BAC Information

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BAC

Clone NameB6Ng01-014H18
Chromosome7 (Build37)
Map Location 83,899,549 - 84,032,609
singlet/doubletdoublet
Overlap geneEG244071
Upstream geneKlhl25, LOC100042210, LOC434200
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014H18.bB6Ng01-014H18.g
ACCDH849012DH849013
length1,119619
definitionDH849012|Mus musculus domesticus DNA, BAC clone: B6Ng01-014H18, 5' end.DH849013|Mus musculus domesticus DNA, BAC clone: B6Ng01-014H18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,031,478 - 84,032,609)(83,899,549 - 83,900,167)
sequence
gaattctttagacttgaattagaaaaggcatttctttgatagatttcttc
ttgttctcgtttacaggcaactaatccttactgcattggatcaaacagac
gggcacaatcaattcagggaaagcaagcaatgccagttctgctcaatctt
ccctcaatgagcagctgaggatggaggcgggagaaaggtaagggagactc
atctgtttcctcacccaagattgctcagccaaggaaaaaaatgagaagac
aattggaaatataagttgaggcgggtgaatacacttgctatcagaggggg
agtctgaaaactgagataaagtcaaacatgcaaatcgtgtggttgctgaa
aggcatggaaggaaggttccgatggaaggagtgatgcccaaccaaagggt
aaagggtggcaatgtctcctgggcaggggctggcactggattaacttaag
tctctgttgtctgggttctatattactctgtgctgagcaagttaattatt
gtatttagctaattaagtcccagagaaatggaggctttccaaagttgttt
tcatgtacgctgctagatctttttaggcttgactggccatttagtgagct
gctacatgaagtgcattttaactgtgacatgcagaaaactaatgaaaatt
agctggaaataaaagtcttctacatattaacacttttgcctttgctgttg
gaggtaaagtgtatggttacatgcttcctcatttatcagtagacaatgaa
tcatatataggtcccactgctcaaactgtagtctatgatttagcctcttt
gggactgcgatgacttctggtcctctagccttgtacatagtatcatttct
ccacattttgtccccaaatttatcctgctcaagaaataaagcatttgtct
acaggaaagtgcatcaaagctcatttgtatacagttacctacaccttgac
tcattactgatgcccaggtctcagatatccagaattctctgcatgtaaag
tatttctcttgacatataaacatcttttcccagatgacctgtttgaaaac
agaacacttgcaccagcatcagaattcaacagtgttacactccttcattt
tatggtgagcaatagctct
gaattcttcttccatcaaattataggcacacagacagatgaacaaaaatt
taaaataaaaactaagtacatgaatagaaggacgagttgtgaggtaatgt
gtacaggactgattgcttctctgtggtacaggattgattagattatcctg
ggcgacttccatagactttttattttactttttttttgaggtataaatct
aatgatatgtgttaggaccttacatctagaaaatcatctcatgagaaaac
ttttagtttagatattatttctagaaaacttggaagaaatacaagccaga
aattctgttatgattaaaagttgaatccgaaagaacctgcatgtccaggt
gaatgatagagtactgagttgagataaactgaatgttggctttgtgcaac
actgctaagcatgcaatccctttttgtgacattttcagtcattgattctc
ttcatagattgctatttctcaggagttattagagataagaataattcata
ctcctcccacagtgccaatgtcaaagaccaatgtaattctctacatgcct
ttatttatatatatatatatatatatatatatatatatttatataatttt
tggacgggggtgttgttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_84031478_84032609
seq2: B6Ng01-014H18.b_44_1162 (reverse)

seq1  AGAGCTATTGCTCAACATAAAAATAGAGGAGTGTCACACTGTTGATATCT  50
      |||||||||||||| ||| |||||  |||||||| |||||||||| ||  
seq2  AGAGCTATTGCTCACCAT-AAAATGAAGGAGTGTAACACTGTTGA-ATTC  48

