BAC Information

Click to search

BAC

Clone NameB6Ng01-015B24
Chromosome7 (Build37)
Map Location 108,461,379 - 108,622,385
singlet/doubletdoublet
Overlap geneStard10, Centd2, Pde2a
Upstream geneP4ha3, Ppme1, AU020772, Ucp3, Ucp2, Dnajb13, LOC667112, Chchd8, Mrpl48, LOC100041155, Rab6, LOC100041167, Plekhb1, B930006L02Rik, LOC100041204, Tnfrsf19l, Arhgef17, P2ry6, P2ry2, LOC100049539, EG435996, Fchsd2, EG622673, Atg16l2
Downstream geneArt2a, EG630138, Art2b, Clpb, Phox2a, Inppl1, Folr2, Folr1, 3200002M19Rik, F930017I19Rik, 2400001E08Rik, Lrrc51, LOC667222, Numa1, Il18bp, Rnf121, Trpc2, Art5, Art1, Chrna10, Nup98, Frag1, Rhog, Stim1, Rrm1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015B24.bB6Ng01-015B24.g
ACCDH849470DH849471
length8341,036
definitionDH849470|Mus musculus domesticus DNA, BAC clone: B6Ng01-015B24, 5' end.DH849471|Mus musculus domesticus DNA, BAC clone: B6Ng01-015B24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(108,621,551 - 108,622,385)(108,461,379 - 108,462,420)
sequence
gaattcctatgagaccaacgtctttagacctcaggtgtcatgacattgga
tgcccagtttggtatggggtgtatggaaggtcagaggagacaaaaaaaaa
aaaaaatagccaggttctcccctaaaggcatggggcgaggccctctctcc
tgtggctttggacttctcaagtcctgctttggccaagggatagacttgtc
atctctccaatgttggaatgggactgggtgtctctctctaggcctgggtg
gagcctcttgtctcccgctcttccattgtccccttccctcctgtgcccac
aatagataataaatgctaaatggcactgacttgacacagggcgatgtatg
gcttacagaagggcaggaagggagggctgaccaggggtgctgggcagaga
actaagtgtcccatggtacctgcctggtggttggtcctgagtgtccccag
ccctcccagtacctccccagggacctctgtgtctgcttgtcttggtgtgt
ctctttggtgtatgtcgattccacagcctcatgttgcttcctcctctgac
tgtatttgggctccatcctcacaactttggctcgtcccaactgttcccca
aatcccaggagaatgggagtatgagacatacagggacagagaccaattca
gaaacaaggaaacacgtgagagtcagaaggggataggagacaggactgtc
gaggccagaacagcccgggaagacccccaacatacaaggaaaccctttaa
ggaaacctagggagagagattccttcctctacgctgactcctgcccttct
ttcactctctctgccctgctggaatgtgtgagca
gaattcactctgtagaccaggctgaccttgaactcagatccaactgtctc
tacctcccaagtgctgggatcaaaggcgtgtgccaccaccaccccaggat
tccctttttgagatggtgtattatgtagcccacactggcttcaaacctga
agatttcttccttcctcagctccagagttctgtgtatgcatgtgcctcca
catcagccttaagaagggactcacttaaggacacatatgagttgggacag
aattggactaggatggagatctttccattacacggcagtgatcaaacatc
ttcatcaatcatttatggaatatctaatatatactctgggaagagctgtc
tgagagccaatgggagccaggcatgcagtcagccccaggttttcattaac
tctcacggtgttaatactgtaaccctggataagtcactgccgccttttca
tgtctctagttgtctctaaagtagaggtggcaagcatcatccagggctgt
ctggagggtgaactataaattaaatgagttataacctgtctagtacaaag
aacagcaccaggcatgtggtaagtaatgagtgctggttatcactgcttcc
agggaagacaggttgtggcaggctacagatggtgttcttctccagccagc
cagcagccccgtgtttgtgcatctcctccaaacttttacaacatgcctct
gggggccaacatttctggaagtaaaatgggaacttaggctttcatgtcct
cttctgtcccagggaaagagatgtctggagtgttgacaccagagagttca
catgctctgcccacctcccaggcctagagtaaagaggattctcgtctcat
gttgaatattgtatttctgaccatacagggaccagaccctggactcagtg
aaggtcctgctagtgtagggattggcgagggtcttctccctgcagtcctg
tgttttctgtgaatagagcaggcttgggtcagaggagatgaagaagtaag
caaacaggagccacaagacattaaaacttccggctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_108621551_108622385
seq2: B6Ng01-015B24.b_48_881 (reverse)

