BAC Information

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BAC

Clone NameB6Ng01-012E07
Chromosome7 (Build37)
Map Location 77,302,487 - 77,466,565
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC384741, EG665410
Downstream geneNr2f2, LOC100042833, B130024G19Rik, LOC100042838, LOC665486, LOC100041957
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012E07.bB6Ng01-012E07.g
ACCDH847408DH847409
length1,1111,139
definitionDH847408|Mus musculus domesticus DNA, BAC clone: B6Ng01-012E07, 5' end.DH847409|Mus musculus domesticus DNA, BAC clone: B6Ng01-012E07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,465,447 - 77,466,565)(77,302,487 - 77,303,654)
sequence
gaattctgttcttgtagatgtgaaggggaagcgtctcactaggagcagag
cagtactcttatcaagaaatctgtgctaggctgcagggagtctagaaagt
caaggctgagcaccttggctgctcagttgtaaagcagcacacaaacgggt
gagtagggtgagtattgttctcagggctgggccactgtgactccattttt
tttcatattttagagatgaactagtagttgtggttttttttttcaagaaa
tctaggatacctatttctttgtgagcacatattagatgagccttacattt
gtagaagaatgggaaagaaagaagaaaatctgtgaaatggacactatgca
gtacttgagaaaggattctttgggaagaagatgtatacctgaatgccaat
aaacaaacaaacaaacaaacaaactgccaggcagtcaatatcttgtccac
tggagagtcagcctcaagctaattctaccttctgaggtgcccagcaaaat
ttcaaaccttggttcaccaatttgggttaactccagcctgacttgcgtgg
tactagaagcaaactgaatggacatgttcaaccaaacataaaggatagcc
tggacaaagaagagcagtgattcagagtcaaacttgtttcctgtacaaca
gtagtataacacatccttgaagcttttacttataaagctatcatgaaaga
aaactcagtgtatctagttattgatttattgattcaaaatagcagaatga
aatagtattcaaaagttcaagttgtaggaagaactcacccctccttgttt
tacttatttatccactgaagatcaggacatctcaggaaaatattaaaagt
caagatgaaattcgtatttcaaggctaccatgaatttgaacgtctgcaga
gtgtgggcctgtaactgggggcagagggtaaagaatctagtagcagagag
agactaattactctttttcagagaacacactcacttacatttatatacta
ttggatgggtagagatgttcatcatgatggagtatggagaggcaagggaa
gctagcattattatatatattattatatatcattaccctggtgggggagg
gactttttttt
gaattccatcagaaccagatcaggattgacaaagcaaactgaaactgaga
taagcagaactgtaaagacttccaactgagttgggggcaaggccatggag
ggagacagggtacagttcataagcctgtccatttcagtaacatactgata
aaataaatgacatcctacatacattattcctcttggaaaatatttatgat
atcgggagttatgttagtaatatcagcatttcatgattctctgataagag
acacaaaaatgtatttttatgactctcatatttttacatatagaaagtat
ctcattgccagagaggttatatattcaatttcctggagactgaaagatta
tttttgagcaaaagtcggtgaaataaatataataatgcccttaaatatgc
tagatttatttaatcaataataacataaggattatctccctaaacttgga
aattcttccataaaatctgaatccccctcattgaggtgcagcttctctga
aggcaatgggcaaagccaaatgtttgccaagtccctgtctcattgtgtcc
tgtgcacgtatgacaggttctgagcatcaattataatttaaaaactcaat
tttagcattaaaatcacaaaatgtaaatgacattattataaagaaaaata
gctgtggacaagtcagattagtttacacagatacattcttatctgatgga
agaaaaaaaacaaacctccaaaccaatccccagcatcctttaagtgaggc
ttaagagcaatattattaatcaatagcaagggaaagaggccacagcatca
tttagttccctgtggtacagaccttccctattgagcatcctttatttgcc
ccatacacaaaacaccaaagttaaaagttgacaggaattcaaataaaatg
agtctgctacaaactccacaccatatacatggagagactaattattcccc
cgcttgtttggcgtatcattagagtacatctcgtttactgttttgtatgt
gctttacatgttctcagtttgatattatctgtacaacagcagctactagg
agctgctccacagtattttataacagctggcgcattaatgaccattacaa
ggactacaggagagagctttgtgacccttctgctgtccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_77465447_77466565
seq2: B6Ng01-012E07.b_45_1155 (reverse)

