BAC Information

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BAC

Clone NameB6Ng01-014K10
Chromosome7 (Build37)
Map Location 47,724,682 - 47,871,980
singlet/doubletdoublet
Overlap genenone
Upstream gene9430025M13Rik, LOC100038985, 3000002G13Rik, EG215208, LOC100039133, LOC100039050, EG668540, 4930558N11Rik, EG628161
Downstream geneLOC100039094, 2900093B09Rik, 4930433I11Rik, EG233164, LOC668555, EG627987, LOC100039269, LOC545955, EG628304, LOC668561, EG434172, LOC100039221, LOC668565, AI987944, EG269902, LOC100039375, EG628359, 2610021A01Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014K10.bB6Ng01-014K10.g
ACCDH849135DH849136
length1,195737
definitionDH849135|Mus musculus domesticus DNA, BAC clone: B6Ng01-014K10, 5' end.DH849136|Mus musculus domesticus DNA, BAC clone: B6Ng01-014K10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(47,870,771 - 47,871,980)(47,724,682 - 47,725,415)
sequence
gaattccacaaacctcctgttttcacagcaggaaaggaacatgtctttgt
gtttttatacacagtggctccattcaatcgaaatgaccaatcttattttc
attataatctattattgcaggttttctcaggacctacctggcttcaggta
aaggcattctttaggggtctcatctaatatggatccccaaaggggaacca
atagggatcctgagacttagtgatgtccagaaatgaacccagctattcct
agctaccagttccttttttattagatattttctttgtttacatatcaaat
gttatcccctttcctggtctcccaccaaaactccctccccttacctcctc
ccccctccccctgctcaccagcctaccagtttttatcaaacaggacacat
gtgttttggatgctctggtgctcctgaagtcttattctttcttcatagaa
tgccattttgtatgagtgcataccagaagtttgattcccatacccatgca
ccttctccatggaggtgtgcttgaccccctgggaagcagcaggcaacatc
ttcagagcccattactctgtacactcaaagtcctggttgcaaagattgac
agctggacctcagaatcaagcactgtttctatttccagcagcatcacttg
ctccctgctgagactgagacctctgtttcttccttgataatgatatggat
gccagcagtttttctcatgaacctgtcataggtggtaaatgacttgacac
gtaaaaacacccagcgtatacctgactcatagtacgcatccacttctcat
tctttattgcaatttttctttttactaacactaacattatgtcagactaa
tagagtcattttatgcttctatctcccctacattctcctggagaatcgga
ttatggtgactttatgtcttcaccttcaaagtgcacttagccacatagtt
gctatcagtctgtgttttgagtaacccttggaatccatactggaaaccct
ccaaggaaagtatcttgctcatctttatgatttattccattctcagtctt
gctatggagtgacactgagtgtggacttaatctaagtgtcaaatagatgg
cttctactgagtaagctctatgtactgtcctttgtcctttccttaatttt
agctagagggagtgttcacacaccaattcccaagtacctctttga
gaattcactccttgtcactcccattctcggggtgtaatagtggggtgatg
ggcaagcaacgaatcgggagctgtcacgccatatcaggtgctgaaacgtc
acgctgcgggttataaaagcagcgccatttttccggttcgggatcttcct
gagaagcaagcaataaagcttttgccgcggaagattctggtttgttgcgt
ctttcttgccggtcgagcgggacgcaataccttagctcactccttggcca
ttacacacagagaaaattcctaattccaggacttcatggtcttcattcca
gaaatttccccaaaagctaaccaatttttttcttttctaagactatgcag
aaaggtatgcacatacacacacacacacacacacacacacacacacacac
acacacacacggtgggattgaggagaaaccaagagccttatcttccctgg
aaattaagcaatattcattcagtctatagaaaagtcgtccatgttttttt
tccatgttaatctaaattaaatctgcaaatggaatgagggggctcctgtg
acaagaagccaacctcatctagtagcctgcccagcgctcaggtgtaagtg
agtgccttgggtgagcagaggtgttatgaaagcaatgtgctgaatttggg
gcatgcatgtcagtttcagaggggggcctttcagacatgtttatgtttgt
ttatttttaatctctctctgcttgtgtgtgtgttgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_47870771_47871980
seq2: B6Ng01-014K10.b_43_1237 (reverse)

seq1  TCAAAGAGGTTACTTGGGAGCTGG-GTGTGGTAACCACAATCCCTCTAGG  49
      ||||||||| |||||||||  ||| |||||      ||| ||||||||| 
seq2  TCAAAGAGG-TACTTGGGAATTGGTGTGTG-----AACACTCCCTCTAGC  44

