BAC Information

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BAC

Clone NameB6Ng01-012K23
Chromosome7 (Build37)
Map Location 51,510,684 - 51,511,524
singlet/doubletsinglet
Overlap geneAcpt
Upstream geneZfp715, Siglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik, A230106M20Rik, 4931406B18Rik, LOC668630, LOC100039946, Cd33, BC043301, Zfp719, 4933405K07Rik, Ceacam18, Siglece, Atpbd3, Klk14, Klk13, Klk12, Klk11, Klk10, Klk9, Klk8, Klk7, Klk6, Klk5, Klk4, Klk2-ps, Klk15, Klk1b7-ps, Klk1b8, Klk1b1, Klk1b9, Klk1b10-ps, Klk1b11, LOC100039713, Klk1b26, Klk1b18-ps, Klk1b27, Klk1b14-ps, Klk1b15-ps, Klk1b21, Klk1b22, Klk1b16, Klk1b24, Klk1b3, Klk1b4, Klk1b5, Klk1, 1700028J19Rik, LOC668661
Downstream geneLOC628854, EG638453, Clec11a, Shank1, 1700008O03Rik, Syt3, Lrrc4b, 0610012D14Rik, Josd2, 2310044H10Rik, 1700021P22Rik, Mybpc2, Spib, Pold1, Nr1h2, Napsa, Kcnc3, Myh14, 1700023D19Rik, Zfp473, Vrk3, EG628904, Atf5, Nup62, Il4i1, Tbc1d17, Akt1s1, Pnkp, Ptov1, Med25, Fuz, Ap2a1, Stk22s1, Cpt1c, Prmt1, Bcl2l12, Irf3, AI480556, Rras, Prr12, Prrg2, Nosip, Rcn3, Fcgrt, Rps11, Rnu35b, Rpl13a, Rnu35a, Rnu34, Rnu33, Rnu32, Flt3l, Aldh16a1, Pih1d1, Slc17a7, Gm581, LOC100039953, Tifp39, BC050196, Dkkl1, Tead2, Cd37
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012K23.bB6Ng01-012K23.g
ACCDH847708DH847709
length8441,186
definitionDH847708|Mus musculus domesticus DNA, BAC clone: B6Ng01-012K23, 5' end.DH847709|Mus musculus domesticus DNA, BAC clone: B6Ng01-012K23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccttgagttttgaccctgaatgcctgtcctttgaccccaccct
cttcctgacctttaaccttacgcactccaaactaaatctgaagtttttga
tttgagaccctgctgacccttggcctgtccacctgctctgctgccctcat
ccaccccaggtgtacatccgcagcacagactttgaccggacattggagag
tgcacaagccaacctggctgggctcttccctgaggctgcccctggaagtc
ctgagactgactggaagcccattccagtgcacacagtgcctgtgtctgag
gacaaggtcagggggcttcatctggtgggagaaacagaagaatcgagttt
aatctcattctgggaaccttaatgagactttctcaaaatgaaaaaaaaaa
aaaacaaacaaacagtttaacaagaggagtggaatgtagtataggggtaa
accccccagcttagaatcctctagtgaggaggggctgggaggagtgtggc
tcagtggtaaactacctacctagggaggagctggggggtgtggcttagag
gtagaaggatttcctagcctgtccaaggttctgggttctataaccaacac
cacacatacaaaaaaggatggaaataaatcccagtactgagttggagagg
ggaagaggcagctccaagccaggtggatccatttctggaagcccaaaaac
tctgaaaatcaaaaaaggttatccctggtagagctaactgtccggagtag
gtaagctgactccccctgtccaatccacctggataacagggaaaactggg
acagttaatggctagaaaccctagccccatcgttaactgtgaga
gaattccagtaatatgggtaaggttaaattgttgacagagagtctcaaat
gcttgactgtaacagccatttccattacctgttttaatctgatttgaaac
aaccagcagagagaaatgatataggcaatgactaattacagttttagttg
cttctcctgttaaaacagttgcaattagaaagcctgaaaaggtgtcaagt
cacatgtacatacatttgatttttttcaaaatcaaaagtatgagtaatat
ccatttgccataattgattaggtataagtccttgaggattaacaccatta
tgtggtacaggtagaagctgaggacactgaaaacaagtctttacaatttg
acgtgtacattctctagaaataccaaattgttgtctcaagctattactat
tttgatgattaaagaatgagattgtttgaccagttgttcctgtgtaaggc
ctataaccatcctggtatacaaatctgctgtggcattgccctcactctgg
ggtccaggcaatccagtatgagctcttaaatgacctacaaaataaagaac
tgtaagttctcttgaattgaattgtatttgcataaataattgtaaaattt
gagaattaccagtatctaaaaaaggaaaggtttcaagtagttgtaaacca
tgagctatatattggctgccagtatataaattaaatgtttggtttttcaa
catttcaaaatcagcagctacagtatgtagctcaattatttgtgctgaag
caggggggaattcaagagaatgaacatgtgatccaatcacatatgctgcc
ttcccattagatgaaccatctgtaaatacattaagtgtgttgtcaatggg
ctgcatgcataagtttacagggtatacaaagcatgcatagaggcaaattg
tacaatttgtcttttggatatggttattaatttgctaaaaatttgtacat
gcatagccaatatcagatattgcaataaccaatttatgctgtttgcatag
gataaatatttcagtcagtattaccgaaatatcgtgactccatctacacc
tgcatacaacaaacgcttcttatagggttagaccttctttgggatgacaa
gatgatccatatgtcttggcaaaggctgctatgcctgatagcataccagg
cctacatgactagcagtaatgatgtatcaggcctta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_51510684_51511524
seq2: B6Ng01-012K23.b_41_884 (reverse)

