BAC Information

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BAC

Clone NameB6Ng01-013C04
Chromosome7 (Build37)
Map Location 94,222,142 - 94,223,262
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666418, LOC100039471, EG546981, Vmn2r-ps86, Vmn2r76, Olfr310, Olfr309, Olfr308, Olfr307, Olfr306-ps1, Olfr305, Olfr304, Olfr303, Olfr301, Olfr1531-ps1, Olfr300-ps1, Olfr299, Olfr298, Olfr297, Olfr296-ps1, Olfr295, Olfr294, Olfr293, Olfr292, Folh1, EG546983, Vmn2r-ps87, LOC637896, EG621430
Downstream geneLOC621477, Nox4, Tyr, Grm5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013C04.bB6Ng01-013C04.g
ACCDH848030DH848031
length1,2681,109
definitionDH848030|Mus musculus domesticus DNA, BAC clone: B6Ng01-013C04, 5' end.DH848031|Mus musculus domesticus DNA, BAC clone: B6Ng01-013C04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgaagacagaaaaactaacaaagagaagaggaacaacaaatgca
agcattactaacagaatacagtaaatacaagagagattcccaggcattca
agatacaatagaagaaattacaacatctgttaaagaacatattaaatcga
aaataatcttaacacaaactatctaggaagtctgtgataccatgaaaaga
actaacctaagaatattaagaaggtaagaatttcaaagtctaaactataa
tgtccagaaatccaacataatcctggaagaaaactttcccaacttaaaga
aagagatgcccatatacactcaaaaagcctatggaacacgaattagtatg
ggacagaaaaaacaagcttcacaccatatattaatcagaacacataatat
acagaacaaagaaagaatattaaaagttgccatggaaattaaccacgtaa
catacaaaggcaaacatgtccaaatttcatctgatttttttcaaaagaga
ttctacaagctagaagggtctagtgagatttcttacaacctttaaaaaaa
accacaaatgctaaccttggttattatatccaccaaaattctcagtcacc
atcaatggagaaaacaagacattttaagatagataaattcaaacagtatt
tctccacaaatctagccctacacaaagtactaagatgaaaactccaaccc
aaggaggataacaacatccaagaaaacacaggaaataagtaatcccatac
catcaaaaacaagggaagctcacacaaatgcacattaataacagtcactg
gtcattaatatctcaacatcaatggacttacttccctcaataaaaaggca
cacactaacagaatcaatatgaaaacagttgtgatagtttgtatgtcctt
ggaccagggagaggcaccatctgaagtgtggccttgttggaatagtgtga
cctcattggaatgggtgtgtcactgtgggtgtggatattaagatcctcac
cctagtttcctggaagtcagtctccactagcagcctttggatgaagacat
aagaactcctcagcttcctcctgcatcatgcctgcctgatcctgcccatg
cctccccacctggatgataatggacctgaaccctctggaacctgtaagcc
agccccaattaacgttgccttttataagacttgccttggtcagtgtcggt
tcacacgcagtaaaaccccttactctgacaccgctgaattggaatttgtt
ttccacacgctctgtaag
gaattccttttctttttttttttttctactagaaaactccaagttagaga
caataatagaaactacatagggaatacacttgcttagcaacagagatatt
tgtaatatgtctgtcaacatagacatcagagtatttcaaattcagttttg
actaatttcattaagatttgcactttcaacactaactgtttcagatatcc
atataaaaccagatacactgaatctaatagaagagaaagtgggaaagagc
ctcaaaaacatttcatgaacagaacaccaatggtttaggctctacgatca
actattaacaaatgggatctcacaaaattgaaactcttctgtaaggcaaa
gtaaactgtcaataggacaaaactgcaacctacagattgggtaaatatat
ttaccaaccctacatttgatagaaggcaaatatacaatacacacaaagaa
ctcatgaagttagaatccagagaaccaaaacactatctaaaaaacggggt
acatagctaaacaatgaattcttaactgagcaatcttcaacggccaagaa
gcacctaaagaaatgttcaacgtcttactcatcagacaaatgcaaatcaa
aacgaccttgagattccacctcacaccagtcatcatgtaggtgaattaat
aatccaacattttatatctaaaatttcacttgctttatcaattctgatag
tgtgttcataataatgatagaaatatctaaacactgctgataaaataaca
tttaaaagcatacagccatctttattatgtagacaaaatataggaagaga
aatatactctgttttagacacatgtctgttaatatgatgtacaaggattc
atagaaaactgatacaacattcctattctgtaatgaacatacatatatat
gaagaaaattaggaagatgatcaagactacctaataacgtttgcaactca
gtatgtattcatgagtcagtgtctactttagtatttactttcattgtaaa
atggaaatgcaggtctatataagaattacacagcttgtctttgcttataa
ctcatacttagagaaattaaaacatttctctgactttcctattctatacc
aataaatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_94222142_94223262
seq2: B6Ng01-013C04.g_65_1173 (reverse)

seq1  ATATTTATGTGGTATAGAATGAGAAAAGTCTAGAGAAATGTTTTAATTTC  50
      |||||||| ||||||||||| || |||||| |||||||||||||||||||
seq2  ATATTTAT-TGGTATAGAAT-AGGAAAGTC-AGAGAAATGTTTTAATTTC  47