seq1  TGCTCACACATTCCAGCAGGGGCAGAGAGAGTGAAAAGAAGGGCAGGAGT  50
      |||||||||||||||||| |||||||||||||| ||||||||||||||||
seq2  TGCTCACACATTCCAGCA-GGGCAGAGAGAGTG-AAAGAAGGGCAGGAGT  48

seq1  CAGCGTAGAGG-AGGAATCTCTCCTCCCTAGGTTTCCTTAAAGGGTTTCC  99
      ||||||||||| |||||||||| |||||||||||||||||||||||||||
seq2  CAGCGTAGAGGAAGGAATCTCT-CTCCCTAGGTTTCCTTAAAGGGTTTCC  97

seq1  TTGTATGTTGGGGGTCTTCCCCGGCTGGTCCTGGCCTCGACAGTCCTGTC  149
      ||||||||||||||||||||| |||| || ||||||||||||||||||||
seq2  TTGTATGTTGGGGGTCTTCCCGGGCT-GTTCTGGCCTCGACAGTCCTGTC  146

seq1  TCCTATCCCCTTCTGACTCTCACGTGTTTCCTTGTTTCTGAATTGGTCTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATCCCCTTCTGACTCTCACGTGTTTCCTTGTTTCTGAATTGGTCTC  196

seq1  TGTCCCTGTATGTCTCATACTCCCATTCTCCTGGGATTTGGGGAACAGTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTGTATGTCTCATACTCCCATTCTCCTGGGATTTGGGGAACAGTT  246

seq1  GGGACGAGCC-AAGTTGTGAGGATGGAG-CCAAATACAGTCAGAGGAGGA  297
      |||||||||| ||||||||||||||||| |||||||||||||||||||||
seq2  GGGACGAGCCAAAGTTGTGAGGATGGAGCCCAAATACAGTCAGAGGAGGA  296

seq1  AGCAACATGAGGCTGTGGAATCGACATACACCAAAGAGACACACCAAGAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACATGAGGCTGTGGAATCGACATACACCAAAGAGACACACCAAGAC  346

seq1  AAGCAGACACAGAGGTCCCTGGGGAGGTACTGGGAGGGCTGGGGACACTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGACACAGAGGTCCCTGGGGAGGTACTGGGAGGGCTGGGGACACTC  396

seq1  AGGACCAACCACCAGGCAGGTACCATGGGACACTTAGTTCTCTGCCCAGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCAACCACCAGGCAGGTACCATGGGACACTTAGTTCTCTGCCCAGC  446

seq1  ACCCCTGGTCAGCCCTCCCTTCCTGCCCTTCTGTAAGCCATACATCGCCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTGGTCAGCCCTCCCTTCCTGCCCTTCTGTAAGCCATACATCGCCC  496

seq1  TGTGTCAAGTCAGTGCCATTTAGCATTTATTATCTATTGTGGGCACAGGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCAAGTCAGTGCCATTTAGCATTTATTATCTATTGTGGGCACAGGA  546

seq1  GGGAAGGGGACAATGGAAGAGCGGGAGACAAGAGGCTCCACCCAGGCCTA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGGGACAATGGAAGAGCGGGAGACAAGAGGCTCCACCCAGGCCTA  596

seq1  GAGAGAGACACCCAGTCCCATTCCAACATTGGAGAGATGACAAGTCTATC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGACACCCAGTCCCATTCCAACATTGGAGAGATGACAAGTCTATC  646

seq1  CCTTGGCCAAAGCAGGACTTGAGAAGTCCAAAGCCACAGGAGAGAGGGCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGCCAAAGCAGGACTTGAGAAGTCCAAAGCCACAGGAGAGAGGGCC  696

seq1  TCGCCCCATGCCTTTAGGGGAGAACCTGGCTATTTTTTTTTTTTTTTGTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCCCATGCCTTTAGGGGAGAACCTGGCTATTTTTTTTTTTTTTTGTC  746

seq1  TCCTCTGACCTTCCATACACCCCATACCAAACTGGGCATCCAATGTCATG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGACCTTCCATACACCCCATACCAAACTGGGCATCCAATGTCATG  796

seq1  ACACCTGAGGTCTAAAGACGTTGGTCTCATAGGAATTC  835
      ||||||||||||||||||||||||||||||||||||||
seq2  ACACCTGAGGTCTAAAGACGTTGGTCTCATAGGAATTC  834

seq1: chr7_108461379_108462420
seq2: B6Ng01-015B24.g_69_1104

seq1  GAATTCACTCTGTAGACCAGGCTGACCTTGAACTCAGATCCAACTGTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACCAGGCTGACCTTGAACTCAGATCCAACTGTCTC  50

seq1  TACCTCCCAAGTGCTGGGATCAAAGGCGTGTGCCACCACCACCCCAGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCCAAGTGCTGGGATCAAAGGCGTGTGCCACCACCACCCCAGGAT  100