seq1  AAAAAAAAGTCCCTCCCC--ACAGGTTATATTGTAATAATAATAATAATA  48
      ||||||||||||||||||   ||||       ||||| |||   ||||||
seq2  AAAAAAAAGTCCCTCCCCCACCAGG-------GTAATGATA--TATAATA  41

seq1  ATAATAATAATAATGCTATGCTT-CCTTGCCTCTCCTTACTGCATCATGA  97
      |||   |||||||||||| |||| |||||||||||| |||| ||||||||
seq2  ATATATATAATAATGCTA-GCTTCCCTTGCCTCTCCATACTCCATCATGA  90

seq1  TGGACATCTCTTACCCATCCAATAAGTATATAAATGTAAGTGAGTGTGTT  147
      || ||||||| |||||||||||| ||||||||||||||||||||||||||
seq2  TGAACATCTC-TACCCATCCAAT-AGTATATAAATGTAAGTGAGTGTGTT  138

seq1  CTCCTGAAAAAGAGTAATTAGTCTCTCTCTGCTACTAGATTC-TTACCCT  196
      || ||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CT-CTGAAAAAGAGTAATTAGTCTCTCTCTGCTACTAGATTCTTTACCCT  187

seq1  CTG-CCCCAGTTACAGGCCCACACTCTGCAGACGTTCAAATTCATGGTAG  245
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCCCAGTTACAGGCCCACACTCTGCAGACGTTCAAATTCATGGTAG  237

seq1  CCTTGAAATACGAATTTCATCTTGACTTTTAATATTTTCCTGAGATGTCC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAAATACGAATTTCATCTTGACTTTTAATATTTTCCTGAGATGTCC  287

seq1  TGATCTTCAGTGGATAAATAAGTAAAACAAGGAGGGGTGAGTTCTTCCTA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTTCAGTGGATAAATAAGTAAAACAAGGAGGGGTGAGTTCTTCCTA  337

seq1  CAACTTGAACTTTTGAATACTATTTCATTCTGCTATTTTGAATCAATAAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTGAACTTTTGAATACTATTTCATTCTGCTATTTTGAATCAATAAA  387

seq1  TCAATAACTAGATACACTGAGTTTTCTTTCATGATAGCTTTATAAGTAAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAACTAGATACACTGAGTTTTCTTTCATGATAGCTTTATAAGTAAA  437

seq1  AGCTTCAAGGATGTGTTATACTACTGTTGTACAGGAAACAAGTTTGACTC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCAAGGATGTGTTATACTACTGTTGTACAGGAAACAAGTTTGACTC  487

seq1  TGAATCACTGCTCTTCTTTGTCCAGGCTATCCTTTATGTTTGGTTGAACA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCACTGCTCTTCTTTGTCCAGGCTATCCTTTATGTTTGGTTGAACA  537

seq1  TGTCCATTCAGTTTGCTTCTAGTACCACGCAAGTCAGGCTGGAGTTAACC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCATTCAGTTTGCTTCTAGTACCACGCAAGTCAGGCTGGAGTTAACC  587

seq1  CAAATTGGTGAACCAAGGTTTGAAATTTTGCTGGGCACCTCAGAAGGTAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGGTGAACCAAGGTTTGAAATTTTGCTGGGCACCTCAGAAGGTAG  637

seq1  AATTAGCTTGAGGCTGACTCTCCAGTGGACAAGATATTGACTGCCTGGCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGCTTGAGGCTGACTCTCCAGTGGACAAGATATTGACTGCCTGGCA  687

