BAC Information

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BAC

Clone NameB6Ng01-010I16
Chromosome7 (Build37)
Map Location 49,501,755 - 49,502,880
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668561, EG434172, LOC100039221, LOC668565, AI987944, EG269902, LOC100039375, EG628359, 2610021A01Rik, 2810426N06Rik, LOC668576, Gprc2a-rs5, LOC628372, EG668579, EG628403, EG628422, Gprc2a-rs1, EG628444, EG434174, EG637913, EG434175, LOC100039556, EG637898
Downstream geneGprc2a-rs2, LOC434177, Vmn2r-ps60, 4933421I07Rik, LOC628503, BC063263, LOC100039449, EG637776, C330019L16Rik, EG434179, EG546965, LOC546964, LOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612, LOC385199, LOC100039589, EG668620
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010I16.bB6Ng01-010I16.g
ACCDH846183DH846184
length1,1121,108
definitionDH846183|Mus musculus domesticus DNA, BAC clone: B6Ng01-010I16, 5' end.DH846184|Mus musculus domesticus DNA, BAC clone: B6Ng01-010I16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacataatacctgacacactaaattaagagaagataaattgggg
aactcccttgaaatctttggtacaagggacaactttctgaacagaacaac
aatagcctaggcactaaatcaacaactaataaatttgagctcatgtaata
taaatgcttttgctaggctaagaacattatcaataggataaaacagccac
ctggggaataagaaaggtacattcaacaaaggtctaatatccaaaattta
caaggaactcaagaaattagatgtcaacaagcgaaataagccaattaaaa
aatgggatactgagctaaacagagaatgctcaatagtgggatctcaaata
aaataataaattattggaagaaaagtgaaataaaatgttttcaaagaaat
actttttataaaatttttctgtgtctagtaatatgcaatctgatttatga
cttacatgttatatatggttgatttatctttttctgttcctattcaatat
cctagcttaattctcatcatctagttccctaaattcatttacactataca
ggaattattttcactaattctttttgatacacgaattttgtattgtgaac
atcctggccaagaactatcaatgttagtcaggtgtgttggtgcacacctt
taatcctagcacttgggaggcaggggcaggcggatttctgagtttgaggc
cagcctggtctacaaagtgagttccaggacagccagggctacacagagat
accttgtctcaaaaaaccaaaaataaataaacaaataaataaaaaataaa
aaataaaagaactagcaatgttttcactcaaatgtgtatagtttcagtag
ttcaagtacatgaagatatctctagtttatcattcaacaattcaataatg
cagttacatgacattgtttctttttcctttttgtcacagacatgatttaa
tattaatctatgtaatagtgtcaaacattctgtaatgtgtttatatgtca
tagaccacatggtctggatgtcttaatgattattatcacattcttaaatg
tttaaaatcatctgtatgggtgacatttatatggaaattctagaaaccca
tgtgttattaac
gaattctctggctttgtttcccatttttaattggggcttatttcacttga
tgtatctaacttcttgagttctttgtaaattttgaatattagacctctgt
tgaatgtacagttagtgaagatcttttcccattctctgggttgctgtttt
atcctattgatgatatccttagcctggtaaaagctttttcattacatgag
gtcaaatttattaatttattaattgttgattaattgttgatctgttcagg
aggttggctcttgtgccaatgagttcaaggcagttcaatttatcatctat
tatatttagtgtgtcaggaattatgttgagttatttaatccatttggact
tgagttacgtgcagggtgataaatatggctttatttacattcttctctat
ccacacatccagttagaccagagctgaagatgtgtccttttttccattgt
atagctttggctactttgtcaaacatcaagtgtccataggagggaaggtt
gatttttttggtgattttttttctttttctttattagatattttctttat
ttacatttcaaatgttatctcttttcctattttcccctccaaaaatcccc
tatcctctcccctcttcccctgccccccaaccttcccacttgaagtgtcc
aaaatttggtcttccttcttgagtttcacatggtttgcaaattgtatctt
gggtgctgtaacttctggcctaatatccacttatcactgagtgcatatca
tgtgagtttgactccagaaatccaaataacactattcaaatgggatgcag
ttctaaagaaagaattatcaattgaggaataccaatggctgagagcacaa
aaaagaaaaaaaattcaacatccttaatctcagggaatgcaatcaaacac
ctgagattcacttcatgccagcagatgctaagatcaaaacccagtaacag
catttgctgggcaaagatatgagaagaaggtaccactggctcatatactg
gtaggatgcaggctgtcatgactctagaaaatagttgggattctcaaaat
ggacatagtctacgtggaagatcgcagactcctgctcggcgctatgacga
cagagtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_49501755_49502880
seq2: B6Ng01-010I16.b_43_1154 (reverse)

seq1  GTTAATTTAACACATGGGTTTCTTATGAAATTTCAATAATAAATGTCACC  50
      |||||  |||||||||||||||   |  |||||| || ||||||||||||
seq2  GTTAA--TAACACATGGGTTTC---TAGAATTTCCAT-ATAAATGTCACC  44

