BAC Information

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BAC

Clone NameB6Ng01-010M17
Chromosome7 (Build37)
Map Location 67,535,898 - 67,694,953
singlet/doubletdoublet
Overlap genenone
Upstream geneUbe3a, LOC100040985, LOC100041010, LOC100041029, LOC100041051, Pwcr1, LOC664788, Snrpn, Snurf, EG664849
Downstream geneLOC100041201, LOC100041211, LOC664896, LOC100041229, LOC625287, D0Kist2, LOC100041248, LOC100041259, EG664943, B230209E15Rik, EG620934
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010M17.bB6Ng01-010M17.g
ACCDH846360DH846361
length1,114506
definitionDH846360|Mus musculus domesticus DNA, BAC clone: B6Ng01-010M17, 5' end.DH846361|Mus musculus domesticus DNA, BAC clone: B6Ng01-010M17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,693,834 - 67,694,953)(67,535,898 - 67,536,409)
sequence
gaattctaaagactggcaatgactacaaggtagatgagtacaaagaacaa
gggaggggtaatcctagactctacctcttgcttgtgggaaagaacacaca
ttaagaggtcaaggtcccacatgttctacagcaatatccaggggatcaaa
ataatagctgtctcccaaagttggtccatgttatgagttttaaccttgag
atcacatgtaaccagaagggtttggagtgccctatctgaggttttgtcag
ttgctgatcattgataccatcacttgggagattagctcctatgccaggtt
ctgggatcaatccaagctaaaagtataaatgagcagctcatcaagacaag
tagacaaagacaaagaaggaagacaagattgccagtgtatgctcacccag
aagaacaaagacaaaattagaataatgaccaccacacactcatcctctaa
ccaataccaaaagtgaagttatgaaagtcatctgtcttgtccttgtaaag
tttcaccagcaaaacacactcggacaaccagatccttctatggaaaagct
ttattgtttaattctcaggaagaccccgaacccggaaaatggtgctgctt
aaatacccctcggtgtgacgtgtcagctcctgattaactgctcattatca
gcccagatgacgccatgggacaggcagggcacaaggaatggaaaaatacc
acagcacatgcgcagactatttgtttaccagttagaacaccggatatcag
caccatcttgtaatggcgattgcaagggcggctcctcacacatctggatt
aacagacaaaaaggacaacagaaatgaggtctgtatgcttacgttcatgg
gatcaacaacataaaacactaaagggggcaactcatcaaagaagtaacaa
aatggggcaagacagaagtgccacgagaagaagagaaaatctggttaaac
tgtaagcactgtccatacaacaagaggaaaaaaagagaagatcccagaaa
aggacgtttggaagcagaataaaacgaagtcatctttagaaccacgttgg
atgcagaatgctgctgtgctctagacctctgcttgccaaccatacttgtc
ttaggtagagtgac
attagctaatcgatttcggattttatcaaaacttgaaaactgaagatgaa
tccggaatcacacagtgcccctgtgacaacaggaagttaagtcagtctga
cagtgcatctctgtttgtggctcggagaaaccctcaaagaagagaatatt
tggtcccctgggcttcttttttttttaaagtttttattggtttatttaca
tttcaaatgttgtccctctcctaggtttcctctccgcaaacctccctttc
cccctgcatctcagtcccctctgcatctatgaagttgctctcccacggac
ccaccgactctcctgcttcaccccgagcctttccctactctgcgttatca
agcctgtctttcctccgcaggctcgtcgcatccactgcgcaggtttttga
cgcatttcctgctgtggctggtcttgcggagaggagactaaagcggccac
agcgaccgcagcgactgcggcggcggcggcggcggtgggagggggctggg
gggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_67693834_67694953
seq2: B6Ng01-010M17.b_47_1160 (reverse)

seq1  GTCACCTCTAACCCCTAAGGACAAGTATGGTTGGCAAGCAGAAGGTCTAG  50
      |||| |||||   ||||| |||||||||||||||||||||| ||||||||
seq2  GTCA-CTCTA---CCTAA-GACAAGTATGGTTGGCAAGCAG-AGGTCTAG  44