seq1  GTTTGTTTGTTTGTTTGTTTGTTTATTGGCATTCAGGTATACATCTTCTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTGTTTGTTTGTTTGTTTATTGGCATTCAGGTATACATCTTCTT  737

seq1  CCCAAAGAATCCTTTCTCAAGTACTGCATAGTGTCCATTTCACAGATTTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAGAATCCTTTCTCAAGTACTGCATAGTGTCCATTTCACAGATTTT  787

seq1  CTTCTTTCTTTCCCATTCTTCTACAAATGTAAGGCTCATCTAATATGTGC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTCTTTCCCATTCTTCTACAAATGTAAGGCTCATCTAATATGTGC  837

seq1  TCACAAAGAAATAGGTATCCTAGATTTCTTGAAAAAAAAAACCACAACTA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAAGAAATAGGTATCCTAGATTTCTTGAAAAAAAAAACCACAACTA  887

seq1  CTAGTTCATCTCTAAAATATGAAAAAAAATGGAGTCACAGTGGCCCAGCC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTCATCTCTAAAATATGAAAAAAAATGGAGTCACAGTGGCCCAGCC  937

seq1  CTGAGAACAATACTCACCCTACTCACCCGTTTGTGTGCTGCTTTACAACT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAACAATACTCACCCTACTCACCCGTTTGTGTGCTGCTTTACAACT  987

seq1  GAGCAGCCAAGGTGCTCAGCCTTGACTTTCTAGACTCCCTGCAGCCTAGC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGCCAAGGTGCTCAGCCTTGACTTTCTAGACTCCCTGCAGCCTAGC  1037

seq1  ACAGATTTCTTGATAAGAGTACTGCTCTGCTCCTAGTGAGACGCTTCCCC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATTTCTTGATAAGAGTACTGCTCTGCTCCTAGTGAGACGCTTCCCC  1087

seq1  TTCACATCTACAAGAACAGAATTC  1119
      ||||||||||||||||||||||||
seq2  TTCACATCTACAAGAACAGAATTC  1111

seq1: chr7_77302487_77303654
seq2: B6Ng01-012E07.g_65_1203

seq1  GAATTCCATCAGAACCAGATCAGGATTGACAAAGCAAACTGAAACTGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCAGAACCAGATCAGGATTGACAAAGCAAACTGAAACTGAGA  50

seq1  TAAGCAGAACTGTAAAGACTTCCAACTGAGTTGGGGGCAAGGCCATGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAGAACTGTAAAGACTTCCAACTGAGTTGGGGGCAAGGCCATGGAG  100

seq1  GGAGACAGGGTACAGTTCATAAGCCTGTCCATTTCAGTAACATACTGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACAGGGTACAGTTCATAAGCCTGTCCATTTCAGTAACATACTGATA  150

seq1  AAATAAATGACATCCTACATACATTATTCCTCTTGGAAAATATTTATGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATGACATCCTACATACATTATTCCTCTTGGAAAATATTTATGAT  200

seq1  ATCGGGAGTTATGTTAGTAATATCAGCATTTCATGATTCTCTGATAAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGGAGTTATGTTAGTAATATCAGCATTTCATGATTCTCTGATAAGAG  250

seq1  ACACAAAAATGTATTTTTATGACTCTCATATTTTTACATATAGAAAGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAAATGTATTTTTATGACTCTCATATTTTTACATATAGAAAGTAT  300

seq1  CTCATTGCCAGAGAGGTTATATATTCAATTTCCTGGAGACTGAAAGATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTGCCAGAGAGGTTATATATTCAATTTCCTGGAGACTGAAAGATTA  350

seq1  TTTTTGAGCAAAAGTCGGTGAAATAAATATAATAATGCCCTTAAATATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAGCAAAAGTCGGTGAAATAAATATAATAATGCCCTTAAATATGC  400

