BAC Information

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BAC

Clone NameB6Ng01-014L02
Chromosome7 (Build37)
Map Location 109,497,444 - 109,498,674
singlet/doubletsinglet
Overlap geneStim1
Upstream geneCentd2, Pde2a, Art2a, EG630138, Art2b, Clpb, Phox2a, Inppl1, Folr2, Folr1, 3200002M19Rik, F930017I19Rik, 2400001E08Rik, Lrrc51, LOC667222, Numa1, Il18bp, Rnf121, Trpc2, Art5, Art1, Chrna10, Nup98, Frag1, Rhog
Downstream geneRrm1, Olfr543, Olfr544, Olfr545, LOC667284, Olfr547, Olfr548-ps1, Olfr549, Trim21, LOC384699, Olfr550, Olfr551, Olfr552, Olfr553, Olfr554, LOC100040840, Olfr555, Olfr556, Trim68, Olfr557, Olfr558, Olfr33, Olfr559, Olfr78, Olfr560, Olfr561, Olfr562-ps1, Olfr563-ps1, Olfr564, Olfr565-ps1, Olfr566, GA_x5J8B7W5P47-379997-380552, Olfr567-ps1, Olfr568, Olfr569, Olfr570, Olfr571, Olfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582, Olfr583, Olfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1, Olfr591, Olfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014L02.b
ACCDH849164
length1,216
definitionDH849164|Mus musculus domesticus DNA, BAC clone: B6Ng01-014L02, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgcctcctgctgagaagaactgggtctcttcttggacacgagg
acatggtgttctaataagtgcaggaacatctctcaaattggctggattgt
acacatcccagtgacctgatctttctccttggtgactagacttgctatgt
ctttcactggggacctttcccctctcaacactaaatctgtatctatagtc
ttcatatctctagtcagtccactcatctactctgccttgctcatctccac
tttagtttccttgtaactttgtctctgaaacttctgtttcttgaccagat
ctgagagtcttcccagggttaatattctcagtctgaaacttttgatctct
ttctgagggcaagggtttatctcttcattcagttagccagccagcatttg
ctgatttttgcttgacatggagaatgttagcagtgatgacagactgaact
ctcgggaataaaatgagttaaacttggttcttgcccttttctggatgtgg
catgtgaacaacgcgggacatgaaaattcatacgctggaactatgtacaa
agtgctttgaagcatgggacagtgagcagtaaatgactaactctgccttg
gggagagaactttgaatttcctctggaatagtaagaatagtaagaggctg
cttatgtcttaaaggactcggctctctcattccatcatgtgagctccaga
tgtctaactctgaattccctcctgaaggttgaggagtgagactgaaagtc
tcttaaccttggcttggcctttctatgaccagctcccctcctgatgctgc
ttagaggttgcattaggatatgccaccagcagagaaagatacccttatca
ttttgaaaaattacaaggattctaggagatatatgtctgaaaatagcaat
ggagattaatatgtatgcacatatgtaaatacatgctgtgctcaagggac
ataataaagctctgcttcatggagagactgatggttatctgtgaaacgca
ccagaaaggcatcagaacccctggaactggagttacaaatagttctagta
cccatggagggtgctgagagtcaactcagtctctggagaacagccagtgc
ctctaaactggggagcttcttctcagcccccctgaaccctctagactagt
cttattgaaatttccagcgaactgaactggtgaagagctcggcctctggc
atctatggttaaggct
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_109497444_109498674
seq2: B6Ng01-014L02.b_48_1263

seq1  GAATTCCTGCCTCCTGCTGAGAAGAACTGGGTCTCTTCTTGGACACGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCCTCCTGCTGAGAAGAACTGGGTCTCTTCTTGGACACGAGG  50

seq1  ACATGGTGTTCTAATAAGTGCAGGAACATCTCTCAAATTGGCTGGATTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTGTTCTAATAAGTGCAGGAACATCTCTCAAATTGGCTGGATTGT  100

seq1  ACACATCCCAGTGACCTGATCTTTCTCCTTGGTGACTAGACTTGCTATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCCCAGTGACCTGATCTTTCTCCTTGGTGACTAGACTTGCTATGT  150

seq1  CTTTCACTGGGGACCTTTCCCCTCTCAACACTAAATCTGTATCTATAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACTGGGGACCTTTCCCCTCTCAACACTAAATCTGTATCTATAGTC  200

seq1  TTCATATCTCTAGTCAGTCCACTCATCTACTCTGCCTTGCTCATCTCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATCTCTAGTCAGTCCACTCATCTACTCTGCCTTGCTCATCTCCAC  250

seq1  TTTAGTTTCCTTGTAACTTTGTCTCTGAAACTTCTGTTTCTTGACCAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTTCCTTGTAACTTTGTCTCTGAAACTTCTGTTTCTTGACCAGAT  300