seq1  TGATGCTTGGTGCAAGTG-TCTGTTTTTCAAACAGTGTCATTCTGGG-AA  98
      |||||| ||||||||||| |||| ||||||||||| |||| |||||| ||
seq2  TGATGC-TGGTGCAAGTGTTCTG-TTTTCAAACAG-GTCA-TCTGGGAAA  94

seq1  AGATGTTTTATTATTGGTCAAGAGAAATTACTTTACATGGCAGAGAATGT  148
      ||||||    ||||  ||||||||||| |||||||||| ||||||||| |
seq2  AGATGT----TTATATGTCAAGAGAAA-TACTTTACAT-GCAGAGAAT-T  137

seq1  CTGGATATCTGAGACCTGGGCATCAGTAATGAGTCAAGGTGTAGGTAACT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATATCTGAGACCTGGGCATCAGTAATGAGTCAAGGTGTAGGTAACT  187

seq1  GTTATACAAATGAGCTTTTGATGCACTTTCCTGTAGACAAATGCTTTATT  248
      | ||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  G-TATACAAATGAGC-TTTGATGCACTTTCCTGTAGACAAATGCTTTATT  235

seq1  TCTTGAGCAGGATAAATTTGGGGACAAAATGTGGAGAAATGATACTATGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGCAGGATAAATTTGGGGACAAAATGTGGAGAAATGATACTATGT  285

seq1  ACAAGGCTAGAGGACCAGAAGTCATCGCAGTCCCAAAGAGGCTAAATCAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGCTAGAGGACCAGAAGTCATCGCAGTCCCAAAGAGGCTAAATCAT  335

seq1  AGACTACAGTTTGAGCAGTGGGACCTATATATGATTCATTGTCTACTGAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTACAGTTTGAGCAGTGGGACCTATATATGATTCATTGTCTACTGAT  385

seq1  AAATGAGGAAGCATGTAACCATACACTTTACCTCCAACAGCAAAGGCAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGGAAGCATGTAACCATACACTTTACCTCCAACAGCAAAGGCAAA  435

seq1  AGTGTTAATATGTAGAAGACTTTTATTTCCAGCTAATTTTCATTAGTTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTAATATGTAGAAGACTTTTATTTCCAGCTAATTTTCATTAGTTTT  485

seq1  CTGCATGTCACAGTTAAAATGCACTTCATGTAGCAGCTCACTAAATGGCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATGTCACAGTTAAAATGCACTTCATGTAGCAGCTCACTAAATGGCC  535

seq1  AGTCAAGCCTAAAAAGATCTAGCAGCGTACATGAAAACAACTTTGGAAAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAGCCTAAAAAGATCTAGCAGCGTACATGAAAACAACTTTGGAAAG  585

seq1  CCTCCATTTCTCTGGGACTTAATTAGCTAAATACAATAATTAACTTGCTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATTTCTCTGGGACTTAATTAGCTAAATACAATAATTAACTTGCTC  635

seq1  AGCACAGAGTAATATAGAACCCAGACAACAGAGACTTAAGTTAATCCAGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGAGTAATATAGAACCCAGACAACAGAGACTTAAGTTAATCCAGT  685

seq1  GCCAGCCCCTGCCCAGGAGACATTGCCACCCTTTACCCTTTGGTTGGGCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCCCCTGCCCAGGAGACATTGCCACCCTTTACCCTTTGGTTGGGCA  735

seq1  TCACTCCTTCCATCGGAACCTTCCTTCCATGCCTTTCAGCAACCACACGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCCTTCCATCGGAACCTTCCTTCCATGCCTTTCAGCAACCACACGA  785

seq1  TTTGCATGTTTGACTTTATCTCAGTTTTCAGACTCCCCCTCTGATAGCAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATGTTTGACTTTATCTCAGTTTTCAGACTCCCCCTCTGATAGCAA  835

seq1  GTGTATTCACCCGCCTCAACTTATATTTCCAATTGTCTTCTCATTTTTTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATTCACCCGCCTCAACTTATATTTCCAATTGTCTTCTCATTTTTTT  885