seq1  TCTCACAGTTGGCCATGGGGCCAGGGTCTCTAGCCCTCAACTCTCCCAGT  50
      ||||||||||  | ||||||| ||||| ||||||| | |||| |||||||
seq2  TCTCACAGTTAACGATGGGGCTAGGGTTTCTAGCCATTAACTGTCCCAGT  50

seq1  TTCCCCTGTTATCCAGCTGTGCTGGGCA-GGGGTGTCAGCTTACCAACTC  99
      || ||||||||||||| ||   ||| || |||| ||||||||||| ||||
seq2  TTTCCCTGTTATCCAGGTGGATTGGACAGGGGGAGTCAGCTTACCTACTC  100

seq1  TGGACAGCTAGCTCTACCAGGGATAACC-TTTCTGA-TCTCAGCTGTTCT  147
       |||||| |||||||||||||||||||| ||| ||| | ||||   || |
seq2  CGGACAGTTAGCTCTACCAGGGATAACCTTTTTTGATTTTCAGAGTTTTT  150

seq1  GGGCTTCCAGAAATGGATCCACCTGGCTTGGAGCTGCCTCTTCCCCTCTC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTCCAGAAATGGATCCACCTGGCTTGGAGCTGCCTCTTCCCCTCTC  200

seq1  CAGCTCAGTACTGGGCTTTATTTCCATCCTTTTTTGTATGTGTGGTGTTG  247
      || |||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CAACTCAGTACTGGGATTTATTTCCATCCTTTTTTGTATGTGTGGTGTTG  250

seq1  GTTATAGAACCCAGAACCTTGGACAGGCTAGGAAATCCTTCTACCTCTAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAGAACCCAGAACCTTGGACAGGCTAGGAAATCCTTCTACCTCTAA  300

seq1  GCCACACCCCCCAGCTCCTCCCTAGGTAGGTAGTTTACCACTGAGCCACA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACCCCCCAGCTCCTCCCTAGGTAGGTAGTTTACCACTGAGCCACA  350

seq1  CTCCTCCCAGCCCCTCCTCACTAGAGGATTCTAAGCTGGGGGGTTTACCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCCAGCCCCTCCTCACTAGAGGATTCTAAGCTGGGGGGTTTACCC  400

seq1  CTATACTACATTCCACTCCTCTTGTTAAACTGTTTGTTTGTTTTTTTTTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACTACATTCCACTCCTCTTGTTAAACTGTTTGTTTGTTTTTTTTTT  450

seq1  TTTTCATTTTGAGAAAGTCTCATTAAGGTTCCCAGAATGAGATTAAACTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATTTTGAGAAAGTCTCATTAAGGTTCCCAGAATGAGATTAAACTC  500

seq1  GATTCTTCTGTTTCTCCCACCAGATGAAGCCCCCTGACCTTGTCCTCAGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTTCTGTTTCTCCCACCAGATGAAGCCCCCTGACCTTGTCCTCAGA  550

seq1  CACAGGCACTGTGTGCACTGGAATGGGCTTCCAGTCAGTCTCAGGACTTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGCACTGTGTGCACTGGAATGGGCTTCCAGTCAGTCTCAGGACTTC  600

seq1  CAGGGGCAGCCTCAGGGAAGAGCCCAGCCAGGTTGGCTTGTGCACTCTCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGCAGCCTCAGGGAAGAGCCCAGCCAGGTTGGCTTGTGCACTCTCC  650

seq1  AATGTCCGGTCAAAGTCTGTGCTGCGGATGTACACCTGGGGTGGATGAGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCCGGTCAAAGTCTGTGCTGCGGATGTACACCTGGGGTGGATGAGG  700

seq1  GCAGCAGAGCAGGTGGACAGGCCAAGGGTCAGCAGGGTCTCAAATCAAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGAGCAGGTGGACAGGCCAAGGGTCAGCAGGGTCTCAAATCAAAA  750

seq1  ACTTCAGATTTAGTTTGGAGTGCGTAAGGTTAAAGGTCAGGAAGAGGGTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGATTTAGTTTGGAGTGCGTAAGGTTAAAGGTCAGGAAGAGGGTG  800

seq1  GGGTCAAAGGACAGGCATTCAGGGTCAAAACTCAAGGTGAATTC  841
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCAAAGGACAGGCATTCAGGGTCAAAACTCAAGGTGAATTC  844