BAC Information

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BAC

Clone NameB6Ng01-012D11
Chromosome7 (Build37)
Map Location 151,919,418 - 152,008,461
singlet/doubletdoublet
Overlap geneTmem16a, LOC669079, LOC677315
Upstream geneOsbpl5, Mrgprg, Mrgpre, Nadsyn1, Dhcr7, Gm498, Shank2, Cttn, Ppfia1, Fadd
Downstream geneFgf3, Fgf4, Fgf15, Oraov1, Ccnd1, 1810010D01Rik, LOC100040049, Tpcn2, Mrgprf, Mrgprd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012D11.bB6Ng01-012D11.g
ACCDH847368DH847369
length1,109907
definitionDH847368|Mus musculus domesticus DNA, BAC clone: B6Ng01-012D11, 5' end.DH847369|Mus musculus domesticus DNA, BAC clone: B6Ng01-012D11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,919,418 - 151,920,531)(152,007,549 - 152,008,461)
sequence
gaattctgtatgcatttgcagagctggaagacagttttctctacttcact
ataatacagtagggaaacctgccacgtacacagggcatcagcttctgtcc
acatccggtggtcacctggagactagggggataaggtttgctggggtgct
gtctgcaccagcctcctcactgctggagaagacagagcatgggctgctgt
caagccagccagacacatcctcagtgtctctggcctcccaggaagtgtcc
acagagcacctagacacctagactaataaactgcacatgctcatcaaaag
ttgagggtcagctttggtgactgatactgttggtaatatgctgaaaagca
aacccccaaagggtggcacatctgacagacagtacctcgatgactagata
gtcacacaggaaagatgatactgagccctttccataccccatatataaac
attaactcaacctggatcaatgatctaaatataagacaaaacccacaaaa
ctcttatggctgggatgagtctgtgaccttgcaaccagcagtaggttctt
agagctgatgccaatgacaccagcagagaaagagaaagagagagagagag
agagagagagagagagagagagagagagagagagagagagagagagaggc
taaactgatgaacctaacaccatgaaagttggtttctgtgtatcacggga
tattatggagaaggggaagacataatctgtaaatatttgcaaatcacaca
atagataaaggttgatatccacactctagaaaagaacaagaagacaaaac
atttagaaagtaagcctgctctcactgtcttttgggagaccttttttcca
tagaaaggctgataggtgacagatagcctgatgatgctcagggcaaccag
ctactagacaaactcaaagcaagaccacatcacaccctttcaggattgct
tgtcttaaacaaataaaatatataaatgccaatgtgttagaagatgttgg
aacccttgtggcatctacaggatataaaataagaaaggtgctgtgaaacg
atgaggtcagtagagatggctcagtaggtaacagctttttctcacaagcc
tggcacctg
gaattctgatgacaaaggacaggccccagagccaggcttcgtacctccac
atctggttttgttagagggtctcagtgggtggatgtctataccccagatc
ccaagtcggcaaaccttggccattgatcagtgcttaaggctgaactgagg
cattgggagtcaggtggcaactgaaggggccataggaccagcactgtctc
cagaatcctcaggctctttccctccacagggccggaggggaacacctgca
ccgctgagctgggtgcacacctcattactcagagagaaaccccagtgccc
tggacttgtcagattgtgctgctgctgatgctgagacaaccgcacagcaa
aagccacggttccctgccacagactttttgtcttgttttattttgtaaat
tgcctttctgaaagcaccctggcctgctttgatgtggccttttgatagcc
taccctcatcaataggcaggccccgcccagggagccactttgaagaaggg
ttgtagtccacaggacaggctggggctgcagtctcaagcctgtggaacaa
aggtagaggagggtctcctccctccaagtccgacctcagaaccgcggtct
cagcagtcactgaatgggcgtgggtgggtggcagctaagaccagcaagtc
tgaggctcattttagggtggcacttttcagccatgagctgagaacagggc
actcggcccctgagagcctcagttactgctcttttgaatggaagtgggga
ggaatgaacaccatggtgaagaacggagtgacacccaaagcagcaagtgt
ggtgcctggtacaggagatattattcatgggctcttcaaagatggtggtg
aggacaatgtcagagcctctgttgctggtgagtggagcgttggtgaaaaa
atggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_151919418_151920531
seq2: B6Ng01-012D11.b_43_1151

seq1  GAATTCTGTATGCATTTGCAGAGCTGGAAGACAGTTTTCTCTACTTCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTATGCATTTGCAGAGCTGGAAGACAGTTTTCTCTACTTCACT  50

seq1  ATAATACAGTAGGGAAACCTGCCACGTACACAGGGCATCAGCTTCTGTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATACAGTAGGGAAACCTGCCACGTACACAGGGCATCAGCTTCTGTCC  100

