BAC Information

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BAC

Clone NameB6Ng01-014C10
Chromosome7 (Build37)
Map Location 111,706,685 - 111,707,432
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651
Downstream geneOlfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035, Olfr688, Olfr689, Olfr690, Olfr691, Olfr692, EG545989, 4632419K20Rik, Cnga4, EG244189, Cckbr, Prkcdbp, Smpd1, Apbb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014C10.bB6Ng01-014C10.g
ACCDH848777DH848778
length1,214747
definitionDH848777|Mus musculus domesticus DNA, BAC clone: B6Ng01-014C10, 5' end.DH848778|Mus musculus domesticus DNA, BAC clone: B6Ng01-014C10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagaaaggttctatttaaaatgaacaacactcttctcaatgatac
cttggtcaaggaaggaataaagaaagaaattaaagactttttagagttta
atgaaaataaagccacaacatacccaaacctatgggacaaattgaaagta
tttctaagagggaaactcatatctctgagtgcctccaagaagaaactgga
gagagcacacactaacagcttgacaacacatctaaaagctctagaaaaaa
aggaagaaaattgactcaagaggagtagacggcaggaaataatcaaactc
agatctgtatgataaaaacttcaagtctctaaagaaagaaataaaagaag
atctcagaagatgaaaaatctcccatgctcatggattggcaggatcaaca
ttgtaaaaatggctatcttgccaaaagcaatctacagattcaatgcaatc
cccatcaaaattctaactcaattcttcaacaaattagaaagaaaaatctg
caaattcatctgaaataagaaaaaacctaggatagcaaaaactcttctca
aggataaaagaacctctggtggaatcaccatgcctgacctaaagctttac
tacagagcaattgtaataaaaactgcatggtactggtatagcaccagaga
agtagaccaatggaatagaattgaaaacccagaaatgaacccacacacct
atggtcacttgatctttgacaagggatctttttccagtggaaaaaagaca
gcattttcaacaaatggtgctggcacaactggtggttatcatgtagaaga
atgcgaattgatccattcctatctccttgtactaagtttaaacctaagtg
gatcaaggaacttcacataaaaccagagacactgaaacttatggaagaga
aagtggggaaaagcctggagatatgggcaaaggggaaaaattcctgatag
acaccaatagcttgtgctgtagatcgaggattgaaaatgggacctcatga
aactgcaagcttctgcaagcaaaagacaccgtcataagacaaaaaggcac
caacagattgggaaaggatctttactatcttaatcagaataggactatat
ccattttttagactcagaggggtggactccagaattcataccataaaatg
gggccagctacagattacctgaggatctgaatgctgaaagaccactgaaa
aagggtccaatcct
gaattccctgctggaaggactaaactgaacactggggctgggtatttatg
gcttttgagcctgaattttatctgtatgagagacttactccacagaaatg
ggttactaccctattctcttacaaatgggctcaaccaaagttagtgttga
tttaccaaatggggggaggatgggagaaccatctggtgctgaagtttgga
aacacaggctgctttgaggcaggctgcaaagatggtatctaatgccagaa
atgtccccagagttttgttttctaaatttccaaaagggtttatttcagtt
caatggtactaattgaccatgcctgataaagttgcttacatccatggata
tagaagataacaaaaacaagaagtttaagaaattttgtactgggatgggg
aattactagttcttactctatggacctcctagatcaagcactcagcaatg
tctctgttggtgcttaggcctgattccccaaagggcagttccttggcatg
gaactactttgaacgaatgaagtgagaaaggcatcaggaagcaaaatgtt
ccttcagacttcttcccctttctcttttttcttcccccacgcatctctca
gaagcatgctgtgaaagatagatttttctttaaaggagaacatgaaaact
aaaattctattccaaagtaagaaataaaatctagataggtcatgcggtac
cttgcttgtagcatatcagaaaagcaacatttgaagaatgtggtatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_111706685_111707432
seq2: B6Ng01-014C10.g_66_812

seq1  GAATTCCCTGCTGGAAGGACTAAACTGAACACTGGGGCTGGGTATTTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGCTGGAAGGACTAAACTGAACACTGGGGCTGGGTATTTATG  50

seq1  GCTTTTGAGCCTGAATTTTATCTGTATGAGAGACTTACTCCACAGAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGAGCCTGAATTTTATCTGTATGAGAGACTTACTCCACAGAAATG  100

seq1  GGTTACTACCCTATTCTCTTACAAATGGGCTCAACCAAAGTTAGTGTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACTACCCTATTCTCTTACAAATGGGCTCAACCAAAGTTAGTGTTGA  150

seq1  TTTACCAAATGGGGGGAGGATGGGAGAACCATCTGGTGCTGAAGTTTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCAAATGGGGGGAGGATGGGAGAACCATCTGGTGCTGAAGTTTGGA  200

seq1  AACACAGGCTGCTTTGAGGCAGGCTGCAAAGATGGTATCTAATGCCAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGGCTGCTTTGAGGCAGGCTGCAAAGATGGTATCTAATGCCAGAA  250

seq1  ATGTCCCCAGAGTTTTGTTTTCTAAATTTCCAAAAGGGTTTATTTCAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCCCAGAGTTTTGTTTTCTAAATTTCCAAAAGGGTTTATTTCAGTT  300

seq1  CAATGGTACTAATTGACCATGCCTGATAAAGTTGCTTACATCCATGGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGTACTAATTGACCATGCCTGATAAAGTTGCTTACATCCATGGATA  350

seq1  TAGAAGATAACAAAAACAAGAAGTTTAAGAAATTTTGTACTGGGATGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGATAACAAAAACAAGAAGTTTAAGAAATTTTGTACTGGGATGGGG  400

seq1  AATTACTAGTTCTTACTCTATGGACCTCCTAGATCAAGCACTCAGCAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTAGTTCTTACTCTATGGACCTCCTAGATCAAGCACTCAGCAATG  450

seq1  TCTCTGTTGGTGCTTAGGCCTGATTCCCCAAAGGGCAGTTCCTTGGCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTTGGTGCTTAGGCCTGATTCCCCAAAGGGCAGTTCCTTGGCATG  500

seq1  GAACTACTTTGAACGAATGAAGTGAGAAAGGCATCAGGAAGCAAAATGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTACTTTGAACGAATGAAGTGAGAAAGGCATCAGGAAGCAAAATGTT  550

seq1  CCTTCAGACTTCTTCCCCTTTCTCTTTTTTCTTCCCCCACGCATCTCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGACTTCTTCCCCTTTCTCTTTTTTCTTCCCCCACGCATCTCTCA  600

seq1  GAAGCATGCTGTGAAAGATAGATTTTTCTTTAAAGGAGAACATGAAAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCATGCTGTGAAAGATAGATTTTTCTTTAAAGGAGAACATGAAAACT  650

seq1  AAAATTCTATTCCAAAGTAAGAAATAAAATCTAGATAGGTCATGCGGTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCTATTCCAAAGTAAGAAATAAAATCTAGATAGGTCATGCGGTAC  700

seq1  CTTGCTTGTAAGCATATCAGAAAAGCCACATTTGAGAAATGTGGTATC  748
      ||||||||| |||||||||||||||| ||||||||  |||||||||||
seq2  CTTGCTTGT-AGCATATCAGAAAAGCAACATTTGAAGAATGTGGTATC  747