seq1  CATACAGATGATTTTTAAACATTAAAGAATGTGATAATAATCATTAAGAC  100
      ||||||||||| ||||||||||| ||||||||||||||||||||||||||
seq2  CATACAGATGA-TTTTAAACATTTAAGAATGTGATAATAATCATTAAGAC  93

seq1  ATCAAGACCAATGT-GTCTATGACATATAAACAACATTAACAGAATGTTT  149
      ||| ||||| |||| ||||||||||||||||| ||||| |||||||||||
seq2  ATCCAGACC-ATGTGGTCTATGACATATAAAC-ACATT-ACAGAATGTTT  140

seq1  GACACTTATTACATAGATTAATATTAAATCATGTCTTGTGACAAATAGGA  199
      ||||| ||||||||||||||||||||||||||||| ||||||||| ||||
seq2  GACAC-TATTACATAGATTAATATTAAATCATGTC-TGTGACAAAAAGGA  188

seq1  AAAATGAAACAATGTCATGTAACTGCATTATTGAATTGTTGAATGATAAA  249
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAA-GAAACAATGTCATGTAACTGCATTATTGAATTGTTGAATGATAAA  237

seq1  CTAGAGATATCTTCATGTACTTGAACTACTGAAACTATACACATTTGAGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGATATCTTCATGTACTTGAACTACTGAAACTATACACATTTGAGT  287

seq1  GAAAACATTGCTAGTTCTTTTATTTTTTTATTTTTTATTTATTTGTTTAT  349
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GAAAACATTGCTAGTTCTTTTA-TTTTTTATTTTTTATTTATTTGTTTAT  336

seq1  TTATTTTTTGGTTTTTTGAGACAAGGTATCTCTGTGTAGCCCTGGCTGTC  399
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTA-TTTTTGGTTTTTTGAGACAAGGTATCTCTGTGTAGCCCTGGCTGTC  385

seq1  CTGGAACTCACTTTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCGCCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACTCACTTTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCGCCT  435

seq1  GCCCCTGCCTCCCAAGTGCTAGGATTAAAGGTGTGCACCAACACACCTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTGCCTCCCAAGTGCTAGGATTAAAGGTGTGCACCAACACACCTGA  485

seq1  CTAACATTGATAGTTCTTGGCCAGGATGTTCACAATACAAAATTCGTGTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATTGATAGTTCTTGGCCAGGATGTTCACAATACAAAATTCGTGTA  535

seq1  TCAAAAAGAATTAGTGAAAATAATTCCTGTATAGTGTAAATGAATTTAGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAAGAATTAGTGAAAATAATTCCTGTATAGTGTAAATGAATTTAGG  585

seq1  GAACTAGATGATGAGAATTAAGCTAGGATATTGAATAGGAACAGAAAAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAGATGATGAGAATTAAGCTAGGATATTGAATAGGAACAGAAAAAG  635

seq1  ATAAATCAACCATATATAACATGTAAGTCATAAATCAGATTGCATATTAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCAACCATATATAACATGTAAGTCATAAATCAGATTGCATATTAC  685

seq1  TAGACACAGAAAAATTTTATAAAAAGTATTTCTTTGAAAACATTTTATTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACAGAAAAATTTTATAAAAAGTATTTCTTTGAAAACATTTTATTT  735

seq1  CACTTTTCTTCCAATAATTTATTATTTTATTTGAGATCCCACTATTGAGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTCTTCCAATAATTTATTATTTTATTTGAGATCCCACTATTGAGC  785

seq1  ATTCTCTGTTTAGCTCAGTATCCCATTTTTTAATTGGCTTATTTCGCTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTGTTTAGCTCAGTATCCCATTTTTTAATTGGCTTATTTCGCTTG  835

seq1  TTGACATCTAATTTCTTGAGTTCCTTGTAAATTTTGGATATTAGACCTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACATCTAATTTCTTGAGTTCCTTGTAAATTTTGGATATTAGACCTTT  885

seq1  GTTGAATGTACCTTTCTTATTCCCCAGGTGGCTGTTTTATCCTATTGATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAATGTACCTTTCTTATTCCCCAGGTGGCTGTTTTATCCTATTGATA  935

seq1  ATGTTCTTAGCCTAGCAAAAGCATTTATATTACATGAGCTCAAATTTATT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTTAGCCTAGCAAAAGCATTTATATTACATGAGCTCAAATTTATT  985

seq1  AGTTGTTGATTTAGTGCCTAGGCTATTGTTGTTCTGTTCAGAAAGTTGTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTTGATTTAGTGCCTAGGCTATTGTTGTTCTGTTCAGAAAGTTGTC  1035

seq1  CCTTGTACCAAAGATTTCAAGGGAGTTCCCCAATTTATCTTCTCTTAATT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACCAAAGATTTCAAGGGAGTTCCCCAATTTATCTTCTCTTAATT  1085

seq1  TAGTGTGTCAGGTATTATGTTGAATTC  1126
      |||||||||||||||||||||||||||
seq2  TAGTGTGTCAGGTATTATGTTGAATTC  1112