seq1  ACATCCGGTGGTCACCTGGAGACTAGGGGGATAAGGTTTGCTGGGGTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCGGTGGTCACCTGGAGACTAGGGGGATAAGGTTTGCTGGGGTGCT  150

seq1  GTCTGCACCAGCCTCCTCACTGCTGGAGAAGACAGAGCATGGGCTGCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCACCAGCCTCCTCACTGCTGGAGAAGACAGAGCATGGGCTGCTGT  200

seq1  CAAGCCAGCCAGACACATCCTCAGTGTCTCTGGCCTCCCAGGAAGTGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCAGCCAGACACATCCTCAGTGTCTCTGGCCTCCCAGGAAGTGTCC  250

seq1  ACAGAGCACCTAGACACCTAGACTAATAAACTGCACATGCTCATCAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCACCTAGACACCTAGACTAATAAACTGCACATGCTCATCAAAAG  300

seq1  TTGAGGGTCAGCTTTGGTGACTGATACTGTTGGTAATATGCTGAAAAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGGTCAGCTTTGGTGACTGATACTGTTGGTAATATGCTGAAAAGCA  350

seq1  AACCCCCAAAGGGTGGCACATCTGACAGACAGTACCTCGATGACTAGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCCAAAGGGTGGCACATCTGACAGACAGTACCTCGATGACTAGATA  400

seq1  GTCACACAGGAAAGATGATACTGAGCCCTTTCCATACCCCATATATAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACACAGGAAAGATGATACTGAGCCCTTTCCATACCCCATATATAAAC  450

seq1  ATTAACTCAACCTGGATCAATGATCTAAATATAAGACAAAACCCACAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACTCAACCTGGATCAATGATCTAAATATAAGACAAAACCCACAAAA  500

seq1  CTCTTATGGCTGGGATGAGTCTGTGACCTTGCAACCAGCAGTAGGTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTATGGCTGGGATGAGTCTGTGACCTTGCAACCAGCAGTAGGTTCTT  550

seq1  AGAGCTGATGCCAATGACACCAGCAGAGAAAGAGAAAGAGAGAGAGAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGATGCCAATGACACCAGCAGAGAAAGAGAAAGAGAGAGAGAGAG  600

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGC  650

seq1  TAAACTGATGAACCTAACACCATGAAAGTTGGTTTCTGTGTATCACGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTGATGAACCTAACACCATGAAAGTTGGTTTCTGTGTATCACGGGA  700

seq1  TATTATGGAGAAGGGGAAGACATAATCTGTAAATATTTGCAAATCACACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATGGAGAAGGGGAAGACATAATCTGTAAATATTTGCAAATCACACA  750

seq1  ATAGATAAAGGTTGATATCCACACTCTAGAAAAGAACAAGAAGACAAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAAAGGTTGATATCCACACTCTAGAAAAGAACAAGAAGACAAAAC  800

seq1  ATTTAG-AAGTAAGCCTGCTCCCACTGTCTTTTGGGAGACC-TTTTTCCA  848
      |||||| |||||||||||||| ||||||||||||||||||| ||||||||
seq2  ATTTAGAAAGTAAGCCTGCTCTCACTGTCTTTTGGGAGACCTTTTTTCCA  850

seq1  TAG-AAGGCTGATAGGTGACAGATAGCCTGATGATGCTCAGGGCAACCAG  897
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGGCTGATAGGTGACAGATAGCCTGATGATGCTCAGGGCAACCAG  900

seq1  CTACTAGACAAACTCAAAGCAAGACCACATCACACCC-TTCAGGATTGC-  945
      ||||||||||||||||||||||||||||||||||||| ||||||||||| 
seq2  CTACTAGACAAACTCAAAGCAAGACCACATCACACCCTTTCAGGATTGCT  950

seq1  TGTCTTAAACAAATAAAATTATATAAATGCCAAATGTTGTTAG-AGATGT  994
      |||||||||||||||||| |||||||||||| |||| |||||| ||||||
seq2  TGTCTTAAACAAATAAAA-TATATAAATGCC-AATG-TGTTAGAAGATGT  997

seq1  TGGAACCCTTGTGCCATTCTAACAGGAATATAAAATAAGAAAGTGGCTGT  1044
      ||||||||||||| || ||| ||||| ||||||||||||||||  |||||
seq2  TGGAACCCTTGTGGCA-TCT-ACAGG-ATATAAAATAAGAAAGGTGCTGT  1044

seq1  AGAAAACGAATGAGGGCCAGT-GAGATGGCTCAGTAGGTAACAGCTTTTT  1093
         ||||| |||| || |||| ||||||||||||||||||||||| ||||
seq2  --GAAACG-ATGA-GGTCAGTAGAGATGGCTCAGTAGGTAACAGC-TTTT  1089

