BAC Information

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BAC

Clone NameB6Ng01-013H08
Chromosome7 (Build37)
Map Location 98,070,313 - 98,173,203
singlet/doubletdoublet
Overlap genenone
Upstream genel7Rn6, Eed, E230029C05Rik, EG384719, 2310010J17Rik, Picalm, Ccdc83, Sytl2, Ccdc89, Crebzf, Tmem126a, Tmem126b, B230218P12Rik, LOC666689, LOC621816, LOC100039943
Downstream geneDlg2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013H08.bB6Ng01-013H08.g
ACCDH848267DH848268
length1,115968
definitionDH848267|Mus musculus domesticus DNA, BAC clone: B6Ng01-013H08, 5' end.DH848268|Mus musculus domesticus DNA, BAC clone: B6Ng01-013H08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,070,313 - 98,071,432)(98,172,234 - 98,173,203)
sequence
gaattccaggacagccagggctacacagagaaaccctgtctcaaaaaaaa
taataataataagatttttttgctttagagttggtttgaatttacctaaa
attaagaatgttgaatatcttttaatctacttaaaaaccatttttattgt
agttgtaaaaacatctatataaaattctttctccatatctaattatttta
tgttattgaaatatgaaactcctcctatgtcctgcccaacatctaacagg
tttataattgtaatattttctgttcaagtatcctcattctttaaccatgt
attggcactgttatctggactatgacttttaaaaaatttaacaaatccta
acataacctcctgaaaacaccattttaatgaacctatgtgtaactcaagg
tcacagagactatctctgatattttcttctcagcattttacagctttagc
tctcacattgttccctccgatcaatttggagctcatttttgcatgtggta
tgtgcagatatttaagttcatagtttttcttgttgaaaaaaagtctattc
attcctcactggattaacttggggactctttttttgaaaaagatgttaag
tatgaatatctttgtggatttcattctttcctactgagttgatgtctctc
cttctacttggtataagctaacaatcattgagaagccaccactgtagtgt
tgatgtcaacatcataaaaattctaatgctcacaagttatttgtttgctc
caagccatgaaagtataatgagagaaaggtgatttcaatataatctattt
aactcaaaaactcttatcttttctataacactgggttttttagtgatggg
tgtgtttactgcgttttctgcttagttttttaaggcacatgtattggatc
attatgattcattaataccttatttcaaccattttttatgcacattcttt
atagtcacagccattatttacctagctattgtgtgatacatataataaag
gaaatgcacaaaattcattaggaggccatcaataaacttgttgcattagc
atgtataaaaaagctagaggtgagaaaggataagatactaaattcaagtt
cagctcttcagctct
gaattccagttccattaggttcaaatctaggtgacattggagaagtcttt
ctactttctgggaataggaaatcaaataacagtactcaggatgcctactt
taacattagcaagaattaaactcacttatctatacctctatggtttcacc
ttagactgtgagctacttacacacacacacacacatctaacatctctagt
catcttagtaccatcagcagtacctctagcatcacctgtaaatatacaga
tgtgtgtagaaagagctgctcaataaatgaattttgagttttatatttaa
tatgtagaatagctgtcctatctatctatctatctatctatctatctatc
tatctatccatccatccatccatccatccatccatccatccatccatcca
tccatctatctatccatctcttcatctattaaatctctgttctgttgtac
agctcagcctgactagccacctcttggccatagaaagcctatttactttt
cccaagtggacattctttttatcccttgtatcttctaagatgtcattgat
cctttatgttttatggcttcaatgtgctgtggttggatgtgaggtttttt
tggttttacttacgactttagtaactttcttatttaaactttagtcagtt
ctttcttcaggaaaactctcagctactaagttctctaaaatccaccacat
attttttattcttttcccttcctcagtctctatttatattaatgaaatta
tttttccttgtgttattcattcttcttaatttctcctttaaaagttaatc
atcttaatctcttgttttatgtatgcaggctgcctatagctttcaatgtt
agaattattgagatctatttactatttaactcatttataacgggtatctt
ttttttcttatttcactcattctcattttcatctcttacctctgtctatc
cccctgtcctcctttgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_98070313_98071432
seq2: B6Ng01-013H08.b_46_1160

seq1  GAATTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAAAAAAA  50

seq1  TAATAATAATAAGATTTTTTTGCTTTAGAGTTGGTTTGAATTTACCTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATAATAAGATTTTTTTGCTTTAGAGTTGGTTTGAATTTACCTAAA  100

seq1  ATTAAGAATGTTGAATATCTTTTAATCTACTTAAAAACCATTTTTATTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAATGTTGAATATCTTTTAATCTACTTAAAAACCATTTTTATTGT  150