seq1  ACAATATAATGAGAAGAGAACAAAAGACATGTACATTAGGAGCCTCACTC  99
        ||   | | || | || ||||| |||| ||||||   ||| || ||||
seq2  TAAA---ATTAAGGAAAGGACAAAGGACA-GTACAT--AGAG-CTTACTC  87

seq1  AGTAGAAGCCATCTATATGACACTGTAGATTATGT-CACACTCAGTGGTC  148
      |||||||||||||||| ||||||| ||||||| || |||||||||| |||
seq2  AGTAGAAGCCATCTATTTGACACT-TAGATTAAGTCCACACTCAGT-GTC  135

seq1  ACTCCATAGGCAAGGACCTGAGAATGGAATAAATCATAAAGATTGAGCCA  198
      |||||||| |||||   ||||||||||||||||||||||||| |||| ||
seq2  ACTCCATA-GCAAG--ACTGAGAATGGAATAAATCATAAAGA-TGAG-CA  180

seq1  AGATACTTTCCTTGGAGGGTTTCCAGTATGGATTCCAAGGGGTTACTCAA  248
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGATACTTTCCTTGGAGGGTTTCCAGTATGGATTCCAA-GGGTTACTCAA  229

seq1  CACACAGACTGATAGCAACTATGT-GCTAAGTGCACTTTGGAGGTGAAGA  297
       ||||||||||||||||||||||| ||||||||||||||| |||||||||
seq2  AACACAGACTGATAGCAACTATGTGGCTAAGTGCACTTTGAAGGTGAAGA  279

seq1  CATAAAGTCACCATAATCCGATTCTC--AGAGAATTGTAGGGGAGATAGA  345
      ||||||||||||||||||||||||||   ||||| |||||||||||||||
seq2  CATAAAGTCACCATAATCCGATTCTCCAGGAGAA-TGTAGGGGAGATAGA  328

seq1  AGCAT-AAATGACTCTATTAGTCTGACATAATGTTAGTGTTAGTAAAAAG  394
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAAAATGACTCTATTAGTCTGACATAATGTTAGTGTTAGTAAAAAG  378

seq1  AAAAATTGCAATAAAGAATGAGAAGTGGATGCGTACTATGAGTCAGGTAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTGCAATAAAGAATGAGAAGTGGATGCGTACTATGAGTCAGGTAT  428

seq1  ACGCTGGGTGTTTTTACGTGTCAAGTCATTTACCACCTATGACAGGTTCC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ACGCTGGGTGTTTTTACGTGTCAAGTCATTTACCACCTATGACAGGTTCA  478

seq1  TGAGAAAAACTGCTGGCATCCATATCATTATCAAGGAAGAAACAGAGGTC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAAACTGCTGGCATCCATATCATTATCAAGGAAGAAACAGAGGTC  528

seq1  TCAGTCTCAGCAGGGAGCAAGTGATGCTGCTGG-AATAGAAACAGTGCTT  593
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCAGTCTCAGCAGGGAGCAAGTGATGCTGCTGGAAATAGAAACAGTGCTT  578

seq1  GATTCTGAGGTCCAGCTGTCAATCTTTGCAACCAGGACTTTGAGTGTACA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTGAGGTCCAGCTGTCAATCTTTGCAACCAGGACTTTGAGTGTACA  628

seq1  GAGTAATGGGCTCTGAAGATGTTGCCTGCTGCTTCCCAGGGGGTCAAGCA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAATGGGCTCTGAAGATGTTGCCTGCTGCTTCCCAGGGGGTCAAGCA  678

seq1  CACCTCCATGGAGAAGGTGCATGGGTATGGGAATCAAACTTCTGGTATGC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCATGGAGAAGGTGCATGGGTATGGGAATCAAACTTCTGGTATGC  728

seq1  ACTCATACAAAATGGCATTCTATGAAGAAAGAATAAGACTTCAGGAGCAC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATACAAAATGGCATTCTATGAAGAAAGAATAAGACTTCAGGAGCAC  778

seq1  CAGAGCATCCAAAACACATGTGTCCTGTTTGATAAAAACTGGTAGGCTGG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCATCCAAAACACATGTGTCCTGTTTGATAAAAACTGGTAGGCTGG  828

seq1  TGAGCAGGGGGAGGGGGGAGGAGGTAAGGGGAGGGAGTTTTGGTGGGAGA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAGGGGGAGGGGGGAGGAGGTAAGGGGAGGGAGTTTTGGTGGGAGA  878

seq1  CCAGGAAAGGGGATAACATTTGATATGTAAACAAAGAAAATATCTAATAA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAAAGGGGATAACATTTGATATGTAAACAAAGAAAATATCTAATAA  928

seq1  AAAAGGAACTGGTAGCTAGGAATAGCTGGGTTCATTTCTGGACATCACTA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAACTGGTAGCTAGGAATAGCTGGGTTCATTTCTGGACATCACTA  978

