BAC Information

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BAC

Clone NameB6Ng01-015G13
Chromosome7 (Build37)
Map Location 17,984,298 - 18,085,833
singlet/doubletdoublet
Overlap genenone
Upstream geneBC057627, Tmem160, Npas1, LOC629352, Grlf1, LOC670915, LOC100038912, Ceacam15, EG666641, LOC434127, Ceacam9, Ap2s1, Slc1a5, Fkrp, Strn4, Prkd2, Dact3, Gng8, Ptgir, Calm3, EG434128, 0710005I19Rik, LOC100042835, LOC434130, Ppp5c, Hif3a, Psg16, LOC100042844, LOC640145, Ceacam3, Psg29
Downstream geneLOC414361, LOC671132, LOC100042868, Psg-ps1, LOC666767, Psg30, Ppia-ps7_184.1, Ceacam14, EG381852, Ceacam11, Ceacam13, LOC384560, Ceacam12, Igfl3, LOC671190, Mill1, Psg18, LOC546936, Psg28, LOC666831, EG574429
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015G13.bB6Ng01-015G13.g
ACCDH849674DH849675
length1,0621,059
definitionDH849674|Mus musculus domesticus DNA, BAC clone: B6Ng01-015G13, 5' end.DH849675|Mus musculus domesticus DNA, BAC clone: B6Ng01-015G13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(17,984,298 - 17,985,360)(18,084,756 - 18,085,833)
sequence
gaattctaaaaaatgtcttcaatttttatttagcagttagaataataatg
agaaaattaaaataaacatggtcagtagtgagaacttcattaagtctaaa
attatcatattcagaatttagattcgcagtgctatatgtattaaagaagt
agcaatatgcaagtagacaactttgagctgtgaagctttactttatcaag
tttaaaatattcagactcaccacgccaaatttattcctgagtattaagga
aggaggctctctaaagaagaagaagaagaagaagaagaagaagaagaaga
agaagaagaagaagaagaagaagaagaagaagaagaagaagaagttagct
ttgtagcatagcccgctctaaaagcattaggagaaagatttttgtgtcca
tgttctataatctcatcccagtcttctcactcattcacagcagaaagaaa
gggtaagcacagaaaatgaaacatggttgttcaaggtttattgttatggg
atcttctctgacgttgtgaaatcaaatgcaaattttatgtttataagttg
ttgtgttgaacaaaggttatttttcctgtttcctggtttagaatgatata
ttagaaaaatgtggactggaatgcatgtttctgttcttaggctgatttat
cccagccccacgagtaagttttagtgaaaatgtcccttgaggatattatg
taggaaattcaaaattataaattacagttaccttcaaagattagccttaa
ggagaattattgtgtaggttgataaatcctttcacagtttagtttccttt
gagaagactgaagtaattggagtctcctcaatgttattggtggggcctac
caataataaatgtagtttgaagggacattgaaacttgccactgaaaaaca
caacttacattcactcctactccttcagataggtaacttaaaatgcactt
aatgctcttaaaatttcatacaatttcaaaagaaaatcatgttgttagtg
catatgaacagttttcaccaaattgggtatctgacaatctgtgctccgag
ggggatatttta
gaattccagaatcttgggatattgttggcctgactgatagccacaaacct
cccctatggaggctcttggggaagtaacttcaacaggagccaggggtcca
ggagacatgatctaatgccttccatcccaagtatgtggaaattactaccc
accgggtcccactggggttcaagacataagctcgactggagaccagactg
tgcataccccattgccccacacatgagtaacattttgtggctaaaaacta
gaataaaaatacagatgtcttactactctataaacaggaaaatgtcccta
ataaatcatgagtatgtcaaaataagaaacaaaaatgtataggttttaat
gattccctttttctttacttgcagataaaatctccattctcctattgatc
atttgtaacttttaggacagccacagctaaggaaccataccattatgata
ctcctgtgggctgcctacattctacaagcacagctctctgataccccacc
accaccaccactaactgaattttgacctgttcttcaatgcacatccccaa
catgcttataaaagtgatggcaactatcatttcattcatttataaatttt
gtttctcattatcagaaataatattatgataaactgtattttatcaacat
agaccatattattatatatcaaaaacacctaaagaaaaataaataccaaa
atatctgtggcaaatttcatgttcatataaaatcctcatagaactgaaga
aaagaaacacatagccagcaaagcaggcagaaaattaggcttttacatgt
agatgaagtctcccaggcaatggacatttgaaattaccacaatttgaccc
aataacttcttaatgcagaagaatcttttgtgtttaatgaacatctaaca
caaaatttcaatacccaagagtttatgaaaccactatattatatgtaggt
taatttccaagaaccttcagtggtctgggatagcattacacccaggataa
tataaattaatcccaagaagattctgggggcgagatttacatagccctca
ttttgtgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_17984298_17985360
seq2: B6Ng01-015G13.b_47_1108

