BAC Information

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BAC

Clone NameB6Ng01-013D01
Chromosome7 (Build37)
Map Location 4,803,286 - 4,980,727
singlet/doubletdoublet
Overlap geneIsoc2b, Isoc2a, LOC384524, Zfp628, Nat14, A430110N23Rik, LOC665049, Gm1079, Gm1078, Zfp579, Fiz1, Zfp524, 6430526N21Rik
Upstream geneLOC675749, LOC100038908, LOC100038909, Pira11, Pira3, LOC100041186, LOC664841, Lair1, Ttyh1, Leng8, Leng9, Cdc42ep5, LOC384521, EG232801, Ncr1, Gp6, LOC100041851, Atp6v0c-ps1, Rdh13, Eps8l1, Ppp1r12c, Tnnt1, Tnni3, 6030429G01Rik, Syt5, Ptprh, LOC669557, Tmem86b, Saps1, EG628211, 1500019G21Rik, Brsk1, BC022651, Suv420h2, Cox6b2, 4930401F20Rik, Il11, 4930572D21Rik, 2210411K11Rik, Rpl28, Ube2s, D430041B17Rik
Downstream gene4632433K11Rik, Zfp784, Zfp580, Ccdc106, U2af2, Epn1, Rfpl4, Rasl2-9, EG665126, V1rd5, V1rd3, EG665150, Nlrp2, EG272350, V1rd4, EG665163, V1rd10, EG630071, EG665255, EG636697, EG636705, LOC636731, LOC673215, V1rd2, LOC100041627, LOC100041637, V1rd1, LOC100041647, V1rd11, LOC100041666, V1rd6, EG384525, EG269859
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013D01.bB6Ng01-013D01.g
ACCDH848072DH848073
length1,073658
definitionDH848072|Mus musculus domesticus DNA, BAC clone: B6Ng01-013D01, 5' end.DH848073|Mus musculus domesticus DNA, BAC clone: B6Ng01-013D01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(4,979,647 - 4,980,727)(4,803,286 - 4,803,942)
sequence
gaattccaggaagtcaaatgggtaactctggaagtggaccccgtcctcgc
ccccgatgccgctgctcccgccacccccggcaccgctgcctgcctggttt
gcctccatctctggtcggtggaaagaagggagaccctgtgaagaagagga
tggggactgagcaaagagagcccgtgagtagcaagcaaagggaactagat
ccatgcctctgcaccaacagcattctcttagcagctcgcctatcattcca
cccatacatctgctttcctctagcctgtaataactcagggtcattgctag
cctcctcccaaccttacctccatcttttctggatcttcacacacctccct
attcatcctcagactgtctttatgcacctgctttctcttccaggactaat
tccccaaggacctgggaggtggggtagcgctcaaactctcctctaaattg
attccctctactccattccccataccttcctctggtctcagtcctctggt
tttgccactgcaaaatgaagataagaatagatcccatctgagtggtttag
acagcagcttcaggaaccaaaacgccagcttcaaacctaagcctccaccc
ccaacccccctttttttcttctttgtttttagacagtgtttctctgtgta
gccctggctatcctagaattcactctgtagaccaagctggccttgaactc
acagagatccacttgcctctgcctcctgagtaactgggattcaaggtgtg
cgccaccatcaacctgtgtgtgtgtgtgtgtctgcgctcacagtcatttt
ctagctgtgtgaccatgggtaaatgactgaacctctgtgccacacgacca
ttgtaagtgagggcaatccaagcactcagaggctgagattgcttccagtt
tgaggcaaccttatggtagttggggcagaggaacaagggctaatacatca
ggatctatcaagcataaggctgttgtgagattcagcgctttaacattaac
aggtgaaggctcctggcaccctgtaaacaccatggtatatatggtatact
tctatttaatcgtttagtatcat
gaattcctccttttacctccctccctccctctcccttcttccctctttcc
ccctccccttctctccctcccttcctcatgtccttcttccctctccctcc
ttcttcccccttcttccctctctttctccttttcttcctctctgccgccc
agctcataggtgaggccacttccccccaaaagctttctctgagcatgtcc
actctgctgccagtgtcagcccctcagactgtatcccctttctcctcccc
aaaggctgtacaatgctggcaaataattctgtgacctctttctaactata
cctaatgaggctcactcaggcttccaccccctgtggaaactgagtctaag
caataaggtgacctgctcagggacatacagatcttggacactgtctttga
gataaaaagtgccatggttggggatagaggtggagagatggctcagccat
taaaagctaggttcacaaccaaaaaatataagaaaaagtgccacagggat
tgtctatgtagcccaggctgggcttacacagtaacttacaatcttcttgc
ctcagcctcctgagttctggggtagcaggcatgtgccaccgtgtcaggtt
ctttgagctcctttaatgcccagcttggccaaatacttccctctagccct
gctgaacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_4979647_4980727
seq2: B6Ng01-013D01.b_43_1115 (reverse)