seq1  TCCCTTTTTGAGATGGTGTATTATGTAGCCCACACTGGCTTCAAACCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTTTGAGATGGTGTATTATGTAGCCCACACTGGCTTCAAACCTGA  150

seq1  AGATTTCTTCCTTCCTCAGCTCCAGAGTTCTGTGTATGCATGTGCCTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCTTCCTTCCTCAGCTCCAGAGTTCTGTGTATGCATGTGCCTCCA  200

seq1  CATCAGCCTTAAGAAGGGACTCACTTAAGGACACATATGAGTTGGGACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGCCTTAAGAAGGGACTCACTTAAGGACACATATGAGTTGGGACAG  250

seq1  AATTGGACTAGGATGGAGATCTTTCCATTACACGGCAGTGATCAAACATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGACTAGGATGGAGATCTTTCCATTACACGGCAGTGATCAAACATC  300

seq1  TTCATCAATCATTTATGGAATATCTAATATATACTCTGGGAAGAGCTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCAATCATTTATGGAATATCTAATATATACTCTGGGAAGAGCTGTC  350

seq1  TGAGAGCCAATGGGAGCCAGGCATGCAGTCAGCCCCAGGTTTTCATTAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGCCAATGGGAGCCAGGCATGCAGTCAGCCCCAGGTTTTCATTAAC  400

seq1  TCTCACGGTGTTAATACTGTAACCCTGGATAAGTCACTGCCGCCTTTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACGGTGTTAATACTGTAACCCTGGATAAGTCACTGCCGCCTTTTCA  450

seq1  TGTCTCTAGTTGTCTCTAAAGTAGAGGTGGCAAGCATCATCCAGGGCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTAGTTGTCTCTAAAGTAGAGGTGGCAAGCATCATCCAGGGCTGT  500

seq1  CTGGAGGGTGAACTATAAATTAAATGAGTTATAACCTGTCTAGTACAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGGTGAACTATAAATTAAATGAGTTATAACCTGTCTAGTACAAAG  550

seq1  AACAGCACCAGGCATGTGGTAAGTAATGAGTGCTGGTTATCACTGCTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCACCAGGCATGTGGTAAGTAATGAGTGCTGGTTATCACTGCTTCC  600

seq1  AGGGAAGACAGGTTGTGGCAGGCTACAGATGGTGTTCTTCTCCAGCCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAGACAGGTTGTGGCAGGCTACAGATGGTGTTCTTCTCCAGCCAGC  650

seq1  CAGCAGCCCCGTGTTTGTGCATCTCCTCCAAACTTTTACAACATGCCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGCCCCGTGTTTGTGCATCTCCTCCAAACTTTTACAACATGCCTCT  700

seq1  GGGGGCCAACATTTCTGGAAGTAAAATGGGAACTTAGGCTTTCATGTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCCAACATTTCTGGAAGTAAAATGGGAACTTAGGCTTTCATGTCCT  750

seq1  CTTCTGTCCCAGGGAAAGAGATGTCTGGAGTGTTGACACCAGAGAGTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTCCCAGGGAAAGAGATGTCTGGAGTGTTGACACCAGAGAGTTCA  800

seq1  CATGCTCTGCCCACCTCCCAAGGCCTAGAGTTAAGAGGATTCTCGTCTCA  850
      ||||||||||||||||||| ||||||||||| ||||||||||||||||||
seq2  CATGCTCTGCCCACCTCCC-AGGCCTAGAGTAAAGAGGATTCTCGTCTCA  849

seq1  TGTTGAATATTGTATTTCTGACCATACAGGGACCAGACCCTGGACTCAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAATATTGTATTTCTGACCATACAGGGACCAGACCCTGGACTCAGT  899

seq1  GAAGGTCCTGCTAAGTGTAGGGA-TAGCGAGGGGTCTTCCTCCCTGCAGG  949
      |||||||||||| |||||||||| | |||| ||||||| |||||||||| 
seq2  GAAGGTCCTGCT-AGTGTAGGGATTGGCGA-GGGTCTT-CTCCCTGCAGT  946

seq1  CCTGTGTTTTCTGTGAATAGAGCAGGCTTTGGGGCAGAGGAGGATGAAAG  999
      ||||||||||||||||||||||||||| ||||| ||||||| |||| |||
seq2  CCTGTGTTTTCTGTGAATAGAGCAGGC-TTGGGTCAGAGGA-GATG-AAG  993

seq1  AGGTAGGCAGACAGGAGCCACAAGACATTAAAACTTCCGGCTG  1042
      | ||| ||| |||||||||||||||||||||||||||||||||
seq2  AAGTAAGCAAACAGGAGCCACAAGACATTAAAACTTCCGGCTG  1036