seq1  AGCACAGGCAGCATCTGGCATCCAACGTGG-TCTATAGATGACTTCGTTG  99
      |||||| |||||||   ||||||||||||| |||| ||||||||||||| 
seq2  AGCACA-GCAGCATTCTGCATCCAACGTGGTTCTAAAGATGACTTCGTTT  93

seq1  TATTCTGCTTCCAAACGTCCTTTTCTGGGATCTCTCTTTTTTTTCCCTCT  149
      ||||||||||||||||||||||||||||||||| ||| |||||| |||||
seq2  TATTCTGCTTCCAAACGTCCTTTTCTGGGATCT-TCTCTTTTTTTCCTCT  142

seq1  TGTTGTATGGACAGTGCTTACAGTTTAACCAGATTTTCTCTTCTTCTCGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTATGGACAGTGCTTACAGTTTAACCAGATTTTCTCTTCTTCTCGT  192

seq1  GGCACTTCTGTCTTGCCCCCTTTTGTTACTTCTTTGATGAGTTGCCCCC-  248
      ||||||||||||||||||| ||||||||||||||||||||||||||||| 
seq2  GGCACTTCTGTCTTGCCCCATTTTGTTACTTCTTTGATGAGTTGCCCCCT  242

seq1  TTAGTGTTTTATGTTGTTGATCCCATGAACGTAAGCATACAGACCTCATT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTTTTATGTTGTTGATCCCATGAACGTAAGCATACAGACCTCATT  292

seq1  TCTGTTGTCCTTTTTGTCTGTTAATCCAGATGTGTGAGGAGCCGCCCTTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGTCCTTTTTGTCTGTTAATCCAGATGTGTGAGGAGCCGCCCTTG  342

seq1  CAATCGCCATTACAAGATGGTGCTGATATCCGGTGTTCTAACTGGTAAAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCGCCATTACAAGATGGTGCTGATATCCGGTGTTCTAACTGGTAAAC  392

seq1  AAATAGTCTGCGCATGTGCTGTGGTATTTTTCCATTCCTTGTGCCCTGCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTCTGCGCATGTGCTGTGGTATTTTTCCATTCCTTGTGCCCTGCC  442

seq1  TGTCCCATGGCGTCATCTGGGCTGATAATGAGCAGTTAATCAGGAGCTGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCATGGCGTCATCTGGGCTGATAATGAGCAGTTAATCAGGAGCTGA  492

seq1  CACGTCACACCGAGGGGTATTTAAGCAGCACCATTTTCCGGGTTCGGGGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTCACACCGAGGGGTATTTAAGCAGCACCATTTTCCGGGTTCGGGGT  542

seq1  CTTCCTGAGAATTAAACAATAAAGCTTTTCCATAGAAGGATCTGGTTGTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGAGAATTAAACAATAAAGCTTTTCCATAGAAGGATCTGGTTGTC  592

seq1  CGAGTGTGTTTTGCTGGTGAAACTTTACAAGGACAAGACAGATGACTTTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTGTGTTTTGCTGGTGAAACTTTACAAGGACAAGACAGATGACTTTC  642

seq1  ATAACTTCACTTTTGGTATTGGTTAGAGGATGAGTGTGTGGTGGTCATTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTTCACTTTTGGTATTGGTTAGAGGATGAGTGTGTGGTGGTCATTA  692

seq1  TTCTAATTTTGTCTTTGTTCTTCTGGGTGAGCATACACTGGCAATCTTGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATTTTGTCTTTGTTCTTCTGGGTGAGCATACACTGGCAATCTTGT  742

seq1  CTTCCTTCTTTGTCTTTGTCTACTTGTCTTGATGAGCTGCTCATTTATAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCTTTGTCTTTGTCTACTTGTCTTGATGAGCTGCTCATTTATAC  792