seq1  TAGATTTATTTAATCAATAATAACATAAGGATTATCTCCCTAAACTTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTATTTAATCAATAATAACATAAGGATTATCTCCCTAAACTTGGA  450

seq1  AATTCTTCCATAAAATCTGAATCCCCCTCATTGAGGTGCAGCTTCTCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTCCATAAAATCTGAATCCCCCTCATTGAGGTGCAGCTTCTCTGA  500

seq1  AGGCAATGGGCAAAGCCAAATGTTTGCCAAGTCCCTGTCTCATTGTGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAATGGGCAAAGCCAAATGTTTGCCAAGTCCCTGTCTCATTGTGTCC  550

seq1  TGTGCACGTATGACAGGTTCTGAGCATCAATTATAATTTAAAAACTCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCACGTATGACAGGTTCTGAGCATCAATTATAATTTAAAAACTCAAT  600

seq1  TTTAGCATTAAAATCACAAAATGTAAATGACATTATTATAAAGAAAAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCATTAAAATCACAAAATGTAAATGACATTATTATAAAGAAAAATA  650

seq1  GCTGTGGACAAGTCAGATTAGTTTACACAGATACATTCTTATCTGATGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGGACAAGTCAGATTAGTTTACACAGATACATTCTTATCTGATGGA  700

seq1  AGAAAAAAAACAAACCTCCAAACCAATCCCCAGCATCCTTTAAGTGAGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAAACAAACCTCCAAACCAATCCCCAGCATCCTTTAAGTGAGGC  750

seq1  TTAAGAGCAATATTATTAATCAATAGCAAGGGAAAGAGGCCACAGCATCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGCAATATTATTAATCAATAGCAAGGGAAAGAGGCCACAGCATCA  800

seq1  TTTAGTTCCCTGTGGTACAGACCTTCCCTATTGAGCATCCTTTATTTGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTCCCTGTGGTACAGACCTTCCCTATTGAGCATCCTTTATTTGCC  850

seq1  CCATACACAAAACACCAAAGTTAAAAGTTGACAAGGAATTCAAATAAAAT  900
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CCATACACAAAACACCAAAGTTAAAAGTTGAC-AGGAATTCAAATAAAAT  899

seq1  GAGTCTGCTACAAACTCCACACCATATACATGGAGAGACTAATTATTCCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTGCTACAAACTCCACACCATATACATGGAGAGACTAATTATTCCC  949

seq1  CCGCTTGTTTGGCGGTTATCATTAGAGTACATCTCGTTTTACTGTTTTTG  1000
      ||||||||||||||  |||||||||||||||||||| ||||||| |||||
seq2  CCGCTTGTTTGGCG--TATCATTAGAGTACATCTCG-TTTACTG-TTTTG  995

seq1  TATGTGCTTTTACATGTTTCTCCAGTTTGATATTATCTGTTACAAACAGC  1050
      ||||||| |||||||| |||| ||||||||||||||||| ||| ||||| 
seq2  TATGTGC-TTTACATG-TTCT-CAGTTTGATATTATCTG-TAC-AACAG-  1039

seq1  CAGCTACTTAGGAGCTGCTTCCACAGTATTTTATAACAAGCCCGGGCGGG  1100
      ||||||| |||||||||| |||||||||||||||||||       || ||
seq2  CAGCTAC-TAGGAGCTGC-TCCACAGTATTTTATAACA-------GCTGG  1080

seq1  CAC-TTAATGAGCCTATTACAAGGACTACAGGGAGAAGAGGCTTTTGTGA  1149
      | | |||||||  | |||||||||||||||||    ||||   |||||||
seq2  CGCATTAATGA--CCATTACAAGGACTACAGG----AGAGAGCTTTGTGA  1124

seq1  GCCCCTTTCTGCCTGTCCC  1168
         || ||||| |||||||
seq2  ---CCCTTCTG-CTGTCCC  1139