BAC Information

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BAC

Clone NameB6Ng01-008O13
Chromosome7 (Build37)
Map Location 37,210,716 - 37,335,909
singlet/doubletdoublet
Overlap genenone
Upstream geneCcdc123, Slc7a9, 2410004F06Rik, Nudt19, Rgs9bp, Ankrd27, Pdcd5, Dpy19l3, zfp507, LOC100043872, EG668988, LOC668507
Downstream geneTshz3, LOC100043874, Zfp536
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008O13.bB6Ng01-008O13.g
ACCDH845007DH845008
length8761,042
definitionDH845007|Mus musculus domesticus DNA, BAC clone: B6Ng01-008O13, 5' end.DH845008|Mus musculus domesticus DNA, BAC clone: B6Ng01-008O13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,210,716 - 37,211,587)(37,334,863 - 37,335,909)
sequence
gaattccatctagtcaggagtggttccttcgcggtctagcttcagttcct
gcctccaggttcctgccctgaactattccctgacttccctcgatgatagg
ctctagcctgtaggctgaaataaacccattcctcctctaagttggttttt
ggtcacagtgtttactaggacagaagttgcttgtaactcacagcctggtg
acaaaatgctgggaaatgggattcctaaaggatgtgttcaacagagggga
gatgaggttccagggggtgagatggttgcagctaagatggtagagtgtag
aaggacagcaatatcctccagcccaggagataagccagggagaatatttg
aacaactatgaggtccaaaagtccatagtcttttaatggcacagttgtct
gcagactaccagggacctctaaggacagagctagggggttgaggatcatt
cccacaatgttcccaggctccatgcctgcagaggtgccctggctggtttc
atgtcaactggacacaagccagaattaatgagaggaaggagcctcaattg
agaagatgcctcataagatccaactgtaggtcattttcttagtgattgat
gtgaaagaacccaacccattgtatgtgtgcgttgtgagggagggttatcc
ttggactgctgttcctgggctttataagaaagcaggctgagcaagccatg
gagagcaagccaatgcgatctccccacaatgatctctgcatccagtcctg
ctagcaggttccggccctgcttgagttcctgtcctgacttcctccaatga
tggactgtgatgtggaagtgtaataagtttttcctctccaggttgccttt
ggtcatggcgttttctttcacagcat
gaattcattcatgggtgtattcacatcttcattgtgttgtaggaaggtgg
ttgaaatgaggaggtagcggtctccttggaggaattaggtcagcggggaa
gtggcctttgataggtgtcttgcttcagacttctcaacctccttcctttg
ctttgaggctcacagcttccctaccttgttatccttctgccacatttcta
tcttgcaaggaggctgaacacaagagggtcaccctcaaaaaactgaactc
catcaaagcatgagccaaataaactttttatcccaagccccttttcctca
gagatttggtcactgcagtgtaaaactaaccaacacacactgtgaagtcc
cattactggattgcagccctgttcctttggacggctcctgtaaatccttc
tttttctagttcttgcatgtcccgaagccaaagcgtggcagcccagggtc
agggctctgtcatacaagcaagcctgccttccacccacatcaccacagaa
caggcttaacaaatgctactgtgtgttcctcttgggattccccaaccgta
cagcctgccttccctggcacacaggcatacagatatgttccttccaccca
tgacatttccttgttcttcatattttactccaaggggcctgcctgatctt
cggcctcctcagatctgctactgtctgttaacccttgatgtgctgaatgt
cttctgtccagttaccacagcctccattgaaaacaagctccctatggaca
attgtggggtcccatgatgccctgtcttcatcagtgcctggcatggcctt
ttggtacccagtagcagcatatgaatgctacagggcgtgagcagggatac
ttcggtaagaacactaaataagggcaggagagatggcttccagcttaaga
gcactgggggctcttccagactcagttccattctcaacccccagtgagtg
gtgctcatgattttttgcactccattccaggaaatgtggccccctctccc
tattctgaattcttgcagactcaggaactattggggcatgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_37210716_37211587
seq2: B6Ng01-008O13.b_46_920

seq1  GAATTCCATCTAGTCAGGAGTGGTTCCTTCGCGGTCTAGCTTCAGTTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCTAGTCAGGAGTGGTTCCTTCGCGGTCTAGCTTCAGTTCCT  50

seq1  GCCTCCAGGTTCCTGCCCTGAACTATTCCCTGACTTCCCTCGATGATAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCAGGTTCCTGCCCTGAACTATTCCCTGACTTCCCTCGATGATAGG  100