seq1  CTGAGAGTCTTCCCAGGGTTAATATTCTCAGTCTGAAACTTTTGATCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGTCTTCCCAGGGTTAATATTCTCAGTCTGAAACTTTTGATCTCT  350

seq1  TTCTGAGGGCAAGGGTTTATCTCTTCATTCAGTTAGCCAGCCAGCATTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGGGCAAGGGTTTATCTCTTCATTCAGTTAGCCAGCCAGCATTTG  400

seq1  CTGATTTTTGCTTGACATGGAGAATGTTAGCAGTGATGACAGACTGAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTTTGCTTGACATGGAGAATGTTAGCAGTGATGACAGACTGAACT  450

seq1  CTCGGGAATAAAATGAGTTAAACTTGGTTCTTGCCCTTTTCTGGATGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGGAATAAAATGAGTTAAACTTGGTTCTTGCCCTTTTCTGGATGTGG  500

seq1  CATGTGAACAACGCGGGACATGAAAATTCATACGCTGGAACTATGTACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGAACAACGCGGGACATGAAAATTCATACGCTGGAACTATGTACAA  550

seq1  AGTGCTTTGAAGCATGGGACAGTGAGCAGTAAATGACTAACTCTGCCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTTGAAGCATGGGACAGTGAGCAGTAAATGACTAACTCTGCCTTG  600

seq1  GGGAGAGAACTTTGAATTTCCTCTGGAATAGTAAGAATAGTAAGAGGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGAACTTTGAATTTCCTCTGGAATAGTAAGAATAGTAAGAGGCTG  650

seq1  CTTATGTCTTAAAGGACTCGGCTCTCTCATTCCATCATGTGAGCTCCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGTCTTAAAGGACTCGGCTCTCTCATTCCATCATGTGAGCTCCAGA  700

seq1  TGTCTAACTCTGAATTCCCTCCTGAAGGTTGAGGAGTGAGACTGAAAGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAACTCTGAATTCCCTCCTGAAGGTTGAGGAGTGAGACTGAAAGTC  750

seq1  TCTTAACCTTGGCTTGGCCTTTCTATGACCAGCTCCCCTCCTGATGCTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAACCTTGGCTTGGCCTTTCTATGACCAGCTCCCCTCCTGATGCTGC  800

seq1  TTAGAGGTTGCATTAGGATATGCCACCAGCAGAGAAAGATACCCTTATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGGTTGCATTAGGATATGCCACCAGCAGAGAAAGATACCCTTATCA  850

seq1  TTTTGAAAAATTACAAGGATTCTAGGAGATATATGTCTGAAAATAGCAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAAAATTACAAGGATTCTAGGAGATATATGTCTGAAAATAGCAAT  900

seq1  GGAGATTAATATGTATGCACATATGTAAATACATGCTGTGCTCAAGGGAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATTAATATGTATGCACATATGTAAATACATGCTGTGCTCAAGGGAC  950

seq1  ATAATAAAGCTCTGCTTCATGGAGAAGACTGATGGTTATCTGAAGGAAAC  1000
      |||||||||||||||||||||||| |||||||||||||||||   |||||
seq2  ATAATAAAGCTCTGCTTCATGGAG-AGACTGATGGTTATCTG--TGAAAC  997

seq1  GCACCAGAAAGGGCATCAGAACCCCTGGAACTGGAGTTAACAAATAGTTC  1050
      |||||||||| ||||||||||||||||||||||||||| |||||||||||
seq2  GCACCAGAAA-GGCATCAGAACCCCTGGAACTGGAGTT-ACAAATAGTTC  1045

seq1  TTAGTACCCATGGA-GGTGCTGAGAGTCAAACCTCAGTCCTCTGGAAGAA  1099
       ||||||||||||| |||||||||||||||  |||||| |||||| ||||
seq2  -TAGTACCCATGGAGGGTGCTGAGAGTCAA--CTCAGT-CTCTGG-AGAA  1090

seq1  CAGCCAGTG-CTCTTAACTGGTGAGCTTTCTTCTCAGCCCCCCTGACCCC  1148
      ||||||||| |||| |||||| |||| ||||||||||||||||||| |||
seq2  CAGCCAGTGCCTCTAAACTGGGGAGC-TTCTTCTCAGCCCCCCTGAACCC  1139

seq1  TCTAAGACTAGGTCTTATTTTGAATTTCAGGCTGACTTGAAACTGGTGGT  1198
      ||| |||||| |||||| ||  ||||||  ||  |||   ||||||||  
seq2  TCT-AGACTA-GTCTTA-TTGAAATTTCCAGCGAACT--GAACTGGTGAA  1184

seq1  GAGCT--GCTTCCTGGCATTCTATGGTTATAGGCT  1231
      |||||  || | |||||| |||||||||| |||||
seq2  GAGCTCGGCCT-CTGGCA-TCTATGGTTA-AGGCT  1216