seq1  GAATTCTAAAAAATGTCTTCAATTTTTATTTAGCAGTTAGAATAATAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAAAAATGTCTTCAATTTTTATTTAGCAGTTAGAATAATAATG  50

seq1  AGAAAATTAAAATAAACATGGTCAGTAGTGAGAACTTCATTAAGTCTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATTAAAATAAACATGGTCAGTAGTGAGAACTTCATTAAGTCTAAA  100

seq1  ATTATCATATTCAGAATTTAGATTCGCAGTGCTATATGTATTAAAGAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCATATTCAGAATTTAGATTCGCAGTGCTATATGTATTAAAGAAGT  150

seq1  AGCAATATGCAAGTAGACAACTTTGAGCTGTGAAGCTTTACTTTATCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATATGCAAGTAGACAACTTTGAGCTGTGAAGCTTTACTTTATCAAG  200

seq1  TTTAAAATATTCAGACTCACCACGCCAAATTTATTCCTGAGTATTAAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATATTCAGACTCACCACGCCAAATTTATTCCTGAGTATTAAGGA  250

seq1  AGGAGGCTCTCTA---AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA  297
      |||||||||||||   ||||||||||||||||||||||||||||||||||
seq2  AGGAGGCTCTCTAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA  300

seq1  AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTTAGCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTTAGCT  350

seq1  TTGTAGCATAGCCCGCTCTAAAAGCATTAGGAGAAAGATTTTTGTGTCCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGCATAGCCCGCTCTAAAAGCATTAGGAGAAAGATTTTTGTGTCCA  400

seq1  TGTTCTATAATCTCATCCCAGTCTTCTCACTCATTCACAGCAGAAAGAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTATAATCTCATCCCAGTCTTCTCACTCATTCACAGCAGAAAGAAA  450

seq1  GGGTAAGCACAGAAAATGAAACATGGTTGTTCAAGGTTTATTGTTATGGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAGCACAGAAAATGAAACATGGTTGTTCAAGGTTTATTGTTATGGG  500

seq1  ATCTTCTCTGACGTTGTGAAATCAAATGCAAATTTTATGTTTATAAGTTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTCTGACGTTGTGAAATCAAATGCAAATTTTATGTTTATAAGTTG  550

seq1  TTGTGTTGAACAAAGGTTATTTTTCCTGTTTCCTGGTTTAGAATGATATA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTGAACAAAGGTTATTTTTCCTGTTTCCTGGTTTAGAATGATATA  600

seq1  TTAGAAAAATGTGGACTGGAATGCATGTTTCTGTTCTTAGGCTGATTTAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAAATGTGGACTGGAATGCATGTTTCTGTTCTTAGGCTGATTTAT  650

seq1  CCCAGCCCCACGAGTAAG-TTTAGTGAAAATGTCCCTTGAGGATATTATG  696
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCCAGCCCCACGAGTAAGTTTTAGTGAAAATGTCCCTTGAGGATATTATG  700