seq1  CTCTAGCCTGTAGGCTGAAATAAACCCATTCCTCCTCTAAGTTGGTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGCCTGTAGGCTGAAATAAACCCATTCCTCCTCTAAGTTGGTTTTT  150

seq1  GGTCACAGTGTTTACTAGGACAGAAGTTGCTTGTAACTCACAGCCTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACAGTGTTTACTAGGACAGAAGTTGCTTGTAACTCACAGCCTGGTG  200

seq1  ACAAAATGCTGGGAAATGGGATTCCTAAAGGATGTGTTCAACAGAGGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATGCTGGGAAATGGGATTCCTAAAGGATGTGTTCAACAGAGGGGA  250

seq1  GATGAGGTTCCAGGGGGTGAGATGGTTGCAGCTAAGATGGTAGAGTGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGGTTCCAGGGGGTGAGATGGTTGCAGCTAAGATGGTAGAGTGTAG  300

seq1  AAGGACAGCAATATCCTCCAGCCCAGGAGATAAGCCAGGGAGAATATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACAGCAATATCCTCCAGCCCAGGAGATAAGCCAGGGAGAATATTTG  350

seq1  AACAACTATGAGGTCCAAAAGTCCATAGTCTTTTAATGGCACAGTTGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTATGAGGTCCAAAAGTCCATAGTCTTTTAATGGCACAGTTGTCT  400

seq1  GCAGACTACCAGGGACCTCTAAGGACAGAGCTAGGGGGTTGAGGATCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACTACCAGGGACCTCTAAGGACAGAGCTAGGGGGTTGAGGATCATT  450

seq1  CCCACAATGTTCCCAGGCTCCATGCCTGCAGAGGTGCCCTGGCTGGTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAATGTTCCCAGGCTCCATGCCTGCAGAGGTGCCCTGGCTGGTTTC  500

seq1  ATGTCAACTGGACACAAGCCAGAATTAATGAGAGGAAGGAGCCTCAATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAACTGGACACAAGCCAGAATTAATGAGAGGAAGGAGCCTCAATTG  550

seq1  AGAAGATGCCTCATAAGATCCAACTGTAGGTCATTTTCTTAGTGATTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATGCCTCATAAGATCCAACTGTAGGTCATTTTCTTAGTGATTGAT  600

seq1  GTGAAAGAACCCAACCCATTGTATGTGTGCGTTGTGAGGGAGGGTTATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAGAACCCAACCCATTGTATGTGTGCGTTGTGAGGGAGGGTTATCC  650

seq1  TTGGACTGCTGTTCCTGGGCTTTATAAGAAAGCAGGCTGAGCAAGCCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACTGCTGTTCCTGGGCTTTATAAGAAAGCAGGCTGAGCAAGCCATG  700

seq1  GAGAGCAAGCCAATGCGATCTCCCCACAATGATCTCTGCATCCAGTCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCAAGCCAATGCGATCTCCCCACAATGATCTCTGCATCCAGTCCTG  750

seq1  CTAGCAGGTTCCGGCCCTGCTTGAGTTCCTGTCCTGACTTCCTCCAATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAGGTTCCGGCCCTGCTTGAGTTCCTGTCCTGACTTCCTCCAATGA  800

seq1  TGGACTGTGATGTGGAAGTGTAATAAGTTTTTCCTCTCCAGGTTGCC-TT  849
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGGACTGTGATGTGGAAGTGTAATAAGTTTTTCCTCTCCAGGTTGCCTTT  850

seq1  GGTCATGGCGTTT--CTTCACAGCA  872
      |||||||||||||   |||||||||
seq2  GGTCATGGCGTTTTCTTTCACAGCA  875

seq1: chr7_37334863_37335909
seq2: B6Ng01-008O13.g_71_1112 (reverse)

seq1  TGCATGCACCGTTTGTTCCTGTGTCTGC-AGAAATCAGAATAGGGTATAG  49
      ||||||| ||  | ||||||| |||||| |||| ||||||||||| | ||
seq2  TGCATGCCCCAATAGTTCCTGAGTCTGCAAGAATTCAGAATAGGG-AGAG  49

seq1  GGTGCCACATCTCCTGGAACTGGAGTTGCAGACAGTCGTGAGCAACACTC  99
      || ||||||| |||||||| ||||| |||| | | || |||||| |||||
seq2  GGGGCCACATTTCCTGGAA-TGGAG-TGCAAAAAATCATGAGCACCACTC  97

seq1  ACATGAGGGTTGAGAATGGAACCTGGGTCTGGGAAGAGCACCCAGTGCTC  149
      || || ||||||||||||||| ||| |||| |||||||| ||||||||||
seq2  AC-TGGGGGTTGAGAATGGAA-CTGAGTCT-GGAAGAGCCCCCAGTGCTC  144