seq1  ATGATACT-AACAATT-AATAGAAGGTATTACCATATATTACCATGGGTG  48
      |||||||| ||| ||| ||||||| ||| ||||||||| |||||| ||||
seq2  ATGATACTAAACGATTAAATAGAA-GTA-TACCATATA-TACCAT-GGTG  46

seq1  TTTACAGGGTGCCAGGGAGCCTTCCACCTGTTAATGTTAAAGCGCTGAAT  98
      |||||||||||||| |||||||| ||||||||||||||||||||||||||
seq2  TTTACAGGGTGCCA-GGAGCCTT-CACCTGTTAATGTTAAAGCGCTGAAT  94

seq1  CTTCACAACAGCCCTATGCTTGATAGATCCTGATTGTCTTAGCCCTTGTT  148
      | ||||||||||| ||||||||||||||||||| ||| ||||||||||||
seq2  C-TCACAACAGCCTTATGCTTGATAGATCCTGA-TGTATTAGCCCTTGTT  142

seq1  CCTTCTGCCCCAACTACCATAAGGTTGCCTCAAACTTGGAGCAATCTCAG  198
      || ||||||||||||||||||||||||||||||||| | |||||||||||
seq2  CC-TCTGCCCCAACTACCATAAGGTTGCCTCAAACTGGAAGCAATCTCAG  191

seq1  CCTCCTGAGTGCTTGGATTGCCCTCACTTACAATGGTCGTGTGGCACAGA  248
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCT-CTGAGTGCTTGGATTGCCCTCACTTACAATGGTCGTGTGGCACAGA  240

seq1  GGTTCAGTCATTTACCCATGGTCACACAGCTAGAAAATGACTGTGAGCGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCAGTCATTTACCCATGGTCACACAGCTAGAAAATGACTGTGAGCGC  290

seq1  AGACACACACACACACACAGGTTGATGGTGGCGCACACCTTGAATCCCAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACACACACACACACAGGTTGATGGTGGCGCACACCTTGAATCCCAG  340

seq1  TTACTCAGGAGGCAGAGGCAAGTGGATCTCTGTGAGTTCAAGGCCAGCTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCAGGAGGCAGAGGCAAGTGGATCTCTGTGAGTTCAAGGCCAGCTT  390

seq1  GGTCTACAGAGTGAATTCTAGGATAGCCAGGGCTACACAGAGAAACACTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTACAGAGTGAATTCTAGGATAGCCAGGGCTACACAGAGAAACACTG  440

seq1  TCTAAAAACAAAGAAGAAAAAAAGGGGGGTTGGGGGTGGAGGCTTAGGTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAAACAAAGAAGAAAAAAAGGGGGGTTGGGGGTGGAGGCTTAGGTT  490

seq1  TGAAGCTGGCGTTTTGGTTCCTGAAGCTGCTGTCTAAACCACTCAGATGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTGGCGTTTTGGTTCCTGAAGCTGCTGTCTAAACCACTCAGATGG  540

seq1  GATCTATTCTTATCTTCATTTTGCAGTGGCAAAACCAGAGGACTGAGACC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTATTCTTATCTTCATTTTGCAGTGGCAAAACCAGAGGACTGAGACC  590

seq1  AGAGGAAGGTATGGGGAATGGAGTAGAGGGAATCAATTTAGAGGAGAGTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAGGTATGGGGAATGGAGTAGAGGGAATCAATTTAGAGGAGAGTT  640

seq1  TGAGCGCTACCCCACCTCCCAGGTCCTTGGGGAATTAGTCCTGGAAGAGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCGCTACCCCACCTCCCAGGTCCTTGGGGAATTAGTCCTGGAAGAGA  690

seq1  AAGCAGGTGCATAAAGACAGTCTGAGGATGAATAGGGAGGTGTGTGAAGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGTGCATAAAGACAGTCTGAGGATGAATAGGGAGGTGTGTGAAGA  740

seq1  TCCAGAAAAGATGGAGGTAAGGTTGGGAGGAGGCTAGCAATGACCCTGAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAAAGATGGAGGTAAGGTTGGGAGGAGGCTAGCAATGACCCTGAG  790