seq1  TAGGAAATTCAAAATTATAAATTACAGTTACCTTCAAAGATTAGCCTTAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAATTCAAAATTATAAATTACAGTTACCTTCAAAGATTAGCCTTAA  750

seq1  GGAAGAATTATTGTGTAGGTTGATAAATCCTTTCACAGTTTAGTTTTCCT  796
      || |||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GG-AGAATTATTGTGTAGGTTGATAAATCCTTTCACAGTTTAG-TTTCCT  798

seq1  TTGAGAAGACTGAAGTTAATGGAGTCTCCTCAATGTTATTGGT-GGGCCT  845
      |||||||||||||||| | |||||||||||||||||||||||| ||||||
seq2  TTGAGAAGACTGAAGTAATTGGAGTCTCCTCAATGTTATTGGTGGGGCCT  848

seq1  ACCAATAATAAATGTAGTTTGAAGGGACATTGAAACTTGCCACTGAAAAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATAATAAATGTAGTTTGAAGGGACATTGAAACTTGCCACTGAAAAA  898

seq1  CACAACTTACATCCACTCCTACTCCTTCAGATA-GTTACTTAAAATTGCA  944
      |||||||||||| |||||||||||||||||||| || |||||||| ||||
seq2  CACAACTTACATTCACTCCTACTCCTTCAGATAGGTAACTTAAAA-TGCA  947

seq1  TCTTAATGCTTCTTAAAATTTCATACAAAATTTCAAAAGAAAATCATG-T  993
       |||||||| ||||||||||||||||  |||||||||||||||||||| |
seq2  -CTTAATGC-TCTTAAAATTTCATAC--AATTTCAAAAGAAAATCATGTT  993

seq1  GTTAGTGCCATATGAACAGTTTTCACACAAATGGGTATCTGACCAACCTT  1043
      ||||||| ||||||||||||||||||  || |||||||||||| | |  |
seq2  GTTAGTG-CATATGAACAGTTTTCACCAAATTGGGTATCTGACAATC--T  1040

seq1  GTGCTCC--AGGTGATATTTTA  1063
      |||||||   || |||||||||
seq2  GTGCTCCGAGGGGGATATTTTA  1062

seq1: chr7_18084756_18085833
seq2: B6Ng01-015G13.g_69_1127 (reverse)

seq1  AACAAAAAATGGAGAGCTATGGTAAAAAATCTCGCCACAAGAATACTTCT  50
      |||| ||||| ||| ||||||     |||||||||| | ||||| |||| 
seq2  AACACAAAAT-GAGGGCTATG----TAAATCTCGCCCCCAGAAT-CTTC-  43

seq1  TTGGGATATATTTATATATTTATCCT-GGTGTAATGCTAATCCCAGAACA  99
      |||||||  |||||||   ||||||| ||||||||||| |||||||| ||
seq2  TTGGGATTAATTTATA---TTATCCTGGGTGTAATGCT-ATCCCAGACCA  89

seq1  CCTGAAGGTTCTTTGTGAAAATAAACCTACATATAATTATAGTGGTTTCA  149
       |||||||||||   || |||| ||||||||||||| |||||||||||||
seq2  -CTGAAGGTTCT---TGGAAATTAACCTACATATAA-TATAGTGGTTTCA  134

seq1  TAAACTCTTTGGGTAATTGAAATTTTTGTGTTAGATGTTCATTAAACCAC  199
      ||||||| |||||| ||||||| ||||||||||||||||||||||| |||
seq2  TAAACTC-TTGGGT-ATTGAAA-TTTTGTGTTAGATGTTCATTAAA-CAC  180

seq1  AAAAGATTCTTCTGCATTAAGAAGTTATTGGGTCAAATTGTGGTAATTTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATTCTTCTGCATTAAGAAGTTATTGGGTCAAATTGTGGTAATTTC  230