seq1  TCACACAAGCCTGGCAACCTG  1114
      || |||||||||||| |||||
seq2  TCTCACAAGCCTGGC-ACCTG  1109

seq1: chr7_152007549_152008461
seq2: B6Ng01-012D11.g_67_973 (reverse)

seq1  CCACCATCTTCTTCACCAACGCCTCCCACTTCACCAGCAACAGAGGCTCT  50
      ||||||| || |||||||||||   |||| ||||||||||||||||||||
seq2  CCACCAT-TTTTTCACCAACGC--TCCAC-TCACCAGCAACAGAGGCTCT  46

seq1  GACATTGTCCTCACCCACCATCTCTGAAGAGCCCATGAATAATATCTCCT  100
      ||||||||||||| ||||||||| ||||||||||||||||||||||||||
seq2  GACATTGTCCTCA-CCACCATCTTTGAAGAGCCCATGAATAATATCTCCT  95

seq1  GTACCAGGCACCACACTTGCCTGCTCTGGGTGTCACTCCGTTCTTCACCA  150
      ||||||||||||||||||| ||||| ||||||||||||||||||||||||
seq2  GTACCAGGCACCACACTTG-CTGCTTTGGGTGTCACTCCGTTCTTCACCA  144

seq1  TGGTGTTCATTCCTCCCCACTTCCATTCAAAAGAGCAGTAACTGAGGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTTCATTCCTCCCCACTTCCATTCAAAAGAGCAGTAACTGAGGCTC  194

seq1  TCAGGGGCCGAGTGCCCTGTTCTCAGCTCATGGCTGAAAAGTGCCACCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGGCCGAGTGCCCTGTTCTCAGCTCATGGCTGAAAAGTGCCACCCT  244

seq1  AAAATGAGCCTCAGACTTGCTGGTCTTAGCTGCCACCCACCCACGCCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAGCCTCAGACTTGCTGGTCTTAGCTGCCACCCACCCACGCCCAT  294

seq1  TCAGTGACTGCTGAGACCGCGGTTCTGAGGTCGGACTTGGAGGGAGGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGACTGCTGAGACCGCGGTTCTGAGGTCGGACTTGGAGGGAGGAGA  344

seq1  CCCTCCTCTACCTTTGTTCCACAGGCTTGAGACTGCAGCCCCAGCCTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCTCTACCTTTGTTCCACAGGCTTGAGACTGCAGCCCCAGCCTGTC  394

seq1  CTGTGGACTACAACCCTTCTTCAAAGTGGCTCCCTGGGCGGGGCCTGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGACTACAACCCTTCTTCAAAGTGGCTCCCTGGGCGGGGCCTGCCT  444

seq1  ATTGATGAGGGTAGGCTATCAAAAGGCCACATCAAAGCAGGCCAGGGTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATGAGGGTAGGCTATCAAAAGGCCACATCAAAGCAGGCCAGGGTGC  494

seq1  TTTCAGAAAGGCAATTTACAAAATAAAACAAGACAAAAAGTCTGTGGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGAAAGGCAATTTACAAAATAAAACAAGACAAAAAGTCTGTGGCAG  544

seq1  GGAACCGTGGCTTTTGCTGTGCGGTTGTCTCAGCATCAGCAGCAGCACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCGTGGCTTTTGCTGTGCGGTTGTCTCAGCATCAGCAGCAGCACAA  594

seq1  TCTGACAAGTCCAGGGCACTGGGGTTTCTCTCTGAGTAATGAGGTGTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACAAGTCCAGGGCACTGGGGTTTCTCTCTGAGTAATGAGGTGTGCA  644

seq1  CCCAGCTCAGCGGTGCAGGTGTTCCCCTCCGGCCCTGTGGAGGGAAAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCTCAGCGGTGCAGGTGTTCCCCTCCGGCCCTGTGGAGGGAAAGAG  694

seq1  CCTGAGGATTCTGGAGACAGTGCTGGTCCTATGGCCCCTTCAGTTGCCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGGATTCTGGAGACAGTGCTGGTCCTATGGCCCCTTCAGTTGCCAC  744

seq1  CTGACTCCCAATGCCTCAGTTCAGCCTTAAGCACTGATCAATGGCCAAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTCCCAATGCCTCAGTTCAGCCTTAAGCACTGATCAATGGCCAAGG  794

seq1  TTTGCCGACTTGGGATCTGGGGTATAGACATCCACCCACTGAGACCCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCGACTTGGGATCTGGGGTATAGACATCCACCCACTGAGACCCTCT  844

seq1  AACAAAACCAGATGTGGAGGTACGAAGCCTGGCTCTGGGGCCTGTCCTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACCAGATGTGGAGGTACGAAGCCTGGCTCTGGGGCCTGTCCTTT  894

seq1  GTCATCAGAATTC  913
      |||||||||||||
seq2  GTCATCAGAATTC  907