seq1  AGTTGTAAAAACATCTATATAAAATTCTTTCTCCATATCTAATTATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTAAAAACATCTATATAAAATTCTTTCTCCATATCTAATTATTTTA  200

seq1  TGTTATTGAAATATGAAACTCCTCCTATGTCCTGCCCAACATCTAACAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTGAAATATGAAACTCCTCCTATGTCCTGCCCAACATCTAACAGG  250

seq1  TTTATAATTGTAATATTTTCTGTTCAAGTATCCTCATTCTTTAACCATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAATTGTAATATTTTCTGTTCAAGTATCCTCATTCTTTAACCATGT  300

seq1  ATTGGCACTGTTATCTGGACTATGACTTTTAAAAAATTTAACAAATCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCACTGTTATCTGGACTATGACTTTTAAAAAATTTAACAAATCCTA  350

seq1  ACATAACCTCCTGAAAACACCATTTTAATGAACCTATGTGTAACTCAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAACCTCCTGAAAACACCATTTTAATGAACCTATGTGTAACTCAAGG  400

seq1  TCACAGAGACTATCTCTGATATTTTCTTCTCAGCATTTTACAGCTTTAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAGACTATCTCTGATATTTTCTTCTCAGCATTTTACAGCTTTAGC  450

seq1  TCTCACATTGTTCCCTCCGATCAATTTGGAGCTCATTTTTGCATGTGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACATTGTTCCCTCCGATCAATTTGGAGCTCATTTTTGCATGTGGTA  500

seq1  TGTGCAGATATTTAAGTTCATAGTTTTTCTTGTTGAAAAAAAGTCTATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGATATTTAAGTTCATAGTTTTTCTTGTTGAAAAAAAGTCTATTC  550

seq1  ATTCCTCACTGGATTAACTTGGGGACTCTTTTTTTGAAAAAGATGTTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTCACTGGATTAACTTGGGGACTCTTTTTTTGAAAAAGATGTTAAG  600

seq1  TATGAATATCTTTGTGGATTTCATTCTTTCCTACTGAGTTGATGTCTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATATCTTTGTGGATTTCATTCTTTCCTACTGAGTTGATGTCTCTC  650

seq1  CTTCTACTTGGTATAAGCTAACAATCATTGAGAAGCCACCACTGTAGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTACTTGGTATAAGCTAACAATCATTGAGAAGCCACCACTGTAGTGT  700

seq1  TGATGTCAACATCATAAAAATTTTAATGCTCACAAGTTATTTGTTTGCTC  750
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TGATGTCAACATCATAAAAATTCTAATGCTCACAAGTTATTTGTTTGCTC  750

seq1  CAAGCCATGAAAGTATAATGAGAGAAAGGTGATTTCAATATAATCTATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCATGAAAGTATAATGAGAGAAAGGTGATTTCAATATAATCTATTT  800

seq1  AACTCAAAAACTCTTATCTTTTCTATAACACTGGGTTTTTTAGTGATGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAAAAACTCTTATCTTTTCTATAACACTGGGTTTTTTAGTGATGGG  850

seq1  TGTGTTTACTGCGTTTTCTGCTTAGTTTTTTAAGGCACATGTATTGGATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTACTGCGTTTTCTGCTTAGTTTTTTAAGGCACATGTATTGGATC  900

seq1  ATTATGATTCATTAATACCTTATTTCAACCA-TATTTATGCACATCTTTA  949
      ||||||||||||||||||||||||||||||| | |||||||||||  || 
seq2  ATTATGATTCATTAATACCTTATTTCAACCATTTTTTATGCACATTCTTT  950

seq1  ATAGTCACAGCCATTATTTACCTAGCTAATTGTGTGATACATATTAATAA  999
      ||||||||||||||||||||||||||| ||||||||||||||| ||||||
seq2  ATAGTCACAGCCATTATTTACCTAGCT-ATTGTGTGATACATA-TAATAA  998

seq1  AGAAAATGCACAAAAATTCA-TAGGAGGCCATCAATAAAACTTGTTGCAT  1048
      || |||||||| |||||||| ||||||||||||||| |||||||||||||
seq2  AGGAAATGCAC-AAAATTCATTAGGAGGCCATCAAT-AAACTTGTTGCAT  1046

seq1  TAGCATGTATAAAAAAAGCTAGAAGTGAGAAAGGAATAAGATACTAAAAT  1098
      |||||||||| |||||||||||| |||||||||| ||||||||||||| |
seq2  TAGCATGTAT-AAAAAAGCTAGAGGTGAGAAAGG-ATAAGATACTAAATT  1094

seq1  CAAGTTCAAGCTCTTCAACTCT  1120
      ||||||| ||||||||| ||||
seq2  CAAGTTC-AGCTCTTCAGCTCT  1115

seq1: chr7_98172234_98173203
seq2: B6Ng01-013H08.g_64_1031 (reverse)