seq1  AGTCTCAGGATCCCTATTGGTTCCCCTTTGGGGATCCATATTAGATGAGA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCAGGATCCCTATTGGTTCCCCTTTGGGGATCCATATTAGATGAGA  1028

seq1  CCCCTAAAGAATGCCTTTACCTGAAGCCAGGTAGGTCCTGAGAAAACCTG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTAAAGAATGCCTTTACCTGAAGCCAGGTAGGTCCTGAGAAAACCTG  1078

seq1  CAATAATAGATTATAATGAAAATAAGATTGGTCATTTCGATTGAATGGAG  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATAGATTATAATGAAAATAAGATTGGTCATTTCGATTGAATGGAG  1128

seq1  CCACTGTGTATAAAAACACAAAGACATGTTCCTTTCCTGCTGTGAAAACA  1193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTGTATAAAAACACAAAGACATGTTCCTTTCCTGCTGTGAAAACA  1178

seq1  GGAGGTTTGTGGAATTC  1210
      |||||||||||||||||
seq2  GGAGGTTTGTGGAATTC  1195

seq1: chr7_47724682_47725415
seq2: B6Ng01-014K10.g_71_807

seq1  GAATTCACTCCTAGTCACTCCCATTCTCGGGGTGTAATAGTGGGGTGATG  50
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCCTTGTCACTCCCATTCTCGGGGTGTAATAGTGGGGTGATG  50

seq1  GGCAAGCAACGAATCGGGAGCTGTCACGCCATATCAGGTGCTGAAACGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGCAACGAATCGGGAGCTGTCACGCCATATCAGGTGCTGAAACGTC  100

seq1  ACGCTGCGGGTTATAAAAGCAGCGCCATTTTTCCGGTTCGGGATCTTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTGCGGGTTATAAAAGCAGCGCCATTTTTCCGGTTCGGGATCTTCCT  150

seq1  GAGAAGCAAGCAATAAAGCTTTTGCCGCGGAAGATTCTGGTTTGTTGCGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCAAGCAATAAAGCTTTTGCCGCGGAAGATTCTGGTTTGTTGCGT  200

seq1  CTTTCTTGCCGGTCGAGCGGGACGCAATACCTTAGCTCACTCCTTGGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTGCCGGTCGAGCGGGACGCAATACCTTAGCTCACTCCTTGGCCA  250

seq1  TTACACACAGAGAAAATTCCTAATTCCAGGACTTCATGGTCTTCATTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACACAGAGAAAATTCCTAATTCCAGGACTTCATGGTCTTCATTCCA  300

seq1  GAAATTTCCCCAAAAGCTAACCAATTTTTTTCTTTTCTAAGACTATGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTCCCCAAAAGCTAACCAATTTTTTTCTTTTCTAAGACTATGCAG  350

seq1  AAAGGTATGCACATACACACACACACACACACACACACACACACACACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTATGCACATACACACACACACACACACACACACACACACACACAC  400

seq1  ACACACACACGGTGGGATTGAGGAGAAACCAAGAGCCTTATCTTCCCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACGGTGGGATTGAGGAGAAACCAAGAGCCTTATCTTCCCTGG  450

seq1  AAATTAAGCAATATTCATTCAGTCTATAGAAAAGTCGTCCATGTTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAGCAATATTCATTCAGTCTATAGAAAAGTCGTCCATGTTTTTTT  500

seq1  TCCATGTTAATCTAAATTAAATCTGCAAATGGAATGA-GGGGCTCCTGTG  549
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCCATGTTAATCTAAATTAAATCTGCAAATGGAATGAGGGGGCTCCTGTG  550

seq1  ACAAGAAGCCAACCTCATCTAGTAGCCTGCCCAGCGCTCAGGTGTAAGTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAAGCCAACCTCATCTAGTAGCCTGCCCAGCGCTCAGGTGTAAGTG  600

seq1  AGTGCCTTGGGTGAGCAGAGGTGTTATG-AAGCAATGTGCTGAATTTGGG  648
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AGTGCCTTGGGTGAGCAGAGGTGTTATGAAAGCAATGTGCTGAATTTGGG  650

seq1  GCATGCATGTCAGTTTCAGA-GGGGGCCTTTCAGACATGTTTATG-TTGT  696
      |||||||||||||||||||| |||||||||||||||||||||||| ||||
seq2  GCATGCATGTCAGTTTCAGAGGGGGGCCTTTCAGACATGTTTATGTTTGT  700

seq1  TTATTTTTAATCTCTCTCTGCGTGTGTGTGTGTGTGTG  734
      ||||||||||||||||||||| ||||||||||| ||||
seq2  TTATTTTTAATCTCTCTCTGCTTGTGTGTGTGT-TGTG  737