seq1  TTTTAGCTTGGATTGATCCCAGAACCTGGCATAGGAGCTAATCTCCCAAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGCTTGGATTGATCCCAGAACCTGGCATAGGAGCTAATCTCCCAAG  842

seq1  TGATGGTATCAATGATCAGCAACTGACAAAACCTCAGATAGGGCACTCCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGTATCAATGATCAGCAACTGACAAAACCTCAGATAGGGCACTCCA  892

seq1  AACCCTTCTGGTTACATGTGATCTCAAGGTTAAAACTCATAACATGGACC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTTCTGGTTACATGTGATCTCAAGGTTAAAACTCATAACATGGACC  942

seq1  AACTTTGGGAGACAGCTATTATTTTGATCCCCTGGATATTGCTGTAGAAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTGGGAGACAGCTATTATTTTGATCCCCTGGATATTGCTGTAGAAC  992

seq1  ATGTGGGACCTTGACCTCTTAATGTGTGTTCTTTCCCACAAGCAAGAGGT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGGACCTTGACCTCTTAATGTGTGTTCTTTCCCACAAGCAAGAGGT  1042

seq1  AGAGTCTAGGATTACCCCTCCCTTGTTCTTTGTACTCATCTACCTTGTAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTAGGATTACCCCTCCCTTGTTCTTTGTACTCATCTACCTTGTAG  1092

seq1  TCATTGCCAGTCTTTAGAATTC  1120
      ||||||||||||||||||||||
seq2  TCATTGCCAGTCTTTAGAATTC  1114

seq1: chr7_67535898_67536409
seq2: B6Ng01-010M17.g_66_577

seq1  GAATTCATTAGCTAATCGATTTCGGATTTTATCAAAACTTGAAAACTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAGCTAATCGATTTCGGATTTTATCAAAACTTGAAAACTGAA  50

seq1  GATGAATCCGGAATCACACAGTGCCCCTGTGACAACAGGAAGTTAAGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAATCCGGAATCACACAGTGCCCCTGTGACAACAGGAAGTTAAGTCA  100

seq1  GTCTGACAGTGCATCTCTGTTTGTGGCTCGGAGAAACCCTCAAAGAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGACAGTGCATCTCTGTTTGTGGCTCGGAGAAACCCTCAAAGAAGAG  150

seq1  AATATTTGGTCCCCTGGGCTTCTTTTTTTTTTAAAGTTTTTATTGGTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTGGTCCCCTGGGCTTCTTTTTTTTTTAAAGTTTTTATTGGTTTA  200

seq1  TTTACATTTCAAATGTTGTCCCTCTCCTAGGTTTCCTCTCCGCAAACCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATTTCAAATGTTGTCCCTCTCCTAGGTTTCCTCTCCGCAAACCTC  250

seq1  CCTTTCCCCCTGCATCTCAGTCCCCTCTGCATCTATGAAGTTGCTCTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCCCCTGCATCTCAGTCCCCTCTGCATCTATGAAGTTGCTCTCCC  300

seq1  ACGGACCCACCGACTCTCCTGCTTCACCCCGAGCCTTTCCCTACTCTGCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGACCCACCGACTCTCCTGCTTCACCCCGAGCCTTTCCCTACTCTGCG  350

seq1  TTATCAAGCCTGTCTTTCCTCCGCAGGCTCGTCGCATCCACTGCGCAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAAGCCTGTCTTTCCTCCGCAGGCTCGTCGCATCCACTGCGCAGGT  400

seq1  TTTTGACGCATTTCCTGCTGTGGCTGGTCTTGCGGAGAGGAGACTAAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGACGCATTTCCTGCTGTGGCTGGTCTTGCGGAGAGGAGACTAAAGC  450

seq1  GGCCACAGCGACCGCAGCGACTGCGGCGGCGGCGGCGGCGGTGGGAGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACAGCGACCGCAGCGACTGCGGCGGCGGCGGCGGCGGTGGGAGGGG  500

seq1  GCTGGGGGGTGG  512
      ||||||||||||
seq2  GCTGGGGGGTGG  512