seq1  GACAAAGGGAGGGACAGGGGGATAGACAGAGGTAAGAGATGATAAATGAA  50
      ||||||||   ||||||||||||||||||||||||||||||| ||||| |
seq2  GACAAAGG--AGGACAGGGGGATAGACAGAGGTAAGAGATGA-AAATG-A  46

seq1  GAATGAGTGAAATAAGAAAAAAAAAGATAACCGTTATAAATGAGTTAAAT  100
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  GAATGAGTGAAATAAG-AAAAAAAAGATACCCGTTATAAATGAGTTAAAT  95

seq1  AGTAAATAGATCTCAATAATTCTAACATTGAAAGCTATAGGCAGCCTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATAGATCTCAATAATTCTAACATTGAAAGCTATAGGCAGCCTGCA  145

seq1  TACATAAAACAAGAGATTAAGATGATTAACTTTTAAAGGAGAAATTAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAAACAAGAGATTAAGATGATTAACTTTTAAAGGAGAAATTAAGA  195

seq1  AGAATGAATAACACAAGGAAAAATAATTTCATTAATATAAATAGAGACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAATAACACAAGGAAAAATAATTTCATTAATATAAATAGAGACTG  245

seq1  AGGAAGGGAAAAGAAT-AAAAATATGTGGTGGATTTTAGAGAACTTAGTA  299
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGGAAGGGAAAAGAATAAAAAATATGTGGTGGATTTTAGAGAACTTAGTA  295

seq1  GCTGAGAGTTTTCCTGAAGAAAGAACTGACTAAAGTTTAAATAAGAAAGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGAGTTTTCCTGAAGAAAGAACTGACTAAAGTTTAAATAAGAAAGT  345

seq1  TACT-AAGTCGTAAGTAAAACC-AAAAAACCTCACATCCAACCACAGCAC  397
      |||| ||||||||||||||||| |||||||||||||||||||||||||||
seq2  TACTAAAGTCGTAAGTAAAACCAAAAAAACCTCACATCCAACCACAGCAC  395

seq1  ATTGAAGCCATAAAACATAAAGGATCAATGACATCTTAGAAGATACAAGG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGCCATAAAACATAAAGGATCAATGACATCTTAGAAGATACAAGG  445

seq1  GATAAAAAGAATGTCCACTTGGGAAAAGTAAATAGGCTTTCTATGGCCAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAAAGAATGTCCACTTGGGAAAAGTAAATAGGCTTTCTATGGCCAA  495

seq1  GAGGTGGCTAGTCAGGCTGAGCTGTACAACAGAACAGAGATTTAATAGAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGGCTAGTCAGGCTGAGCTGTACAACAGAACAGAGATTTAATAGAT  545

seq1  GAAGAGATGGATAGATAGATGGATGGATGGATGGATGGATGGATGGATGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGATGGATAGATAGATGGATGGATGGATGGATGGATGGATGGATGG  595

seq1  ATGGATGGATGGATGGATAGATAGATAGATAGATAGATAGATAGATAGAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATGGATGGATGGATAGATAGATAGATAGATAGATAGATAGATAGAT  645

seq1  AGATAGGACAGCTATTCTACATATTAAATATAAAACTCAAAATTCATTTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGGACAGCTATTCTACATATTAAATATAAAACTCAAAATTCATTTA  695

seq1  TTGAGCAGCTCTTTCTACACACATCTGTATATTTACAGGTGATGCTAGAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCAGCTCTTTCTACACACATCTGTATATTTACAGGTGATGCTAGAG  745

seq1  GTACTGCTGATGGTACTAAGATGACTAGAGATGTTAGATGTGTGTGTGTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGCTGATGGTACTAAGATGACTAGAGATGTTAGATGTGTGTGTGTG  795

seq1  TGTGTAAGTAGCTCACAGTCTAAGGTGAAACCATAGAGGTATAGATAAGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAAGTAGCTCACAGTCTAAGGTGAAACCATAGAGGTATAGATAAGT  845

seq1  GAGTTTAATTCTTGCTAATGTTAAAGTAGGCATCCTGAGTACTGTTATTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTAATTCTTGCTAATGTTAAAGTAGGCATCCTGAGTACTGTTATTT  895

seq1  GATTTCCTATTCCCAGAAAGTAGAAAGACTTCTCCAATGTCACCTAGATT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCCTATTCCCAGAAAGTAGAAAGACTTCTCCAATGTCACCTAGATT  945

seq1  TGAACCTAATGGAACTGGAATTC  970
      |||||||||||||||||||||||
seq2  TGAACCTAATGGAACTGGAATTC  968