seq1  TTAAGCTCGGAGCCATCTCTCCTGGCCCTACTTAGTGTTCTTACCGAAGT  199
      ||||||| | |||||||||||||| || || |||||||||||||||||||
seq2  TTAAGCTGGAAGCCATCTCTCCTGCCCTTATTTAGTGTTCTTACCGAAGT  194

seq1  ATCCTTGCCTCACGCCCTGTAGCATTCATTATGCTGCTACTGGGTACC-A  248
      |||| || |||||||||||||||||||| ||||||||||||||||||| |
seq2  ATCCCTG-CTCACGCCCTGTAGCATTCA-TATGCTGCTACTGGGTACCAA  242

seq1  AAGGCCATGCCAGGCACTGATGAAGACAGGGCATCATGGGA-CCCACAAT  297
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAGGCCATGCCAGGCACTGATGAAGACAGGGCATCATGGGACCCCACAAT  292

seq1  TGTCCATAGGGAGCTTGTTTTCAATGGAGGCTGTGGTAACTGGACAGAAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCATAGGGAGCTTGTTTTCAATGGAGGCTGTGGTAACTGGACAGAAG  342

seq1  ACATTCAGCACATCAAGGGTTAACAGACAGTAGCAGATCTGAGGAGGCCG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCAGCACATCAAGGGTTAACAGACAGTAGCAGATCTGAGGAGGCCG  392

seq1  AAGATCAGGCAGGCCCCTTGGAGTAAAATATGAAGAACAAGGAAATGTCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCAGGCAGGCCCCTTGGAGTAAAATATGAAGAACAAGGAAATGTCA  442

seq1  TGGGTGGAAGGAACATATCTGTATGCCTGTGTGCCAGGGAAGGCAGGCTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGAAGGAACATATCTGTATGCCTGTGTGCCAGGGAAGGCAGGCTG  492

seq1  TACGGTTGGGGAATCCCAAGAGGAACACACAGTAGCATTTGTTAAGCCTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGTTGGGGAATCCCAAGAGGAACACACAGTAGCATTTGTTAAGCCTG  542

seq1  TTCTGTGGTGATGTGGGTGGAAGGCAGGCTTGCTTGTATGACAGAGCCCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGGTGATGTGGGTGGAAGGCAGGCTTGCTTGTATGACAGAGCCCT  592

seq1  GACCCTGGGCTGCCACGCTTTGGCTTCGGGACATGCAAGAACTAGAAAAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTGGGCTGCCACGCTTTGGCTTCGGGACATGCAAGAACTAGAAAAA  642

seq1  GAAGGATTTACAGGAGCCGTCCAAAGGAACAGGGCTGCAATCCAGTAATG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGATTTACAGGAGCCGTCCAAAGGAACAGGGCTGCAATCCAGTAATG  692

seq1  GGACTTCACAGTGTGTGTTGGTTAGTTTTACACTGCAGTGACCAAATCTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTCACAGTGTGTGTTGGTTAGTTTTACACTGCAGTGACCAAATCTC  742

seq1  TGAGGAAAAGGGGCTTGGGATAAAAAGTTTATTTGGCTCATGCTTTGATG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAAAAGGGGCTTGGGATAAAAAGTTTATTTGGCTCATGCTTTGATG  792

seq1  GAGTTCAGTTTTTTGAGGGTGACCCTCTTGTGTTCAGCCTCCTTGCAAGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCAGTTTTTTGAGGGTGACCCTCTTGTGTTCAGCCTCCTTGCAAGA  842

seq1  TAGAAATGTGGCAGAAGGATAACAAGGTAGGGAAGCTGTGAGCCTCAAAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATGTGGCAGAAGGATAACAAGGTAGGGAAGCTGTGAGCCTCAAAG  892

seq1  CAAAGGAAGGAGGTTGAGAAGTCTGAAGCAAGACACCTATCAAAGGCCAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAAGGAGGTTGAGAAGTCTGAAGCAAGACACCTATCAAAGGCCAC  942

seq1  TTCCCCGCTGACCTAATTCCTCCAAGGAGACCGCTACCTCCTCATTTCAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCGCTGACCTAATTCCTCCAAGGAGACCGCTACCTCCTCATTTCAA  992

seq1  CCACCTTCCTACAACACAATGAAGATGTGAATACACCCATGAATGAATTC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTTCCTACAACACAATGAAGATGTGAATACACCCATGAATGAATTC  1042