seq1  AAATGTCCATTGCCTGGGAGACTTCATCTACATGTAAAAGCCTAATTTTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCCATTGCCTGGGAGACTTCATCTACATGTAAAAGCCTAATTTTC  280

seq1  TGCCTGCTTTGCTGGCTATGTGTTTCTTTTCTTCAGTTCTATGAGGATTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCTTTGCTGGCTATGTGTTTCTTTTCTTCAGTTCTATGAGGATTT  330

seq1  TATATGAACATGAAATTTGCCACAGATATTTTGGTATTTATTTTTCTTTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGAACATGAAATTTGCCACAGATATTTTGGTATTTATTTTTCTTTA  380

seq1  GGTGTTTTTGATATATAATAATATGGTCTATGTTGATAAAATACAGTTTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTTTGATATATAATAATATGGTCTATGTTGATAAAATACAGTTTA  430

seq1  TCATAATATTATTTCTGATAATGAGAAACAAAATTTATAAATGAATGAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATATTATTTCTGATAATGAGAAACAAAATTTATAAATGAATGAAA  480

seq1  TGATAGTTGCCATCACTTTTATAAGCATGTTGGGGATGTGCATTGAAGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGTTGCCATCACTTTTATAAGCATGTTGGGGATGTGCATTGAAGAA  530

seq1  CAGGTCAAAATTCAGTTAGTGGTGGTGGTGGTGGGGTATCAGAGAGCTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCAAAATTCAGTTAGTGGTGGTGGTGGTGGGGTATCAGAGAGCTGT  580

seq1  GCTTGTAGAATGTAGGCAGCCCACAGGAGTATCATAATGGTATGGTTCCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTAGAATGTAGGCAGCCCACAGGAGTATCATAATGGTATGGTTCCT  630

seq1  TAGCTGTGGCTGTCCTAAAAGTTACAAATGATCAATAGGAGAATGGAGAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTGGCTGTCCTAAAAGTTACAAATGATCAATAGGAGAATGGAGAT  680

seq1  TTTATCTGCAAGTAAAGAAAAAGGGAATCATTAAAACCTATACATTTTTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTGCAAGTAAAGAAAAAGGGAATCATTAAAACCTATACATTTTTG  730

seq1  TTTCTTATTTTGACATACTCATGATTTATTAGGGACATTTTCCTGTTTAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTATTTTGACATACTCATGATTTATTAGGGACATTTTCCTGTTTAT  780

seq1  AGAGTAGTAAGACATCTGTATTTTTATTCTAGTTTTTAGCCACAAAATGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAGTAAGACATCTGTATTTTTATTCTAGTTTTTAGCCACAAAATGT  830

seq1  TACTCATGTGTGGGGCAATGGGGTATGCACAGTCTGGTCTCCAGTCGAGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCATGTGTGGGGCAATGGGGTATGCACAGTCTGGTCTCCAGTCGAGC  880

seq1  TTATGTCTTGAACCCCAGTGGGACCCGGTGGGTAGTAATTTCCACATACT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTCTTGAACCCCAGTGGGACCCGGTGGGTAGTAATTTCCACATACT  930

seq1  TGGGATGGAAGGCATTAGATCATGTCTCCTGGACCCCTGGCTCCTGTTGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATGGAAGGCATTAGATCATGTCTCCTGGACCCCTGGCTCCTGTTGA  980

seq1  AGTTACTTCCCCAAGAGCCTCCATAGGGGAGGTTTGTGGCTATCAGTCAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACTTCCCCAAGAGCCTCCATAGGGGAGGTTTGTGGCTATCAGTCAG  1030

seq1  GCCAACAATATCCCAAGATTCTGGAATTC  1078
      |||||||||||||||||||||||||||||
seq2  GCCAACAATATCCCAAGATTCTGGAATTC  1059