gaagaggggcctccaacaatgtttttcacacatgaaatggacattaccct
ctgttggtaaaccaacgcatcgatcaggcataccgatcaggccgatcccg
ggtttcggcaccagatgacccacgctaccttctcgccagcaaaacgcacg
caggccactcggatccttctgcagtacagctttaatacatctcgagagat
agatgatcagcttcaggagaggagacccagagagcagaaaaccctttccc
ttttataggctgcgaaaaaacggttgggagatgtgcaccactgggatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_35556640_35557474
seq2: B6Ng01-007P13.b_43_877 (reverse)

seq1  AAATGTAATAATAATAATAATTAATAATAACAACATCTCAGGGTTATCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAATAATAATAATAATTAATAATAACAACATCTCAGGGTTATCTG  50

seq1  TGTAATGTGGCAGTTCTTAGTGTGCGTTTCATGGAGTTCTTCCGAGAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATGTGGCAGTTCTTAGTGTGCGTTTCATGGAGTTCTTCCGAGAAGG  100

seq1  TGAGGATCTGTGCCTTCAAGGATTACAAGGACTTTGCTTCCCCTCCATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGATCTGTGCCTTCAAGGATTACAAGGACTTTGCTTCCCCTCCATAA  150

seq1  CAGGAGCCTCCTGCGTCATCTTCACATGTCCCTAAAAGTGACAAAGAAAT  200
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCCT-CTGCGTCATCTTCACATGTCCCTAAAAGTGACAAAGAAAT  199

seq1  CAAAAGCAAGAGTGTTGCTGCTGGCATATG-AATTGAGGACACTATTGAG  249
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CAAAAGCAAGAGTGTTGCTGCTGGCATATGAAATTGAGGACACTATTGAG  249

seq1  GACCTTTGAGGCAAGCCAGAGGGATACGCAACGGGGCAAGCATTGATCTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTTGAGGCAAGCCAGAGGGATACGCAACGGGGCAAGCATTGATCTC  299

seq1  TACTGGGTTCTGTGATGGTCTGAATGAAATGGCTCCCATGGGCCTGTAGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGGTTCTGTGATGGTCTGAATGAAATGGCTCCCATGGGCCTGTAGG  349

seq1  GAGTAGCACTATTAGGAGGTGGGCGTGGCCTTGTTGGAGGAAGTGTGTCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGCACTATTAGGAGGTGGGCGTGGCCTTGTTGGAGGAAGTGTGTCA  399

seq1  CTGATGTGTGGACTTTGAGGTCTCAGATGTTCAAGCCAGACCCAGTGTCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGTGTGGACTTTGAGGTCTCAGATGTTCAAGCCAGACCCAGTGTCT  449

seq1  CACTCTCTTCCTGCCTGCTGACCCAGATGCAGAACTCTCAGCTCCTTCTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTCTTCCTGCCTGCTGACCCAGATGCAGAACTCTCAGCTCCTTCTC  499

seq1  CAGCACCATGTCTGCCTGTGTGCCACCATGTCTGCTGCCATGATGATAAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACCATGTCTGCCTGTGTGCCACCATGTCTGCTGCCATGATGATAAT  549

seq1  GGACTGAACTTCTGAACTGCAAGCCTGACCCAGTCAAGTGTTTCCTTATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGAACTTCTGAACTGCAAGCCTGACCCAGTCAAGTGTTTCCTTATA  599

seq1  AGAGTTGCCACAGTCATGGCATCTCTTCACAGCAATAAAACTCTTAACTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGCCACAGTCATGGCATCTCTTCACAGCAATAAAACTCTTAACTA  649

seq1  AAGCGGGCTGGGATAGCCGAATGCATCTGAGTTGGGTTGCCTGCCATGCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGGGCTGGGATAGCCGAATGCATCTGAGTTGGGTTGCCTGCCATGCA  699

seq1  GTCATCAGCATGTGGGTCTCTGCCTCTGCAGCCTCACAGGCCCTCAGAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCAGCATGTGGGTCTCTGCCTCTGCAGCCTCACAGGCCCTCAGAAT  749

seq1  CCCAGCTATAACTTAGCCGGCAGACTGCCTTAAAGATCATGGAAGTTAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCTATAACTTAGCCGGCAGACTGCCTTAAAGATCATGGAAGTTAAA  799

seq1  CACTGGAGACACCACACAAACAAACTTCCTGAATTC  835
      ||||||||||||||||||||||||||||||||||||
seq2  CACTGGAGACACCACACAAACAAACTTCCTGAATTC  835