seq1  TTATTACAGGCTAGAGGAAAGCAGATGTATGGGTGGAATGATAGGCGAGC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACAGGCTAGAGGAAAGCAGATGTATGGGTGGAATGATAGGCGAGC  840

seq1  TGCTAAGAGAATGCTGTTGGTGCAGAGGCATGGATCTAGTTCCCTTTGCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAGAGAATGCTGTTGGTGCAGAGGCATGGATCTAGTTCCCTTTGCT  890

seq1  TGCTACTCACGGGCTCTCTTTGCTCAGTCCCCATCCTCTTCTTCACAGGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACTCACGGGCTCTCTTTGCTCAGTCCCCATCCTCTTCTTCACAGGG  940

seq1  TCTCCCTTCTTTCCACCGACCAGAGATGGAGGCAAACCAGGCAGGCAGCG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTTCTTTCCACCGACCAGAGATGGAGGCAAACCAGGCAGGCAGCG  990

seq1  GTGCCGGGGGTGGCGGGAGCAGCGGCATCGGGGGCGAGGACGGGGTCCAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCGGGGGTGGCGGGAGCAGCGGCATCGGGGGCGAGGACGGGGTCCAC  1040

seq1  TTCCAGAGTTACCCATTTGACTTCCTGGAATTC  1081
      |||||||||||||||||||||||||||||||||
seq2  TTCCAGAGTTACCCATTTGACTTCCTGGAATTC  1073

seq1: chr7_4803286_4803942
seq2: B6Ng01-013D01.g_66_723

seq1  GAATTCCTCCTTTTACCTCCCTCCCTCCCTCTCCCTTCTTCCCTCTTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCTTTTACCTCCCTCCCTCCCTCTCCCTTCTTCCCTCTTTCC  50

seq1  CCCTCCCCTTCTCTCCCTCCCTTCCTCATGTCCTTCTTCCCTCTCCCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCCTTCTCTCCCTCCCTTCCTCATGTCCTTCTTCCCTCTCCCTCC  100

seq1  TTCTTCCCCCTTCTTCCCTCTCTTTCTCCTTTTCTTCCTCTCTGCCGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCCCCTTCTTCCCTCTCTTTCTCCTTTTCTTCCTCTCTGCCGCCC  150

seq1  AGCTCATAGGTGAGGCCACTTCCCCCCAAAAGCTTTCTCTGAGCATGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCATAGGTGAGGCCACTTCCCCCCAAAAGCTTTCTCTGAGCATGTCC  200

seq1  ACTCTGCTGCCAGTGTCAGCCCCTCAGACTGTATCCCCTTTCTCCTCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCTGCCAGTGTCAGCCCCTCAGACTGTATCCCCTTTCTCCTCCCC  250

seq1  AAAGGCTGTACAATGCTGGCAAATAATTCTGTGACCTCTTTCTAACTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTGTACAATGCTGGCAAATAATTCTGTGACCTCTTTCTAACTATA  300

seq1  CCTAATGAGGCTCACTCAGGCTTCCACCCCCTGTGGAAACTGAGTCTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATGAGGCTCACTCAGGCTTCCACCCCCTGTGGAAACTGAGTCTAAG  350

seq1  CAATAAGGTGACCTGCTCAGGGACATACAGATCTTGGACACTGTCTTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAGGTGACCTGCTCAGGGACATACAGATCTTGGACACTGTCTTTGA  400

seq1  GATAAAAAGTGCCATGGTTGGGGATAGAGGTGGAGAGATGGCTCAGCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAAAGTGCCATGGTTGGGGATAGAGGTGGAGAGATGGCTCAGCCAT  450

seq1  TAAAAGCTAGGTTCACAACCAAAAAATATAAGAAAAAGTGCCACAGGGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCTAGGTTCACAACCAAAAAATATAAGAAAAAGTGCCACAGGGAT  500

seq1  TGTCTATGTAGCCCAGGCTGGGCTTACACAGAAACTTACAATCTTCTTGC  550
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGTCTATGTAGCCCAGGCTGGGCTTACACAGTAACTTACAATCTTCTTGC  550

seq1  CTCAGCCTCCTGAGTTCTGGGGTAGCAGGCATGTGCCACCGTGTCAGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCTCCTGAGTTCTGGGGTAGCAGGCATGTGCCACCGTGTCAGGTT  600

seq1  CTTTGAGCTCCTTTAATGCCCAGCTTGGCC-AATACTTCCCTCTAGCCCT  649
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTTTGAGCTCCTTTAATGCCCAGCTTGGCCAAATACTTCCCTCTAGCCCT  650

seq1  GCTGAACC  657
      ||||||||
seq2  GCTGAACC  658