BAC Information

Click to search

BAC

Clone NameB6Ng01-010K23
Chromosome7 (Build37)
Map Location 94,397,316 - 94,398,038
singlet/doubletsinglet
Overlap geneNox4
Upstream geneOlfr310, Olfr309, Olfr308, Olfr307, Olfr306-ps1, Olfr305, Olfr304, Olfr303, Olfr301, Olfr1531-ps1, Olfr300-ps1, Olfr299, Olfr298, Olfr297, Olfr296-ps1, Olfr295, Olfr294, Olfr293, Olfr292, Folh1, EG546983, Vmn2r-ps87, LOC637896, EG621430, LOC621477
Downstream geneTyr, Grm5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010K23.b
ACCDH846281
length1,029
definitionDH846281|Mus musculus domesticus DNA, BAC clone: B6Ng01-010K23, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttctttcttactttctttttgatggagtgagtgatttttt
gatctcccctctcttgattctttatatgacatggatattctgcccctatc
tgatttagaataattaaagatcctttcccagattgctggtggacttttcg
tgattgtgacagcgtcttttgccttgccaacactttgtatttccattggg
gcccaattcattgttcccgatcttacaacacaaaccccctcccttcttga
aaattctgaaacccctgtgcccatcccttctcggcttttccccactttct
cctctataagtaactgtgcctctggtgctttctaagttccttgatccaat
tagttttactatttttcggtggattacactctgatgattcacattcacct
aaacccacacgccaacaaacccctccaataattgtaggttaagaaacaca
ttaacaacaatttctctgatgatttaccaaggacgcctgtcttttcattc
tctttcttgaaaactcactactctaagtgaattaataggtgagaagattt
taaatatgaggtttattttacttgatgcataacacactcggtgaacaact
tgtaagaaatcacgtgagatttaccctggcagactgtgttctggatcagg
gtgcttatgtaactatcccaatctaagaattataaaagccataactccac
tttggagttttactcttaaaataatagaaacgattcctttctaagggagc
taagctaattttgcttgactccaacagggtgggtttcatgtactttggat
gctgtgtaatttgttgttgacaatcagctaagattaagctcgtgtgtact
tgcccgtacatacgggaacagatatagtcaaacccattttaaagacactt
caaatatgctccatgtttctactgtaatctacgtagtgctctgctcagtg
atgtaagaacacgagtctaagaactgtgcatcatgaatggattgcccgtg
atgaaagctcagatgggtgaagaggaaaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_94397316_94398038
seq2: B6Ng01-010K23.b_366_1069

seq1  TGCTTTCTAAATAGTCCCAGA--GAATAAAGTATTTACTATTTTTCAAGT  48
      |||||||||| |  |||  ||   |||  ||| |||||||||||||  ||
seq2  TGCTTTCTAAGT--TCCTTGATCCAAT-TAGT-TTTACTATTTTTC-GGT  45

seq1  GCCTTACACTCTGATGCAAAACAGCAACCAAAACCCACAAGCAAACAAAC  98
      |  |||||||||||||    |||   ||| ||||||||| || |||||||
seq2  GGATTACACTCTGATGATTCACATTCACCTAAACCCACACGCCAACAAAC  95

seq1  CAATCAAATAATTGTAGGTTAATAAACACATTAAGAAGAATTTCTCTGAT  148
      |  || |||||||||||||||| ||||||||||| || ||||||||||||
seq2  CCCTCCAATAATTGTAGGTTAAGAAACACATTAACAACAATTTCTCTGAT  145

seq1  GAGTTACCAAGGACGCCTAGCTTTTCATTCTCTTTCTTGAAAACTCACTA  198
      || |||||||||||||||  ||||||||||||||||||||||||||||||
seq2  GATTTACCAAGGACGCCTGTCTTTTCATTCTCTTTCTTGAAAACTCACTA  195

seq1  CTCAAAGTGAATTAATAAGTGAGAAGTTTTTAAATATGAGGTTTATTTTA  248
      ||| ||||||||||||| |||||||| |||||||||||||||||||||||
seq2  CTCTAAGTGAATTAATAGGTGAGAAGATTTTAAATATGAGGTTTATTTTA  245

seq1  CTTAATGCATAACACACTCGGTGAACAACTTGTAAGAAATCACGTGAGAA  298
      ||| ||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTTGATGCATAACACACTCGGTGAACAACTTGTAAGAAATCACGTGAGAT  295

seq1  TTACCCTGGCAGAGTTTGTTCTGGATCAGGGTGCTTATGTTACTATCCAA  348
      ||||||||||||| | |||||||||||||||||||||||| ||||||| |
seq2  TTACCCTGGCAGACTGTGTTCTGGATCAGGGTGCTTATGTAACTATCCCA  345

seq1  ATCTAAGAATTATAAAAGCCATAACTCAACTTTGGAGTTTTACTCTTAAA  398
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATCTAAGAATTATAAAAGCCATAACTCCACTTTGGAGTTTTACTCTTAAA  395

seq1  ATAATAGAAACGTTTCCTTTCTAAAGGGAGCTAAGCTAATTTTGCTTGAC  448
      |||||||||||| ||||||||| |||||||||||||||||||||||||||
seq2  ATAATAGAAACGATTCCTTTCT-AAGGGAGCTAAGCTAATTTTGCTTGAC  444

seq1  TCCAACAGGGTGGGTTTCATGTAC-TTGGATGCTGTGTAATTTGTTGTTG  497
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCCAACAGGGTGGGTTTCATGTACTTTGGATGCTGTGTAATTTGTTGTTG  494

seq1  ACAAATCAGCTAAGATTAAGCTCGTGTGTACTTGCCCGTACATACAGGAA  547
      || |||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AC-AATCAGCTAAGATTAAGCTCGTGTGTACTTGCCCGTACATACGGGAA  543

seq1  CAGATATAGTCAAACCCATTTTAAAGACACTTCAAAATATGCTCCATGTT  597
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CAGATATAGTCAAACCCATTTTAAAGACACTTC-AAATATGCTCCATGTT  592

seq1  TCTACTGTTATTCTACGTTAGTGCTTTTGCTCAAGTGATGTTATAGAACA  647
      ||||||| || |||||| |||||| | ||||| ||||||||   ||||||
seq2  TCTACTG-TAATCTACG-TAGTGC-TCTGCTC-AGTGATGT--AAGAACA  636

seq1  GAGATGTCTAAGAACTGTGCATTCATGACAGGGATTGGCCACGTGAATGA  697
        || |||||||||||||||| |||||| | ||||||  | |||| ||| 
seq2  -CGA-GTCTAAGAACTGTGCA-TCATGA-ATGGATTG--CCCGTG-ATG-  678

seq1  AAAGCTCAGATGGGTGATGAGGAAAA  723
      ||||||||||||||||| ||||||||
seq2  AAAGCTCAGATGGGTGAAGAGGAAAA  704