seq1  CCTTGGCTGAGCAATCTTGGGTGAGGAAACAGATGAGTCTCCCTTACCTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGCTGAGCAATCTTGGGTGAGGAAACAGATGAGTCTCCCTTACCTT  935

seq1  TCTCCCGCCTCCATCCTCAGCTGCTCATTGAGGGAAGATTGAGCAGAACT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCGCCTCCATCCTCAGCTGCTCATTGAGGGAAGATTGAGCAGAACT  985

seq1  GGCATTGCTTGCTTTCCCTGAATTGATTGTGCCCGTCTGTTTGATCCAAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTGCTTGCTTTCCCTGAATTGATTGTGCCCGTCTGTTTGATCCAAT  1035

seq1  GCAGTAAGGATTAGTTGCCTGTAAACGAGAACAAGAAGAAATCTATCAAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTAAGGATTAGTTGCCTGTAAACGAGAACAAGAAGAAATCTATCAAA  1085

seq1  GAAATGCCTTTTCTAATTCAAGTCTAAAGAATTC  1132
      ||||||||||||||||||||||||||||||||||
seq2  GAAATGCCTTTTCTAATTCAAGTCTAAAGAATTC  1119

seq1: chr7_83899549_83900167
seq2: B6Ng01-014H18.g_68_686

seq1  GAATTCTTCTTCCATCAAATTATAGGCACACAGACAGATGAACAAAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTCCATCAAATTATAGGCACACAGACAGATGAACAAAAATT  50

seq1  TAAAATAAAAACTAAGTACATGAATAGAAGGACGAGTTGTGAGGTAATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAAAACTAAGTACATGAATAGAAGGACGAGTTGTGAGGTAATGT  100

seq1  GTACAGGACTGATTGCTTCTCTGTGGTACAGGATTGATTAGATTATCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGGACTGATTGCTTCTCTGTGGTACAGGATTGATTAGATTATCCTG  150

seq1  GGCGACTTCCATAGACTTTTTATTTTACTTTTTTTTTGAGGTATAAATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGACTTCCATAGACTTTTTATTTTACTTTTTTTTTGAGGTATAAATCT  200

seq1  AATGATATGTGTTAGGACCTTACATCTAGAAAATCATCTCATGAGAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATATGTGTTAGGACCTTACATCTAGAAAATCATCTCATGAGAAAAC  250

seq1  TTTTAGTTTAGATATTATTTCTAGAAAACTTGGAAGAAATACAAGCCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTTTAGATATTATTTCTAGAAAACTTGGAAGAAATACAAGCCAGA  300

seq1  AATTCTGTTATGATTAAAAGTTGAATCCGAAAGAACCTGCATGTCCAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGTTATGATTAAAAGTTGAATCCGAAAGAACCTGCATGTCCAGGT  350

seq1  GAATGATAGAGTACTGAGTTGAGATAAACTGAATGTTGGCTTTGTGCAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATAGAGTACTGAGTTGAGATAAACTGAATGTTGGCTTTGTGCAAC  400

seq1  ACTGCTAAGCATGCAATCCCTTTTTGTGACATTTTCAGTCATTGATTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTAAGCATGCAATCCCTTTTTGTGACATTTTCAGTCATTGATTCTC  450

seq1  TTCATAGATTGCTATTTCTCAGGAGTTATTAGAGATAAGAATAATTCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGATTGCTATTTCTCAGGAGTTATTAGAGATAAGAATAATTCATA  500

seq1  CTCCTCCCACAGTGCCAATGTCAAAGACCAATGTAATTCTCTACATGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCCACAGTGCCAATGTCAAAGACCAATGTAATTCTCTACATGCCT  550

seq1  TTATTTATATATATATATATATATATATATATATATATTTATATAATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATATATATATATATATATATATATATATATATTTATATAATTTT  600

seq1  TGGACGGGGGTGTTGTTGA  619
      |||||||||||||||||||
seq2  TGGACGGGGGTGTTGTTGA  619