seq1  TCCTTAGTTATGAGTAATAAAGCAAAGAACAAGCTGTGTATTTCTTATAT  100
      ||  ||  ||||||| || |||||||| |||||||||||| |||||||||
seq2  TC--TAAGTATGAGTTAT-AAGCAAAG-ACAAGCTGTGTAATTCTTATAT  93

seq1  AGACCCCTGCATTTCCATTTTTAACAATGAAAAGTAAATTACTAAAGTAG  150
      |||  ||||||||||||||||  |||||| |||||||| |||||||||||
seq2  AGA--CCTGCATTTCCATTTT--ACAATG-AAAGTAAA-TACTAAAGTAG  137

seq1  ACACTGACTCATGAATACATACTGAGTTGCAAAACGTTATTAGGTAGTCT  200
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ACACTGACTCATGAATACATACTGAGTTGC-AAACGTTATTAGGTAGTCT  186

seq1  TGATCATCTTCCTAATTTTCTTCATATATATGTATGTTCATTACAGAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCATCTTCCTAATTTTCTTCATATATATGTATGTTCATTACAGAATA  236

seq1  GGAATGTTGTATCAG-TTTCTATGAATCCTTGTACATCATA-TAACAGAC  298
      ||||||||||||||| ||||||||||||||||||||||||| ||||||||
seq2  GGAATGTTGTATCAGTTTTCTATGAATCCTTGTACATCATATTAACAGAC  286

seq1  ATGTGTCTAAAACAGAGTATATTTCTCTTCCTATATTTTGTCTACATAAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCTAAAACAGAGTATATTTCTCTTCCTATATTTTGTCTACATAAT  336

seq1  AAAGATGGCTGTATGCTTTTAAATGTTATTTTATCAGCAGTGTTTAGATA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGGCTGTATGCTTTTAAATGTTATTTTATCAGCAGTGTTTAGATA  386

seq1  TTTCTATCATTATTATGAACACACTATCAGAATTGATAAAGCAAGTGAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATCATTATTATGAACACACTATCAGAATTGATAAAGCAAGTGAAA  436

seq1  TTTTAGATATAAAATGTTGGATTATTAATTCACCTACATGATGACTGGTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGATATAAAATGTTGGATTATTAATTCACCTACATGATGACTGGTG  486

seq1  TGAGGTGGAATCTCAAGGTCGTTTTGATTTGCATTTGTCTGATGAGTAAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTGGAATCTCAAGGTCGTTTTGATTTGCATTTGTCTGATGAGTAAG  536

seq1  ACGTTGAACATTTCTTTAGGTGCTTCTTGGCCGTTGAAGATTGCTCAGTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTGAACATTTCTTTAGGTGCTTCTTGGCCGTTGAAGATTGCTCAGTT  586

seq1  AAGAATTCATTGTTTAGCTATGTACCCCGTTTTTTAGATAGTGTTTTGGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTCATTGTTTAGCTATGTACCCCGTTTTTTAGATAGTGTTTTGGT  636

seq1  TCTCTGGATTCTAACTTCATGAGTTCTTTGTGTGTATTGTATATTTGCCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGATTCTAACTTCATGAGTTCTTTGTGTGTATTGTATATTTGCCT  686

seq1  TCTATCAAATGTAGGGTTGGTAAATATATTTACCCAATCTGTAGGTTGCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCAAATGTAGGGTTGGTAAATATATTTACCCAATCTGTAGGTTGCA  736

seq1  GTTTTGTCCTATTGACAGTTTACTTTGCCTTACAGAAGAGTTTCAATTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTCCTATTGACAGTTTACTTTGCCTTACAGAAGAGTTTCAATTTT  786

seq1  GTGAGATCCCATTTGTTAATAGTTGATCGTAGAGCCTAAACCATTGGTGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGATCCCATTTGTTAATAGTTGATCGTAGAGCCTAAACCATTGGTGT  836

seq1  TCTGTTCATGAAATGTTTTTGAGGCTCTTTCCCACTTTCTCTTCTATTAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCATGAAATGTTTTTGAGGCTCTTTCCCACTTTCTCTTCTATTAG  886

seq1  ATTCAGTGTATCTGGTTTTATATGGATATCTGAAACAGTTAGTGTTGAAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTGTATCTGGTTTTATATGGATATCTGAAACAGTTAGTGTTGAAA  936

seq1  GTGCAAATCTTAATGAAATTAGTCAAAACTGAATTTGAAATACTCTGATG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAATCTTAATGAAATTAGTCAAAACTGAATTTGAAATACTCTGATG  986

seq1  TCTATGTTGACAGACATATTACAAATATCTCTGTTGCTAAGCAAGTGTAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGTTGACAGACATATTACAAATATCTCTGTTGCTAAGCAAGTGTAT  1036

seq1  TCCCTATGTAGTTTCTATTATTGTCTCTAACTTGGAGTTTTCTAGTAGAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTATGTAGTTTCTATTATTGTCTCTAACTTGGAGTTTTCTAGTAGAA  1086

seq1  AAAAAAAAAAAGAAAAGGAATTC  1121
      |||||||||||||||||||||||
seq2  AAAAAAAAAAAGAAAAGGAATTC  1109